Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.0e-61 238.8 110 100.0
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.7e-57 225.7 110 93.6
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 5.0e-57 224.2 110 92.7
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 9.5e-56 219.9 111 90.1
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 1.2e-55 219.5 110 90.0
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.6e-55 219.2 110 90.0
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.6e-55 219.2 110 89.1
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.1e-55 218.8 110 90.0
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.1e-55 218.8 102 96.1
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 2.8e-55 218.4 104 93.3
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 2.8e-55 218.4 110 89.1
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.6e-55 218.0 110 88.2
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 3.6e-55 218.0 110 91.8
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 4.7e-55 217.6 104 91.3
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 4.7e-55 217.6 110 90.0
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 6.1e-55 217.2 110 89.1
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 6.1e-55 217.2 111 89.2
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 8.0e-55 216.9 110 89.1
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 1.0e-54 216.5 110 88.2
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 1.4e-54 216.1 108 88.0
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.8e-54 215.7 106 87.7
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.8e-54 215.7 110 88.2
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 2.3e-54 215.3 110 88.2
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 2.3e-54 215.3 110 88.2
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 2.3e-54 215.3 108 89.8
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 3.0e-54 214.9 111 88.3
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 3.0e-54 214.9 110 85.5
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 3.0e-54 214.9 109 88.1
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 5.2e-54 214.2 104 91.3
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 6.8e-54 213.8 110 88.2
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 6.8e-54 213.8 112 88.4
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 6.8e-54 213.8 110 86.4
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 6.8e-54 213.8 107 90.7
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 8.9e-54 213.4 101 93.1
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 8.9e-54 213.4 102 92.2
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 8.9e-54 213.4 110 86.4
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 8.9e-54 213.4 107 86.9
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 8.9e-54 213.4 107 88.8
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 8.9e-54 213.4 109 87.2
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 1.2e-53 213.0 110 87.3
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 1.2e-53 213.0 111 88.3
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 1.2e-53 213.0 108 85.2
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.2e-53 213.0 104 90.4
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 1.2e-53 213.0 107 86.9
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 1.5e-53 212.6 107 88.8
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.5e-53 212.6 109 86.2
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.5e-53 212.6 109 86.2
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.0e-53 212.2 104 89.4
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 2.6e-53 211.8 110 85.5
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 3.4e-53 211.5 110 87.3
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 3.4e-53 211.5 110 86.4
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 4.4e-53 211.1 110 86.4
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 5.7e-53 210.7 109 88.1
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 7.5e-53 210.3 110 85.5
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 7.5e-53 210.3 97 93.8
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 9.8e-53 209.9 104 88.5
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 9.8e-53 209.9 106 85.8
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 1.3e-52 209.5 108 88.0
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.3e-52 209.5 108 88.0
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 1.3e-52 209.5 104 87.5
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.2e-52 208.8 111 85.6
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 2.8e-52 208.4 110 85.5
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 4.9e-52 207.6 101 92.1
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 6.3e-52 207.2 110 84.5
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 8.3e-52 206.8 110 84.5
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 8.3e-52 206.8 101 89.1
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.1e-51 206.5 110 83.6
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.1e-51 206.5 110 83.6
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 1.1e-51 206.5 110 82.7
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.4e-51 206.1 107 83.2
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.8e-51 205.7 109 83.5
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 3.1e-51 204.9 98 90.8
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 3.1e-51 204.9 108 84.3
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 7.0e-51 203.8 101 87.1
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.6e-50 202.6 101 88.1
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.6e-50 202.6 101 86.1
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.6e-50 202.6 101 87.1
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 2.0e-50 202.2 101 88.1
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 2.0e-50 202.2 108 83.3
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 2.7e-50 201.8 110 80.9
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 4.5e-50 201.1 115 77.4
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 5.9e-50 200.7 115 76.5
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 5.9e-50 200.7 104 80.8
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.9e-50 200.7 110 80.9
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 7.8e-50 200.3 97 89.7
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 1.0e-49 199.9 101 84.2
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.3e-49 199.5 110 80.0
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.7e-49 199.1 103 84.5
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 2.3e-49 198.7 104 79.8
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 2.3e-49 198.7 104 80.8
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 2.3e-49 198.7 104 80.8
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 2.3e-49 198.7 104 80.8
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 2.3e-49 198.7 104 80.8
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 2.3e-49 198.7 104 80.8
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 2.3e-49 198.7 110 80.0
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.3e-49 198.7 110 80.0
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 2.3e-49 198.7 104 80.8
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 6.6e-49 197.2 108 78.7
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 1.5e-48 196.1 108 77.8
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 4.3e-48 194.5 101 82.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 5.6e-48 194.1 104 79.8
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 1.6e-47 192.6 101 83.2
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.6e-31 139.4 101 58.4
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 4.9e-28 127.9 61 88.5
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 3.3e-24 115.2 60 81.7
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 9.2e-19 97.1 66 69.7
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.8e-15 85.5 60 56.7


User provided reference genes

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