Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1722 Trochodendron aralioides HOM05D006896 ORTHO05D007622 1.1e-89 333.2 163 100.0
TAR636G1166 Trochodendron aralioides HOM05D006896 ORTHO05D007622 1.8e-42 176.4 99 88.9
Nn1g00183 Nelumbo nucifera HOM05D006896 ORTHO05D007622 3.4e-33 145.6 99 70.7
Aqoxy3G03866 Aquilegia oxysepala HOM05D006896 ORTHO05D007622 3.6e-27 125.6 99 61.6
GSVIVG01016958001 Vitis vinifera HOM05D006896 ORTHO05D007622 4.1e-23 112.1 103 55.3
Thecc.01G002700 Theobroma cacao HOM05D006896 ORTHO05D007622 1.0e-21 107.5 85 62.4
Manes.04G135200 Manihot esculenta HOM05D006896 ORTHO05D007622 5.0e-21 105.1 99 52.5
Gohir.A09G147400 Gossypium hirsutum HOM05D006896 ORTHO05D007622 3.6e-19 99.0 86 57.0
Gorai.006G164500 Gossypium raimondii HOM05D006896 ORTHO05D007622 1.8e-18 96.7 86 55.8
PSO210G5688 Papaver somniferum HOM05D006896 ORTHO05D007622 1.8e-18 96.7 94 51.1
Gohir.D09G143000 Gossypium hirsutum HOM05D006896 ORTHO05D007622 6.8e-18 94.7 86 54.7
Potri.003G047600 Populus trichocarpa HOM05D006896 ORTHO05D007622 8.9e-18 94.4 89 56.2
Sabra03G0029600 Salix brachista HOM05D000996 ORTHO05D000858 3.4e-17 92.4 89 55.1
Ciclev10026494m.g Citrus clementina HOM05D006896 ORTHO05D007622 1.4e-15 87.0 98 45.9
EL10Ac4g10121 Beta vulgaris HOM05D006896 ORTHO05D007622 1.9e-15 86.7 107 48.6
EL10Ac4g10168 Beta vulgaris HOM05D006896 ORTHO05D007622 1.9e-15 86.7 107 48.6
Eucgr.F03083 Eucalyptus grandis HOM05D006896 ORTHO05D007622 3.2e-15 85.9 102 46.1
Sc15g0001740 Simmondsia chinensis HOM05D006896 ORTHO05D007622 4.1e-15 85.5 95 46.3
Ciclev10022257m.g Citrus clementina HOM05D006896 ORTHO05D007622 1.2e-14 84.0 98 44.9
CiPaw.04G076100 Carya illinoinensis HOM05D006896 ORTHO05D007622 1.6e-14 83.6 88 51.1
Cpa.g.sc25.137 Carica papaya HOM05D006896 ORTHO05D007622 2.7e-14 82.8 85 51.8
CANSAT21G0002 Cannabis sativa HOM05D006896 ORTHO05D007622 7.8e-14 81.3 84 52.4
Hund07447 Selenicereus undatus HOM05D006896 ORTHO05D007622 1.3e-13 80.5 90 45.6
EL10Ac4g10155 Beta vulgaris HOM05D006896 ORTHO05D007622 2.3e-13 79.7 105 45.7
ClCG09G000270 Citrullus lanatus HOM05D006896 ORTHO05D007622 3.0e-13 79.3 83 45.8
EL10Ac4g10160 Beta vulgaris HOM05D006896 ORTHO05D007622 5.0e-13 78.6 105 44.8
QL06p022383 Quercus lobata HOM05D006896 ORTHO05D007622 1.9e-12 76.6 90 51.1
CsaV3_7G035230 Cucumis sativus L. HOM05D006896 ORTHO05D007622 2.5e-12 76.3 86 43.0
EL10Ac4g10131 Beta vulgaris HOM05D006896 ORTHO05D007622 5.6e-12 75.1 105 43.8
MELO3C024432.2 Cucumis melo HOM05D006896 ORTHO05D007622 5.6e-12 75.1 86 41.9
TWI75G0052 Tripterygium wilfordii HOM05D006896 ORTHO05D007622 9.5e-12 74.3 68 55.9
EL10Ac4g10129 Beta vulgaris HOM05D006896 ORTHO05D007622 1.2e-11 73.9 106 44.3
Ah.06g194440 Amaranthus hybridus HOM05D006896 ORTHO05D007622 1.6e-11 73.6 90 47.8
Zm00001eb122950 Zea mays HOM05D006896 ORTHO05D007622 2.8e-11 72.8 89 43.8
Os07g0611600 Oryza sativa ssp. japonica HOM05D006896 ORTHO05D007622 3.6e-11 72.4 95 42.1
Duzib235G0563 Durio zibethinus HOM05D006896 ORTHO05D007622 4.7e-11 72.0 45 73.3
Nitab4.5_0002546g0010 Nicotiana tabacum HOM05D006896 ORTHO05D007622 4.7e-11 72.0 91 45.1
PSO210G1164 Papaver somniferum HOM05D006896 ORTHO05D007622 4.7e-11 72.0 71 50.7
Actinidia05615 Actinidia chinensis HOM05D006896 ORTHO05D007622 1.4e-10 70.5 90 44.4
Nitab4.5_0001057g0240 Nicotiana tabacum HOM05D006896 ORTHO05D007622 1.4e-10 70.5 91 44.0
Peaxi162Scf00152g00734 Petunia axillaris HOM05D006896 ORTHO05D007622 3.1e-10 69.3 91 45.1
Prupe.1G582300 Prunus persica HOM05D006896 ORTHO05D007622 4.0e-10 68.9 127 36.2
Cc02_g30070 Coffea canephora HOM05D006896 ORTHO05D007622 5.2e-10 68.6 83 41.0
AagrBONN_evm.TU.Sc2ySwM_228.5087 Anthoceros agrestis HOM05D015888 ORTHO05D007622 1.2e-09 67.4 80 48.8
AagrBONN_evm.TU.Sc2ySwM_344.5457 Anthoceros agrestis HOM05D015888 ORTHO05D007622 1.5e-09 67.0 80 48.8
CAN.G855.24 Capsicum annuum HOM05D006896 ORTHO05D007622 1.5e-09 67.0 82 45.1
Cfa015335 Carpinus fangiana HOM05D006896 ORTHO05D007622 2.0e-09 66.6 109 40.4
MD15G1357300 Malus domestica HOM05D006896 ORTHO05D007622 2.6e-09 66.2 98 39.8
Sopen06g034890 Solanum pennellii HOM05D006896 ORTHO05D007622 3.4e-09 65.9 99 40.4
Haze_24358 Corylus avellana HOM05D006896 ORTHO05D007622 4.4e-09 65.5 97 43.3
MD08G1165000 Malus domestica HOM05D006896 ORTHO05D007622 4.4e-09 65.5 98 40.8
Pp3c20_22330 Physcomitrium patens HOM05D015888 ORTHO05D007622 7.5e-09 64.7 86 47.7
PGSC0003DMG400024908 Solanum tuberosum HOM05D006896 ORTHO05D007622 7.5e-09 64.7 92 42.4
Solyc06g083505.1 Solanum lycopersicum HOM05D006896 ORTHO05D007622 9.8e-09 64.3 98 39.8
Sed0020352 Sechium edule HOM05D006896 ORTHO05D007622 1.3e-08 63.9 99 37.4
PGSC0003DMG401020091 Solanum tuberosum HOM05D006896 ORTHO05D007622 1.3e-08 63.9 114 37.7
AUR62042888 Chenopodium quinoa HOM05D000493 ORTHO05D007622 2.2e-08 63.2 59 55.9
DCAR_023372 Daucus carota HOM05D001895 ORTHO05D002082 2.9e-08 62.8 94 39.4
Phvul.006G182200 Phaseolus vulgaris HOM05D006896 ORTHO05D007622 2.9e-08 62.8 87 47.1
Glyma.15G077800 Glycine max HOM05D006896 ORTHO05D007622 3.7e-08 62.4 97 42.3
Glyma.15G171400 Glycine max HOM05D006896 ORTHO05D007622 3.7e-08 62.4 97 42.3
SEGI_15291 Sequoiadendron giganteum HOM05D015888 ORTHO05D007622 3.7e-08 62.4 79 48.1
VMungo0540G0426 Vigna mungo HOM05D006896 ORTHO05D007622 3.7e-08 62.4 87 44.8
DCAR_021683 Daucus carota HOM05D006896 ORTHO05D007622 6.4e-08 61.6 94 38.3
Mapoly0123s0021 Marchantia polymorpha HOM05D015888 ORTHO05D007622 8.3e-08 61.2 79 45.6
RhsimUnG0044500 Rhododendron simsii HOM05D006896 ORTHO05D007622 1.4e-07 60.5 90 37.8
unitig_27.g25077 Utricularia gibba HOM05D006896 ORTHO05D007622 3.2e-07 59.3 88 36.4
AUR62037718 Chenopodium quinoa HOM05D000493 ORTHO05D007622 1.2e-06 57.4 62 50.0
Cc04_g02450 Coffea canephora HOM05D006896 ORTHO05D007622 1.6e-06 57.0 80 37.5
Lalb_Chr02g0144491 Lupinus albus HOM05D006896 ORTHO05D007622 2.1e-06 56.6 91 45.1
PSO210G5808 Papaver somniferum HOM05D006896 ORTHO05D007622 2.1e-06 56.6 56 53.6
PGR102G1058 Punica granatum HOM05D006896 ORTHO05D007622 6.0e-06 55.1 90 40.0
arahy.Tifrunner.gnm1.ann1.530D0B Arachis hypogaea HOM05D006896 ORTHO05D007622 7.8e-06 54.7 108 41.7
arahy.Tifrunner.gnm1.ann1.73V7U9 Arachis hypogaea HOM05D006896 ORTHO05D007622 7.8e-06 54.7 108 41.7


User provided reference genes

Program Settings