Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 3.7e-67 258.1 130 100.0
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.8e-30 135.6 123 64.2
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 1.4e-26 123.2 129 54.3
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 7.8e-25 117.5 135 51.9
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 1.5e-23 113.2 132 50.8
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.9e-23 112.8 133 50.4
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 7.3e-23 110.9 133 51.1
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.2e-22 110.2 133 51.1
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 1.6e-22 109.8 116 55.2
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 2.1e-22 109.4 131 50.4
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 2.1e-22 109.4 133 49.6
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 2.8e-22 109.0 119 49.6
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 3.1e-21 105.5 117 53.0
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 4.0e-21 105.1 114 53.5
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 4.4e-20 101.7 120 47.5
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 5.8e-20 101.3 120 51.7
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.2e-19 99.4 113 54.0
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 2.9e-19 99.0 142 45.8
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 3.8e-19 98.6 105 46.7
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 4.9e-19 98.2 130 47.7
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 8.4e-19 97.4 116 48.3
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.9e-18 96.3 114 51.8
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 2.4e-18 95.9 140 44.3
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 4.2e-18 95.1 136 46.3
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 5.4e-18 94.7 125 45.6
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 7.1e-18 94.4 134 44.8
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 9.2e-18 94.0 134 44.8
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 2.7e-17 92.4 110 47.3
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 2.7e-17 92.4 126 41.3
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 6.0e-17 91.3 128 43.8
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 1.0e-16 90.5 112 49.1
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 3.9e-16 88.6 130 46.2
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 8.7e-16 87.4 148 43.2
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 8.7e-16 87.4 106 48.1
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 8.7e-16 87.4 106 48.1
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.9e-15 86.3 106 47.2
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 2.5e-15 85.9 108 49.1
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 4.3e-15 85.1 110 44.5
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 9.6e-15 84.0 115 45.2
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.3e-14 83.6 131 43.5
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 4.8e-14 81.6 96 45.8
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 1.4e-13 80.1 120 43.3
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 5.3e-13 78.2 101 45.5
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 5.3e-13 78.2 101 45.5
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 5.3e-13 78.2 102 43.1
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.2e-12 77.0 101 44.6
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.2e-12 77.0 101 44.6
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.2e-12 77.0 108 46.3
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 2.0e-12 76.3 97 46.4
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 2.0e-12 76.3 99 47.5
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 7.6e-12 74.3 101 44.6
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 9.9e-12 73.9 110 42.7
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 3.8e-11 72.0 120 43.3
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 4.9e-11 71.6 107 42.1
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 8.4e-11 70.9 90 44.4
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 1.9e-10 69.7 77 46.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 3.2e-10 68.9 86 41.9
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 3.2e-10 68.9 113 39.8
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 3.2e-10 68.9 55 60.0
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 9.3e-10 67.4 120 42.5


User provided reference genes

Program Settings