Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 1.1e-130 469.9 234 100.0
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 7.4e-42 174.9 225 44.0
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 3.8e-38 162.5 209 47.4
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 5.0e-38 162.2 208 47.1
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 5.2e-35 152.1 243 42.4
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 6.7e-35 151.8 223 43.0
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 4.4e-34 149.1 227 42.7
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 1.3e-33 147.5 268 38.4
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 6.3e-33 145.2 235 40.4
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 6.3e-33 145.2 261 37.9
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 2.4e-32 143.3 241 40.7
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 5.3e-32 142.1 220 44.1
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 7.0e-32 141.7 242 40.1
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 1.2e-31 141.0 265 38.1
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 3.5e-31 139.4 238 38.7
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 7.7e-31 138.3 224 41.1
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 2.2e-30 136.7 234 40.2
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 3.8e-30 136.0 224 39.3
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 6.5e-30 135.2 236 39.4
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.1e-29 134.4 231 40.3
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 2.5e-29 133.3 222 40.1
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 3.2e-29 132.9 233 39.5
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 4.7e-28 129.0 203 42.4
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 8.0e-28 128.3 245 37.1
PSO339G2888 Papaver somniferum HOM05D007911 ORTHO05D009536 9.7e-26 121.3 165 44.8
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 1.7e-25 120.6 199 40.7
Aqoxy1G00297 Aquilegia oxysepala HOM05D007911 ORTHO05D009536 2.2e-25 120.2 194 42.3
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 4.8e-25 119.0 243 35.8
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 8.2e-25 118.2 223 35.9
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 1.4e-24 117.5 215 40.9
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 3.1e-24 116.3 215 40.5
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 3.1e-24 116.3 119 52.9
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 1.6e-23 114.0 118 53.4
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 1.6e-23 114.0 216 35.6
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 3.5e-23 112.8 155 46.5
PSO384G4398 Papaver somniferum HOM05D007911 ORTHO05D009536 1.0e-22 111.3 165 43.0
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 1.3e-22 110.9 239 35.6
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 2.2e-22 110.2 245 34.3
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 2.2e-22 110.2 201 37.8
Lalb_Chr01g0017411 Lupinus albus HOM05D007911 ORTHO05D009536 2.9e-22 109.8 182 39.0
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 3.8e-22 109.4 225 34.7
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 3.8e-22 109.4 238 34.5
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 5.0e-22 109.0 201 38.8
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 6.5e-22 108.6 235 35.3
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 1.9e-21 107.1 236 34.3
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 4.2e-21 105.9 152 39.5
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 4.2e-21 105.9 172 39.5
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 2.1e-20 103.6 188 37.8
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 8.0e-20 101.7 152 42.1
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 1.0e-19 101.3 130 43.1
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 2.3e-19 100.1 236 33.5
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 4.0e-19 99.4 120 45.8
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 5.2e-19 99.0 189 37.0
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 5.7e-18 95.5 149 40.9
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 9.8e-18 94.7 202 38.1
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 9.8e-18 94.7 197 34.5
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 9.8e-18 94.7 197 34.5
FAN09G4584 Fragaria x ananassa HOM05D020102 ORTHO05D009536 1.3e-17 94.4 223 35.0
AUR62026093 Chenopodium quinoa HOM05D021336 ORTHO05D009536 1.7e-17 94.0 221 30.3
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 1.7e-17 94.0 219 33.3
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 3.7e-17 92.8 243 32.5
EL10Ac3g07134 Beta vulgaris HOM05D021336 ORTHO05D009536 1.1e-16 91.3 140 36.4
Sed0016742 Sechium edule HOM05D007911 ORTHO05D009536 1.1e-16 91.3 161 38.5
AUR62024506 Chenopodium quinoa HOM05D021336 ORTHO05D009536 1.4e-16 90.9 205 30.2
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 1.4e-16 90.9 165 40.6
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 5.4e-16 89.0 133 40.6
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 1.2e-15 87.8 212 34.4
FvH4_6g24470 Fragaria vesca HOM05D020102 ORTHO05D009536 2.0e-15 87.0 230 32.2
FAN14G4000 Fragaria x ananassa HOM05D020102 ORTHO05D009536 2.0e-15 87.0 230 32.2
FAN05G5247 Fragaria x ananassa HOM05D020102 ORTHO05D009536 2.7e-15 86.7 211 32.7
Medtr2g012890 Medicago truncatula HOM05D007911 ORTHO05D009536 1.0e-14 84.7 155 36.1
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 1.3e-14 84.3 187 36.4
SGA_v2.0_scaffold105G30375 Striga asiatica HOM05D007911 ORTHO05D009536 1.3e-14 84.3 193 31.6
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 1.3e-14 84.3 104 48.1
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 2.9e-14 83.2 235 31.9
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 1.9e-13 80.5 173 35.8
Hund24682 Selenicereus undatus HOM05D007911 ORTHO05D009536 5.5e-13 79.0 129 34.9
Ah.04g151450 Amaranthus hybridus HOM05D021336 ORTHO05D009536 2.8e-12 76.6 202 30.2
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 3.6e-12 76.3 165 37.0
Hund19135 Selenicereus undatus HOM05D021336 ORTHO05D009536 4.7e-12 75.9 127 33.9
HanXRQChr08g0234551 Helianthus annuus HOM05D007911 ORTHO05D009536 4.4e-10 69.3 208 33.7
SGA_v2.0_scaffold69G23124 Striga asiatica HOM05D007911 ORTHO05D009536 4.4e-10 69.3 143 35.7
ECA247G2582 Erigeron canadensis HOM05D007911 ORTHO05D009536 5.7e-10 68.9 228 31.1
Nitab4.5_0000677g0260 Nicotiana tabacum HOM05D029882 ORTHO05D009536 5.7e-10 68.9 112 42.0
Sc13g0001600 Simmondsia chinensis HOM05D007911 ORTHO05D009536 1.7e-09 67.4 190 32.1
GSVIVG01033236001 Vitis vinifera HOM05D007911 ORTHO05D009536 4.5e-07 59.3 117 34.2


User provided reference genes

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