Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 4.8e-105 384.4 184 100.0
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 6.8e-83 310.8 183 80.9
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 1.9e-80 302.8 181 79.0
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 8.6e-78 293.9 176 77.8
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 1.6e-76 289.7 183 74.9
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 1.8e-75 286.2 176 75.6
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 3.1e-75 285.4 176 76.7
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 4.0e-75 285.0 176 77.3
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 4.0e-75 285.0 176 75.0
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 5.2e-75 284.6 176 72.7
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 6.8e-75 284.3 179 76.0
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 8.9e-75 283.9 176 75.6
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 1.3e-73 280.0 176 74.4
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.7e-73 279.6 176 74.4
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 1.7e-73 279.6 176 75.0
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 3.7e-73 278.5 176 74.4
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 3.7e-73 278.5 176 74.4
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 4.9e-73 278.1 182 72.0
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 8.3e-73 277.3 179 72.6
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 8.3e-73 277.3 176 74.4
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.9e-72 276.2 176 74.4
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 1.9e-72 276.2 183 72.1
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 2.4e-72 275.8 176 75.0
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 3.2e-72 275.4 176 74.4
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 5.4e-72 274.6 179 72.1
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 5.4e-72 274.6 176 73.3
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 7.1e-72 274.2 182 70.9
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 1.6e-71 273.1 176 72.7
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 1.6e-71 273.1 175 73.1
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 4.6e-71 271.6 177 72.3
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 7.8e-71 270.8 176 73.3
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 7.8e-71 270.8 183 71.0
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 1.0e-70 270.4 176 73.3
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 1.3e-70 270.0 176 73.3
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 1.7e-70 269.6 176 73.3
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 3.9e-70 268.5 176 72.2
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 1.1e-69 266.9 176 72.2
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 2.5e-69 265.8 176 72.2
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 3.3e-69 265.4 174 71.3
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 4.3e-69 265.0 187 70.1
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 7.3e-69 264.2 175 70.9
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 1.2e-68 263.5 183 70.5
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 1.2e-68 263.5 176 68.2
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 2.1e-68 262.7 183 69.4
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 4.7e-68 261.5 189 68.3
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 4.7e-68 261.5 176 69.9
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 1.4e-67 260.0 176 69.3
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 8.9e-67 257.3 196 65.3
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 1.2e-66 256.9 182 65.9
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 2.0e-66 256.1 168 70.8
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 2.6e-66 255.8 176 66.5
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 2.2e-65 252.7 172 68.0
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 4.9e-65 251.5 176 68.8
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 4.9e-65 251.5 176 68.8
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 4.9e-65 251.5 176 68.8
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 1.1e-64 250.4 164 73.2
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 3.2e-64 248.8 172 68.0
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 3.2e-64 248.8 172 68.0
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 7.1e-64 247.7 176 66.5
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 9.3e-64 247.3 172 67.4
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 9.3e-64 247.3 176 67.0
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 1.6e-63 246.5 182 64.8
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 6.0e-63 244.6 170 67.6
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 7.8e-63 244.2 176 67.6
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 1.0e-62 243.8 182 65.9
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 1.1e-61 240.4 182 64.3
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 7.3e-61 237.7 187 62.6
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 1.2e-58 230.3 194 58.8
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 2.0e-58 229.6 207 56.0
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 1.7e-57 226.5 183 61.2
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 1.1e-56 223.8 181 61.9
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 2.4e-56 222.6 134 78.4
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.6e-55 219.9 159 67.9
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 2.3e-54 216.1 170 61.8
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 3.3e-53 212.2 134 74.6
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 4.3e-53 211.8 140 72.1
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 7.3e-53 211.1 218 50.9
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 1.3e-52 210.3 183 51.9
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 3.6e-52 208.8 142 66.9
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.1e-51 207.2 170 59.4
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 2.9e-49 199.1 176 56.2
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 1.0e-46 190.7 183 47.5
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 3.3e-45 185.7 201 47.3
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 5.3e-43 178.3 130 66.2
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 1.2e-42 177.2 153 59.5
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 1.8e-38 163.3 177 46.3
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 3.3e-37 159.1 98 74.5
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 5.7e-37 158.3 235 40.4
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 4.1e-35 152.1 100 72.0
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 9.3e-32 141.0 178 37.6
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 1.2e-31 140.6 94 67.0
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 1.2e-31 140.6 82 79.3
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.0e-30 137.5 87 71.3
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 1.9e-29 133.3 83 74.7
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 1.7e-25 120.2 186 39.8
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 2.2e-25 119.8 178 39.9
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 4.2e-16 89.0 157 33.1
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 1.6e-15 87.0 84 51.2
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.8e-14 83.6 53 67.9
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 4.1e-11 72.4 81 45.7
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 5.5e-08 62.0 156 28.2
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 4.7e-07 58.9 39 64.1
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.0e-06 57.8 149 28.9
Os08g0243100 Oryza sativa ssp. japonica HOM05D005118 ORTHO05D006038 4.0e-06 55.8 165 27.9


User provided reference genes

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