Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.7e-85 319.3 165 100.0
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.5e-84 315.5 165 98.8
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 3.0e-53 212.2 164 68.3
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.5e-52 209.9 159 69.2
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 2.0e-49 199.5 166 60.2
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 3.4e-49 198.7 160 60.6
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 5.8e-49 198.0 148 65.5
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 3.7e-48 195.3 165 59.4
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 1.1e-47 193.7 163 62.6
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 3.2e-47 192.2 160 60.0
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 7.1e-47 191.0 160 61.9
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 2.7e-46 189.1 164 57.3
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 2.7e-46 189.1 165 58.2
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 4.6e-46 188.3 165 60.6
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 7.8e-46 187.6 160 60.6
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 7.8e-46 187.6 148 63.5
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.3e-45 186.8 159 56.6
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 1.7e-45 186.4 160 60.6
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 2.3e-45 186.0 166 59.0
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 2.3e-45 186.0 153 60.1
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 6.6e-45 184.5 161 58.4
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 8.6e-45 184.1 163 54.6
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 8.6e-45 184.1 158 59.5
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 1.1e-44 183.7 153 60.1
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.9e-44 183.0 164 56.7
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 3.3e-44 182.2 148 60.8
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 9.5e-44 180.6 148 61.5
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.6e-43 179.9 163 55.2
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.6e-43 179.9 166 57.8
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.6e-43 179.9 159 56.0
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 1.6e-43 179.9 162 55.6
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 1.6e-43 179.9 162 55.6
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 1.6e-43 179.9 159 62.3
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 1.6e-43 179.9 159 62.3
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.8e-43 179.1 158 56.3
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 2.8e-43 179.1 148 60.1
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 6.2e-43 177.9 163 58.3
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 8.1e-43 177.6 159 61.6
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 1.1e-42 177.2 165 55.8
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.4e-42 176.8 165 57.6
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.4e-42 176.8 162 56.8
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 1.8e-42 176.4 153 56.2
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.8e-42 176.4 167 52.7
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 2.3e-42 176.0 159 56.6
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 2.3e-42 176.0 158 56.3
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 6.8e-42 174.5 159 57.2
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 8.9e-42 174.1 167 53.9
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 2.0e-41 172.9 140 58.6
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 2.6e-41 172.6 164 57.9
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 3.4e-41 172.2 163 55.2
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 3.4e-41 172.2 162 54.3
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 4.4e-41 171.8 157 58.0
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 1.3e-40 170.2 159 56.0
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 2.2e-40 169.5 164 54.3
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 2.2e-40 169.5 147 58.5
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 3.8e-40 168.7 164 56.7
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.1e-39 167.2 144 56.9
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 1.4e-39 166.8 151 55.0
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 1.4e-39 166.8 163 54.0
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 1.9e-39 166.4 167 52.7
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 1.9e-39 166.4 144 56.2
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 1.9e-39 166.4 167 53.9
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 2.4e-39 166.0 149 55.0
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 3.2e-39 165.6 136 57.4
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 3.2e-39 165.6 150 53.3
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 1.2e-38 163.7 162 50.6
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.2e-38 163.7 171 49.1
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 1.6e-38 163.3 141 56.7
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 2.1e-38 162.9 162 52.5
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 3.5e-38 162.2 154 57.1
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 3.5e-38 162.2 157 53.5
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 3.5e-38 162.2 144 57.6
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 6.0e-38 161.4 149 55.0
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 7.8e-38 161.0 143 55.9
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 1.3e-37 160.2 159 52.8
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 1.3e-37 160.2 141 56.7
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.7e-37 159.8 143 55.2
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 2.3e-37 159.5 143 55.9
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 3.9e-37 158.7 134 56.0
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 5.1e-37 158.3 156 53.8
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 5.1e-37 158.3 167 53.9
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 6.6e-37 157.9 154 53.2
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 8.6e-37 157.5 143 53.8
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 8.6e-37 157.5 156 50.6
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.5e-36 156.8 135 57.0
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 2.5e-36 156.0 166 52.4
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 2.5e-36 156.0 146 52.7
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 3.3e-36 155.6 161 50.9
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 7.3e-36 154.5 158 51.3
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 1.6e-35 153.3 143 54.5
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 2.1e-35 152.9 161 52.2
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 3.6e-35 152.1 171 49.7
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 2.4e-34 149.4 151 51.7
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 3.1e-34 149.1 159 50.9
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 3.1e-34 149.1 160 49.4
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 4.0e-34 148.7 161 49.7
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 4.0e-34 148.7 167 50.3
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 8.9e-34 147.5 129 59.7
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 1.2e-33 147.1 151 50.3
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 5.8e-33 144.8 137 52.6
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 6.4e-32 141.4 126 59.5
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 6.4e-32 141.4 126 58.7
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 8.4e-32 141.0 111 62.2
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.2e-30 137.1 116 61.2
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 2.7e-30 136.0 140 50.0
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 7.8e-30 134.4 129 55.8
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 3.0e-29 132.5 147 49.0
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 8.7e-29 131.0 171 43.3
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 8.7e-29 131.0 159 45.3
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 9.6e-28 127.5 129 55.8
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 4.5e-25 118.6 148 46.6
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 1.3e-24 117.1 138 40.6
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 6.4e-24 114.8 153 40.5
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 2.3e-21 106.3 77 63.6
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 5.1e-21 105.1 148 41.2
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 4.3e-20 102.1 131 42.7
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 7.4e-20 101.3 150 37.3
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 4.0e-18 95.5 90 53.3
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 4.5e-17 92.0 113 40.7
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 6.4e-16 88.2 90 53.3
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 1.9e-15 86.7 144 36.8
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 3.2e-15 85.9 125 40.0
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 2.1e-14 83.2 151 33.8
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 1.1e-12 77.4 133 35.3
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 8.1e-11 71.2 63 57.1
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.4e-10 70.5 90 47.8
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 1.5e-09 67.0 72 52.8
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 1.5e-09 67.0 88 40.9
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 3.4e-09 65.9 75 46.7


User provided reference genes

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