Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1872 Trochodendron aralioides HOM05D000085 ORTHO05D034829 2.7e-118 428.7 218 100.0
Nn2g10833 Nelumbo nucifera HOM05D000085 ORTHO05D007399 3.6e-30 136.0 124 58.9
TAR633G1225 Trochodendron aralioides HOM05D000085 ORTHO05D007399 1.8e-29 133.7 81 76.5
Nn2g13129 Nelumbo nucifera HOM05D000085 ORTHO05D007399 5.1e-29 132.1 114 55.3
MBI10_g24935_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D007399 8.8e-29 131.3 110 63.6
CSS0046449 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D007399 5.7e-28 128.6 110 60.0
Dinv32722 Davidia involucrata HOM05D000085 ORTHO05D007399 5.7e-28 128.6 109 61.5
GSVIVG01025212001 Vitis vinifera HOM05D000085 ORTHO05D007399 9.7e-28 127.9 104 62.5
QL01p021498 Quercus lobata HOM05D000085 ORTHO05D007399 1.7e-27 127.1 120 53.3
Thecc.09G343500 Theobroma cacao HOM05D000085 ORTHO05D007399 3.7e-27 125.9 115 52.2
Duzib168G1096 Durio zibethinus HOM05D000085 ORTHO05D007399 1.1e-26 124.4 114 50.0
Potri.009G010400 Populus trichocarpa HOM05D000085 ORTHO05D007399 9.1e-26 121.3 114 56.1
Hma1.2p1_0307F.1_g119860 Hydrangea macrophylla HOM05D000085 ORTHO05D007399 1.2e-25 120.9 99 57.6
PSO063G7178 Papaver somniferum HOM05D000085 ORTHO05D007399 1.2e-25 120.9 134 49.3
Rhsim13G0096000 Rhododendron simsii HOM05D000085 ORTHO05D007399 4.5e-25 119.0 119 51.3
Aqoxy1G01213 Aquilegia oxysepala HOM05D000085 ORTHO05D007399 2.2e-24 116.7 104 54.8
Duzib170G0240 Durio zibethinus HOM05D000085 ORTHO05D007399 5.0e-24 115.5 114 51.8
Atru.chr3.3603 Acer truncatum HOM05D000085 ORTHO05D007399 6.5e-24 115.2 113 57.5
Sabra04G0143700 Salix brachista HOM05D000085 ORTHO05D007399 6.5e-24 115.2 128 47.7
Lj2C1022G2 Lonicera japonica HOM05D000085 ORTHO05D007399 1.9e-23 113.6 117 50.4
Potri.004G212600 Populus trichocarpa HOM05D000085 ORTHO05D007399 3.2e-23 112.8 114 54.4
Gohir.D05G104600 Gossypium hirsutum HOM05D000085 ORTHO05D007399 4.2e-23 112.5 114 52.6
TWI31G1473 Tripterygium wilfordii HOM05D000085 ORTHO05D007399 1.2e-22 110.9 114 48.2
CiPaw.14G084900 Carya illinoinensis HOM05D000085 ORTHO05D007399 2.7e-22 109.8 103 52.4
Manes.11G147400 Manihot esculenta HOM05D000085 ORTHO05D007399 2.7e-22 109.8 105 58.1
COL.COLO4_18308 Corchorus olitorius HOM05D000085 ORTHO05D034829 1.0e-21 107.8 133 44.4
Prupe.6G104400 Prunus persica HOM05D000085 ORTHO05D007399 1.4e-21 107.5 89 62.9
FAN25G1889 Fragaria x ananassa HOM05D000085 ORTHO05D007399 1.8e-21 107.1 121 45.5
CiPaw.13G116000 Carya illinoinensis HOM05D000085 ORTHO05D007399 2.3e-21 106.7 120 48.3
Gohir.D03G136300 Gossypium hirsutum HOM05D000085 ORTHO05D007399 3.0e-21 106.3 104 49.0
RcHm_v2.0_Chr5g0058481 Rosa chinensis HOM05D000085 ORTHO05D007399 3.9e-21 105.9 84 65.5
Gohir.A03G032000 Gossypium hirsutum HOM05D000085 ORTHO05D007399 5.2e-21 105.5 104 49.0
PSO339G3196 Papaver somniferum HOM05D000085 ORTHO05D007399 5.2e-21 105.5 121 46.3
Gorai.003G143400 Gossypium raimondii HOM05D000085 ORTHO05D007399 6.7e-21 105.1 104 48.1
FAN11G0716 Fragaria x ananassa HOM05D000085 ORTHO05D007399 8.8e-21 104.8 113 45.1
Gohir.A05G104800 Gossypium hirsutum HOM05D000085 ORTHO05D007399 1.1e-20 104.4 114 50.0
FAN21G2580 Fragaria x ananassa HOM05D000085 ORTHO05D007399 5.7e-20 102.1 84 61.9
TPR.G6165 Trifolium pratense HOM05D000085 ORTHO05D007399 7.4e-20 101.7 114 47.4
FvH4_3g31760 Fragaria vesca HOM05D000085 ORTHO05D007399 1.3e-19 100.9 84 60.7
Ca_19287_v3 Cicer arietinum L. HOM05D000085 ORTHO05D007399 2.2e-19 100.1 103 48.5
Cpa.g.sc65.8 Carica papaya HOM05D000085 ORTHO05D007399 2.8e-19 99.8 84 59.5
Ciclev10028017m.g Citrus clementina HOM05D000085 ORTHO05D007399 2.8e-19 99.8 107 46.7
Psat7g192120 Pisum sativum HOM05D000085 ORTHO05D007399 3.7e-19 99.4 114 46.5
CANSAT54G1211 Cannabis sativa HOM05D000085 ORTHO05D007399 8.2e-19 98.2 101 52.5
ECA238G1668 Erigeron canadensis HOM05D000085 ORTHO05D007399 1.4e-18 97.4 122 43.4
Actinidia07150 Actinidia chinensis HOM05D000085 ORTHO05D007399 3.1e-18 96.3 67 62.7
Glyma.11G144800 Glycine max HOM05D000085 ORTHO05D007399 3.1e-18 96.3 103 46.6
Haze_23781 Corylus avellana HOM05D000085 ORTHO05D007399 5.3e-18 95.5 120 47.5
MD03G1120900 Malus domestica HOM05D000085 ORTHO05D007399 5.3e-18 95.5 84 63.1
Lalb_Chr19g0137141 Lupinus albus HOM05D000085 ORTHO05D007399 9.1e-18 94.7 120 45.8
Medtr4g058710 Medicago truncatula HOM05D000085 ORTHO05D007399 2.0e-17 93.6 120 44.2
Lj3g0016965 Lotus japonicus HOM05D000085 ORTHO05D007399 2.6e-17 93.2 103 46.6
Glyma.12G077300 Glycine max HOM05D000085 ORTHO05D007399 1.3e-16 90.9 103 44.7
Cfa011298 Carpinus fangiana HOM05D000085 ORTHO05D007399 2.9e-16 89.7 86 55.8
Glyma.12G175300 Glycine max HOM05D000085 ORTHO05D007399 2.9e-16 89.7 103 48.5
Gorai.009G108700 Gossypium raimondii HOM05D000085 ORTHO05D007399 2.9e-16 89.7 91 48.4
Lalb_Chr03g0027491 Lupinus albus HOM05D000085 ORTHO05D007399 3.8e-16 89.4 121 43.8
MD11G1139700 Malus domestica HOM05D000085 ORTHO05D007399 5.0e-16 89.0 84 60.7
Oeu002986.1 Olea europaea HOM05D000085 ORTHO05D007399 5.0e-16 89.0 107 47.7
vmacro03212 Vaccinium macrocarpon HOM05D000085 ORTHO05D007399 8.5e-16 88.2 136 40.4
Lj1A202G34 Lonicera japonica HOM05D000085 ORTHO05D007399 3.2e-15 86.3 108 45.4
Cc01_g10910 Coffea canephora HOM05D000085 ORTHO05D007399 4.2e-15 85.9 116 37.9
DCAR_015525 Daucus carota HOM05D000122 ORTHO05D000537 7.2e-15 85.1 92 47.8
ATR0048G033 Amborella trichopoda HOM05D000085 ORTHO05D007399 2.1e-14 83.6 87 54.0
arahy.Tifrunner.gnm1.ann1.S3RXGN Arachis hypogaea HOM05D000085 ORTHO05D007399 2.1e-14 83.6 103 42.7
CsaV3_6G014020 Cucumis sativus L. HOM05D000085 ORTHO05D007399 2.1e-14 83.6 80 53.8
TAR371G1063 Trochodendron aralioides HOM05D001418 ORTHO05D003474 2.1e-14 83.6 44 86.4
ClCG02G021270 Citrullus lanatus HOM05D000085 ORTHO05D007399 2.7e-14 83.2 80 55.0
Eucgr.B02517 Eucalyptus grandis HOM05D000085 ORTHO05D007399 2.7e-14 83.2 120 40.8
MSTRG.21110 Avicennia marina HOM05D000085 ORTHO05D007399 3.6e-14 82.8 107 47.7
Oeu001286.1 Olea europaea HOM05D000085 ORTHO05D007399 3.6e-14 82.8 109 41.3
arahy.Tifrunner.gnm1.ann1.53VNJX Arachis hypogaea HOM05D000085 ORTHO05D007399 4.7e-14 82.4 103 41.7
Phvul.011G081200 Phaseolus vulgaris HOM05D000085 ORTHO05D007399 6.1e-14 82.0 77 54.5
SGA_v2.0_scaffold180G39642 Striga asiatica HOM05D000085 ORTHO05D007399 8.0e-14 81.6 107 39.3
VMungo1127G0218 Vigna mungo HOM05D000085 ORTHO05D007399 8.0e-14 81.6 100 42.0
Sopen11g028300 Solanum pennellii HOM05D000085 ORTHO05D007399 1.4e-13 80.9 112 41.1
PGSC0003DMG400008090 Solanum tuberosum HOM05D000085 ORTHO05D007399 1.4e-13 80.9 115 40.0
Migut.D02242 Erythranthe guttata HOM05D000085 ORTHO05D007399 1.8e-13 80.5 122 42.6
Phvul.005G133700 Phaseolus vulgaris HOM05D000085 ORTHO05D007399 1.8e-13 80.5 103 44.7
Sed0004551 Sechium edule HOM05D000085 ORTHO05D007399 1.8e-13 80.5 73 54.8
Lj3g0027655 Lotus japonicus HOM05D000085 ORTHO05D007399 3.0e-13 79.7 103 45.6
FAN16G2702 Fragaria x ananassa HOM05D000085 ORTHO05D007399 4.0e-13 79.3 84 51.2
Solyc11g069590.2 Solanum lycopersicum HOM05D000085 ORTHO05D007399 4.0e-13 79.3 115 39.1
Nitab4.5_0000602g0040 Nicotiana tabacum HOM05D000085 ORTHO05D007399 5.2e-13 79.0 114 41.2
VMungo1080G0191 Vigna mungo HOM05D000085 ORTHO05D007399 5.2e-13 79.0 103 45.6
Ca_01381_v3 Cicer arietinum L. HOM05D000085 ORTHO05D007399 6.7e-13 78.6 120 40.0
Ca_01397_v3 Cicer arietinum L. HOM05D000085 ORTHO05D007399 6.7e-13 78.6 120 40.0
MELO3C025783.2 Cucumis melo HOM05D000085 ORTHO05D007399 8.8e-13 78.2 80 52.5
Psat5g278880 Pisum sativum HOM05D000085 ORTHO05D007399 1.2e-12 77.8 83 47.0
Nitab4.5_0010514g0010 Nicotiana tabacum HOM05D000085 ORTHO05D007399 2.0e-12 77.0 123 39.0
EL10Ac9g22550 Beta vulgaris HOM05D000085 ORTHO05D007399 4.4e-12 75.9 112 40.2
Medtr2g094910 Medicago truncatula HOM05D000085 ORTHO05D007399 5.7e-12 75.5 80 47.5
Peaxi162Scf00948g00019 Petunia axillaris HOM05D000085 ORTHO05D007399 2.2e-11 73.6 86 46.5
Hund24741 Selenicereus undatus HOM05D000085 ORTHO05D007399 2.2e-11 73.6 107 41.1
TPR.G11487 Trifolium pratense HOM05D000085 ORTHO05D007399 2.2e-11 73.6 81 50.6
AUR62029231 Chenopodium quinoa HOM05D000085 ORTHO05D007399 3.7e-11 72.8 93 43.0
SalBow3G3888 Salvia bowleyana HOM05D000085 ORTHO05D007399 6.3e-11 72.0 107 40.2
THA.LOC104800595 Tarenaya hassleriana HOM05D000085 ORTHO05D007399 1.4e-10 70.9 114 31.6
AUR62022779 Chenopodium quinoa HOM05D000703 ORTHO05D007399 1.8e-10 70.5 107 40.2
COL.COLO4_18309 Corchorus olitorius HOM05D000085 ORTHO05D158467 3.1e-10 69.7 50 64.0
CAN.G631.43 Capsicum annuum HOM05D000085 ORTHO05D007399 7.0e-10 68.6 114 35.1
Lalb_Chr24g0394731 Lupinus albus HOM05D000085 ORTHO05D007399 9.1e-10 68.2 111 38.7
arahy.Tifrunner.gnm1.ann1.Q0HNET Arachis hypogaea HOM05D000085 ORTHO05D007399 1.0e-08 64.7 50 62.0
arahy.Tifrunner.gnm1.ann1.MEY6QL Arachis hypogaea HOM05D000085 ORTHO05D007399 2.9e-08 63.2 50 62.0
CDE04G0017 Ceratophyllum demersum HOM05D000085 ORTHO05D007399 5.0e-08 62.4 119 35.3
A07p18780 Brassica napus HOM05D000085 ORTHO05D007399 6.5e-08 62.0 114 37.7
BcaC02g10958 Brassica carinata HOM05D000085 ORTHO05D007399 1.9e-07 60.5 114 35.1
C04p23270 Brassica napus HOM05D000085 ORTHO05D007399 1.9e-07 60.5 114 35.1
BraA07t29587Z Brassica rapa HOM05D000085 ORTHO05D007399 2.5e-07 60.1 114 32.5
Sc06g0010350 Simmondsia chinensis HOM05D000085 ORTHO05D007399 3.2e-07 59.7 65 46.2
DCAR_006067 Daucus carota HOM05D000085 ORTHO05D007399 4.2e-07 59.3 109 39.4
MSTRG.18673 Avicennia marina HOM05D000085 ORTHO05D007399 1.2e-06 57.8 90 46.7
BolC4t23829H Brassica oleracea HOM05D000085 ORTHO05D007399 2.1e-06 57.0 114 34.2
Lalb_Chr01g0004441 Lupinus albus HOM05D000085 ORTHO05D007399 2.1e-06 57.0 58 48.3


User provided reference genes

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