Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1829 Trochodendron aralioides HOM05D000475 ORTHO05D000343 1.2e-38 162.5 71 100.0
TAR633G1839 Trochodendron aralioides HOM05D000475 ORTHO05D000343 7.5e-14 80.1 53 73.6
TAR636G2035 Trochodendron aralioides HOM05D000475 ORTHO05D000343 4.9e-13 77.4 40 85.0
Aqoxy2G02215 Aquilegia oxysepala HOM05D000475 ORTHO05D000343 1.6e-11 72.4 40 77.5
MBI05_g28383_MAGBIO Magnolia biondii HOM05D000475 ORTHO05D000343 2.7e-11 71.6 40 75.0
Haze_24109 Corylus avellana HOM05D000475 ORTHO05D034904 6.0e-11 70.5 50 66.0
vmacro14539 Vaccinium macrocarpon HOM05D000475 ORTHO05D000343 7.8e-11 70.1 40 75.0
CiPaw.13G093100 Carya illinoinensis HOM05D000475 ORTHO05D000343 1.3e-10 69.3 40 77.5
DCAR_005966 Daucus carota HOM05D000475 ORTHO05D000343 1.3e-10 69.3 40 75.0
Actinidia37197 Actinidia chinensis HOM05D000475 ORTHO05D000343 1.7e-10 68.9 40 72.5
CSS0003311 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 1.7e-10 68.9 40 75.0
Cfa011514 Carpinus fangiana HOM05D000475 ORTHO05D000343 3.0e-10 68.2 40 75.0
Dinv04176 Davidia involucrata HOM05D000475 ORTHO05D000343 3.0e-10 68.2 40 75.0
Rhsim01G0229100 Rhododendron simsii HOM05D000475 ORTHO05D000343 3.0e-10 68.2 40 72.5
Actinidia07029 Actinidia chinensis HOM05D000475 ORTHO05D000343 3.9e-10 67.8 40 70.0
Hma1.2p1_0615F.1_g189900 Hydrangea macrophylla HOM05D000475 ORTHO05D000343 3.9e-10 67.8 40 75.0
MSTRG.21214 Avicennia marina HOM05D000475 ORTHO05D000343 5.1e-10 67.4 40 72.5
CSS0039094 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 5.1e-10 67.4 40 75.0
GSVIVG01024945001 Vitis vinifera HOM05D000475 ORTHO05D000343 6.6e-10 67.0 40 72.5
Ciclev10027878m.g Citrus clementina HOM05D000475 ORTHO05D000343 8.6e-10 66.6 40 72.5
Migut.D02086 Erythranthe guttata HOM05D000475 ORTHO05D000343 8.6e-10 66.6 40 72.5
QL01p031578 Quercus lobata HOM05D000475 ORTHO05D000343 1.9e-09 65.5 47 70.2
Ah.15g097520 Amaranthus hybridus HOM05D000475 ORTHO05D000343 3.3e-09 64.7 40 70.0
EL10Ac7g16030 Beta vulgaris HOM05D000475 ORTHO05D000343 3.3e-09 64.7 40 67.5
Dinv17014 Davidia involucrata HOM05D000475 ORTHO05D000343 3.3e-09 64.7 40 70.0
Dinv42963 Davidia involucrata HOM05D000475 ORTHO05D000343 3.3e-09 64.7 40 70.0
Dinv43136 Davidia involucrata HOM05D000475 ORTHO05D000343 3.3e-09 64.7 40 70.0
AUR62001775 Chenopodium quinoa HOM05D000475 ORTHO05D000343 4.3e-09 64.3 40 65.0
AUR62009563 Chenopodium quinoa HOM05D000475 ORTHO05D000343 4.3e-09 64.3 40 65.0
ECA236G2884 Erigeron canadensis HOM05D000475 ORTHO05D000343 4.3e-09 64.3 40 65.0
SGA_v2.0_scaffold203G41532 Striga asiatica HOM05D000475 ORTHO05D000343 4.3e-09 64.3 40 70.0
Hund18900 Selenicereus undatus HOM05D000475 ORTHO05D000343 7.3e-09 63.5 40 70.0
SGA_v2.0_scaffold41G15694 Striga asiatica HOM05D000475 ORTHO05D000343 1.6e-08 62.4 40 70.0
ATR0559G058 Amborella trichopoda HOM05D000475 ORTHO05D000343 3.6e-08 61.2 54 59.3
Manes.02G131800 Manihot esculenta HOM05D000475 ORTHO05D000343 3.6e-08 61.2 40 65.0
HPP92_019834 Vanilla planifolia HOM05D000475 ORTHO05D000343 3.6e-08 61.2 52 55.8
Cc01_g12980 Coffea canephora HOM05D000475 ORTHO05D000343 6.2e-08 60.5 40 62.5
Nitab4.5_0001326g0140 Nicotiana tabacum HOM05D019137 ORTHO05D025929 8.1e-08 60.1 47 57.4
Ah.08g217970 Amaranthus hybridus HOM05D000475 ORTHO05D000343 1.1e-07 59.7 40 67.5
PGSC0003DMG400030416 Solanum tuberosum HOM05D019137 ORTHO05D025929 2.4e-07 58.5 40 60.0
Sopen06g001530 Solanum pennellii HOM05D000475 ORTHO05D000343 4.0e-07 57.8 40 62.5
Peaxi162Scf00216g00027 Petunia axillaris HOM05D000475 ORTHO05D000343 5.2e-07 57.4 40 62.5
Solyc06g005570.4 Solanum lycopersicum HOM05D000475 ORTHO05D000343 6.8e-07 57.0 40 62.5
CAN.G632.5 Capsicum annuum HOM05D000475 ORTHO05D000343 1.2e-06 56.2 40 60.0
CDE04G0323 Ceratophyllum demersum HOM05D000475 ORTHO05D000343 1.2e-06 56.2 40 55.0
ECA248G2685 Erigeron canadensis HOM05D000475 ORTHO05D000343 1.2e-06 56.2 40 60.0
Nitab4.5_0000272g0100 Nicotiana tabacum HOM05D000475 ORTHO05D000343 1.5e-06 55.8 40 60.0
Nitab4.5_0003943g0010 Nicotiana tabacum HOM05D000475 ORTHO05D000343 1.5e-06 55.8 40 60.0
Atru.chr3.3942 Acer truncatum HOM05D000475 ORTHO05D000343 2.6e-06 55.1 40 55.0
HanXRQChr17g0551461 Helianthus annuus HOM05D000475 ORTHO05D000343 4.4e-06 54.3 40 57.5
CDE07G0312 Ceratophyllum demersum HOM05D000475 ORTHO05D000343 7.6e-06 53.5 40 55.0


User provided reference genes

Program Settings