Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1865 Trochodendron aralioides HOM05D000149 ORTHO05D000076 1.7e-27 125.2 60 100.0
TAR628G1215 Trochodendron aralioides HOM05D000149 ORTHO05D000076 7.1e-13 76.6 66 60.6
Eucgr.I02408 Eucalyptus grandis HOM05D000149 ORTHO05D000076 7.3e-10 66.6 66 50.0
CiPaw.07G048300 Carya illinoinensis HOM05D000149 ORTHO05D000076 9.5e-10 66.2 76 50.0
Hma1.2p1_1297F.1_g274070 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 9.5e-10 66.2 66 51.5
Cfa006892 Carpinus fangiana HOM05D000149 ORTHO05D000076 1.2e-09 65.9 75 46.7
Haze_03859 Corylus avellana HOM05D000149 ORTHO05D000076 1.2e-09 65.9 75 46.7
Dinv13494 Davidia involucrata HOM05D000149 ORTHO05D000076 1.6e-09 65.5 75 48.0
QL06p035586 Quercus lobata HOM05D000149 ORTHO05D000076 1.6e-09 65.5 69 50.7
Thecc.01G031100 Theobroma cacao HOM05D000149 ORTHO05D000076 3.6e-09 64.3 75 44.0
Cc07_g09900 Coffea canephora HOM05D000149 ORTHO05D000076 1.1e-08 62.8 75 50.7
COL.COLO4_22033 Corchorus olitorius HOM05D000149 ORTHO05D000076 1.1e-08 62.8 75 44.0
Dinv40017 Davidia involucrata HOM05D000149 ORTHO05D000076 1.4e-08 62.4 66 51.5
AUR62004090 Chenopodium quinoa HOM05D000149 ORTHO05D000076 1.8e-08 62.0 67 52.2
QL06p047163 Quercus lobata HOM05D000149 ORTHO05D000076 4.0e-08 60.8 66 50.0
FvH4_1g12770 Fragaria vesca HOM05D000149 ORTHO05D000076 5.2e-08 60.5 67 50.7
FAN19G2478 Fragaria x ananassa HOM05D000149 ORTHO05D000076 5.2e-08 60.5 67 50.7
FAN26G1989 Fragaria x ananassa HOM05D000149 ORTHO05D000076 5.2e-08 60.5 67 50.7
Lj2A456T59 Lonicera japonica HOM05D000149 ORTHO05D000076 5.2e-08 60.5 69 49.3
EL10As8g23911 Beta vulgaris HOM05D000149 ORTHO05D000076 6.8e-08 60.1 67 49.3
Duzib147G0881 Durio zibethinus HOM05D000149 ORTHO05D000076 6.8e-08 60.1 75 44.0
Duzib187G0725 Durio zibethinus HOM05D000149 ORTHO05D000076 6.8e-08 60.1 75 44.0
FAN23G2772 Fragaria x ananassa HOM05D000149 ORTHO05D000076 8.9e-08 59.7 67 50.7
Actinidia19201 Actinidia chinensis HOM05D000149 ORTHO05D000076 1.2e-07 59.3 75 44.0
AUR62007602 Chenopodium quinoa HOM05D000149 ORTHO05D000076 1.2e-07 59.3 67 50.7
Gohir.A10G096300 Gossypium hirsutum HOM05D000149 ORTHO05D000076 1.2e-07 59.3 75 44.0
Gohir.D10G091800 Gossypium hirsutum HOM05D000149 ORTHO05D000076 1.2e-07 59.3 75 44.0
Gorai.011G100800 Gossypium raimondii HOM05D000149 ORTHO05D000076 1.2e-07 59.3 75 44.0
RcHm_v2.0_Chr2g0100891 Rosa chinensis HOM05D000149 ORTHO05D000076 1.2e-07 59.3 67 49.3
FAN28G1737 Fragaria x ananassa HOM05D000149 ORTHO05D000076 1.5e-07 58.9 67 49.3
Nn5g29677 Nelumbo nucifera HOM05D000149 ORTHO05D000076 2.0e-07 58.5 73 45.2
Aqoxy6G01167 Aquilegia oxysepala HOM05D000149 ORTHO05D000076 2.6e-07 58.2 67 47.8
Gohir.A12G063200 Gossypium hirsutum HOM05D000149 ORTHO05D000076 2.6e-07 58.2 75 41.3
vmacro17809 Vaccinium macrocarpon HOM05D000149 ORTHO05D000076 2.6e-07 58.2 66 48.5
Sopen02g029620 Solanum pennellii HOM05D000149 ORTHO05D000076 3.4e-07 57.8 66 48.5
TWI73G1101 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 3.4e-07 57.8 66 43.9
Nitab4.5_0003001g0040 Nicotiana tabacum HOM05D000149 ORTHO05D000076 4.4e-07 57.4 66 48.5
Nitab4.5_0005980g0020 Nicotiana tabacum HOM05D000149 ORTHO05D000076 4.4e-07 57.4 66 48.5
Solyc02g084950.3 Solanum lycopersicum HOM05D000149 ORTHO05D000076 4.4e-07 57.4 66 48.5
PGSC0003DMG400003607 Solanum tuberosum HOM05D000149 ORTHO05D000076 4.4e-07 57.4 66 48.5
Gorai.008G066300 Gossypium raimondii HOM05D000149 ORTHO05D000076 7.6e-07 56.6 75 40.0
Nitab4.5_0001525g0070 Nicotiana tabacum HOM05D000149 ORTHO05D000076 7.6e-07 56.6 76 43.4
CAN.G358.45 Capsicum annuum HOM05D000149 ORTHO05D000076 9.9e-07 56.2 66 47.0
Ca_05025_v3 Cicer arietinum L. HOM05D000149 ORTHO05D000076 9.9e-07 56.2 66 45.5
MD15G1256500 Malus domestica HOM05D000149 ORTHO05D000076 1.3e-06 55.8 67 49.3
Nitab4.5_0000136g0270 Nicotiana tabacum HOM05D000149 ORTHO05D000076 1.3e-06 55.8 67 47.8
Sed0004280 Sechium edule HOM05D000149 ORTHO05D000076 1.3e-06 55.8 66 43.9
BcaC01g00465 Brassica carinata HOM05D000149 ORTHO05D000076 1.7e-06 55.5 68 41.2
A08p22160 Brassica napus HOM05D000149 ORTHO05D000076 1.7e-06 55.5 68 41.2
C03p80160 Brassica napus HOM05D000149 ORTHO05D000076 1.7e-06 55.5 68 41.2
BraA08t34176Z Brassica rapa HOM05D000149 ORTHO05D000076 1.7e-06 55.5 68 41.2
Prupe.7G158400 Prunus persica HOM05D000149 ORTHO05D000076 2.2e-06 55.1 67 52.2
Ah.03g141150 Amaranthus hybridus HOM05D000149 ORTHO05D000076 2.9e-06 54.7 72 44.4
MSTRG.3835 Avicennia marina HOM05D000149 ORTHO05D000076 2.9e-06 54.7 65 44.6
CANSAT01G2529 Cannabis sativa HOM05D000149 ORTHO05D000076 2.9e-06 54.7 68 48.5
BcaNung00730 Brassica carinata HOM05D000149 ORTHO05D000076 3.7e-06 54.3 75 41.3
A01p02380 Brassica napus HOM05D000149 ORTHO05D000076 3.7e-06 54.3 75 41.3
C01p02590 Brassica napus HOM05D000149 ORTHO05D000076 3.7e-06 54.3 75 41.3
BolC1t00247H Brassica oleracea HOM05D000149 ORTHO05D000076 3.7e-06 54.3 75 41.3
BolC3t20272H Brassica oleracea HOM05D000149 ORTHO05D000076 3.7e-06 54.3 68 39.7
BraA01t00226Z Brassica rapa HOM05D000149 ORTHO05D000076 3.7e-06 54.3 75 41.3
CANSAT01G2884 Cannabis sativa HOM05D000149 ORTHO05D000076 3.7e-06 54.3 69 47.8
Medtr5g046110 Medicago truncatula HOM05D000149 ORTHO05D000076 3.7e-06 54.3 66 43.9
Rhsim08G0120000 Rhododendron simsii HOM05D000149 ORTHO05D000076 3.7e-06 54.3 66 47.0
BcaB03g12393 Brassica carinata HOM05D000149 ORTHO05D000076 4.9e-06 53.9 68 42.6
Carub.0007s0383 Capsella rubella HOM05D000149 ORTHO05D000076 6.4e-06 53.5 78 41.0
TPR.G38576 Trifolium pratense HOM05D000149 ORTHO05D000076 6.4e-06 53.5 66 43.9
GSVIVG01018919001 Vitis vinifera HOM05D000149 ORTHO05D000076 6.4e-06 53.5 75 44.0
AL7G14570 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 8.4e-06 53.1 77 37.7
A03p64270 Brassica napus HOM05D000149 ORTHO05D000076 8.4e-06 53.1 75 41.3
C07p61720 Brassica napus HOM05D000149 ORTHO05D000076 8.4e-06 53.1 75 41.3
BolC7t46597H Brassica oleracea HOM05D000149 ORTHO05D000076 8.4e-06 53.1 75 41.3
Peaxi162Scf00418g00611 Petunia axillaris HOM05D000149 ORTHO05D000076 8.4e-06 53.1 66 45.5


User provided reference genes

Program Settings