Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 4.8e-106 387.9 200 100.0
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 1.0e-55 220.7 162 71.6
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 2.2e-55 219.5 164 70.1
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 6.5e-55 218.0 165 71.5
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 8.5e-55 217.6 163 68.7
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.8e-52 209.9 165 67.9
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 4.0e-52 208.8 163 67.5
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 6.8e-52 208.0 163 66.9
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 6.8e-52 208.0 163 69.9
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 3.4e-51 205.7 163 69.3
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 7.5e-51 204.5 159 70.4
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.4e-49 200.3 165 64.8
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 1.8e-49 199.9 147 71.4
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 2.7e-48 196.1 153 69.3
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 2.7e-48 196.1 171 65.5
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 5.9e-48 194.9 126 77.0
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 1.3e-47 193.7 146 71.9
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 3.8e-47 192.2 148 68.9
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 5.0e-47 191.8 150 68.0
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 5.0e-47 191.8 165 66.1
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 6.5e-47 191.4 126 80.2
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 1.5e-46 190.3 163 63.8
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 3.3e-46 189.1 164 64.0
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 3.3e-46 189.1 167 64.7
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 3.6e-45 185.7 164 61.0
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 6.1e-45 184.9 164 62.8
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 8.0e-45 184.5 162 61.1
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 8.0e-45 184.5 164 61.6
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.0e-44 184.1 133 71.4
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.4e-44 183.7 163 62.0
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 1.8e-44 183.3 125 73.6
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 2.3e-44 183.0 149 67.8
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.3e-44 183.0 164 59.8
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 3.0e-44 182.6 166 62.0
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 5.2e-44 181.8 126 73.8
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.8e-44 181.4 141 65.2
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 8.9e-44 181.0 126 73.8
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 8.9e-44 181.0 169 63.3
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 8.9e-44 181.0 148 63.5
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 1.5e-43 180.3 143 71.3
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 1.5e-43 180.3 143 71.3
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 1.5e-43 180.3 143 71.3
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 1.5e-43 180.3 127 74.0
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 2.0e-43 179.9 143 71.3
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 2.0e-43 179.9 143 71.3
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 5.7e-43 178.3 148 62.8
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 7.5e-43 177.9 152 65.8
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 7.5e-43 177.9 166 57.8
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 1.3e-42 177.2 172 62.2
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 2.8e-42 176.0 133 69.2
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 3.7e-42 175.6 164 60.4
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 6.3e-42 174.9 171 60.2
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 6.3e-42 174.9 126 72.2
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 8.3e-42 174.5 125 67.2
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.1e-41 174.1 173 56.6
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 1.1e-41 174.1 132 68.9
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 3.1e-41 172.6 164 57.9
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 7.0e-41 171.4 165 57.0
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 1.6e-40 170.2 167 58.7
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 1.6e-40 170.2 155 59.4
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 1.6e-40 170.2 164 57.9
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 1.7e-39 166.8 165 57.6
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 2.3e-39 166.4 143 62.9
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 2.3e-39 166.4 138 65.2
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 2.9e-39 166.0 129 66.7
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 3.8e-39 165.6 166 57.2
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 3.8e-39 165.6 166 57.2
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 3.8e-39 165.6 167 57.5
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 1.1e-38 164.1 126 67.5
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 3.3e-38 162.5 101 78.2
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 1.6e-37 160.2 164 57.3
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 1.6e-37 160.2 121 70.2
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 3.6e-37 159.1 145 61.4
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 8.0e-37 157.9 145 61.4
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 1.0e-36 157.5 137 62.8
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 6.8e-36 154.8 128 64.1
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.5e-35 153.7 123 65.0
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 1.5e-35 153.7 97 77.3
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 1.7e-34 150.2 168 54.8
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.7e-34 150.2 117 70.9
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 1.8e-33 146.7 161 54.0
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 4.1e-33 145.6 137 60.6
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 9.2e-33 144.4 168 55.4
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 1.7e-31 140.2 118 64.4
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 3.9e-31 139.0 104 72.1
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 4.7e-29 132.1 130 55.4
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 3.1e-28 129.4 100 65.0
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 3.1e-28 129.4 161 46.6
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 1.5e-27 127.1 113 64.6
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 3.4e-27 125.9 121 52.1
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 2.4e-25 119.8 146 41.8
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 7.0e-25 118.2 97 69.1
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 3.5e-24 115.9 116 56.0
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 1.5e-22 110.5 161 46.6
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 4.3e-22 109.0 71 64.8
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 3.6e-21 105.9 112 50.9
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 4.4e-19 99.0 57 78.9
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 5.8e-19 98.6 114 44.7
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 6.4e-18 95.1 116 51.7
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 7.8e-16 88.2 119 43.7
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 1.3e-15 87.4 149 36.9
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 5.6e-14 82.0 117 41.9
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 3.6e-13 79.3 166 36.7
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 4.7e-13 79.0 69 59.4
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 8.4e-10 68.2 125 40.8
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 2.4e-09 66.6 106 42.5


User provided reference genes

Program Settings