Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1646 Trochodendron aralioides HOM05D007766 ORTHO05D009733 1.2e-74 283.1 143 100.0
GSVIVG01028075001 Vitis vinifera HOM05D007766 ORTHO05D009733 9.5e-32 140.6 136 58.1
CSS0041323 Camellia sinensis var. sinensis HOM05D007766 ORTHO05D009733 2.8e-31 139.0 127 59.8
Actinidia27601 Actinidia chinensis HOM05D007766 ORTHO05D009733 3.6e-31 138.7 120 64.2
Dinv33093 Davidia involucrata HOM05D007766 ORTHO05D009733 2.3e-30 136.0 127 58.3
Prupe.8G268800 Prunus persica HOM05D007766 ORTHO05D009733 5.2e-30 134.8 149 55.0
Cc01_g21240 Coffea canephora HOM05D007766 ORTHO05D009733 6.8e-30 134.4 137 54.0
Eucgr.H01072 Eucalyptus grandis HOM05D007766 ORTHO05D009733 6.8e-30 134.4 122 60.7
Haze_04998 Corylus avellana HOM05D007766 ORTHO05D009733 1.2e-29 133.7 122 58.2
TWI36G1235 Tripterygium wilfordii HOM05D007766 ORTHO05D009733 1.2e-29 133.7 113 64.6
Gohir.A12G127500 Gossypium hirsutum HOM05D007766 ORTHO05D009733 2.0e-29 132.9 119 63.0
PGR119G1997 Punica granatum HOM05D007766 ORTHO05D009733 2.0e-29 132.9 131 57.3
ClCG09G005330 Citrullus lanatus HOM05D007766 ORTHO05D009733 2.6e-29 132.5 146 54.1
QL12p028831 Quercus lobata HOM05D007766 ORTHO05D009733 3.4e-29 132.1 118 61.9
Thecc.01G308600 Theobroma cacao HOM05D007766 ORTHO05D009733 4.4e-29 131.7 126 58.7
Nn3g21607 Nelumbo nucifera HOM05D007766 ORTHO05D009733 5.8e-29 131.3 154 51.3
MD03G1298400 Malus domestica HOM05D007766 ORTHO05D009733 7.5e-29 131.0 157 51.6
CsaV3_7G029750 Cucumis sativus L. HOM05D007766 ORTHO05D009733 1.3e-28 130.2 133 54.1
RcHm_v2.0_Chr7g0241981 Rosa chinensis HOM05D007766 ORTHO05D009733 1.3e-28 130.2 118 61.0
Lj1C21T2 Lonicera japonica HOM05D007766 ORTHO05D009733 1.7e-28 129.8 122 58.2
vmacro02422 Vaccinium macrocarpon HOM05D007766 ORTHO05D009733 1.7e-28 129.8 136 58.1
CANSAT25G3789 Cannabis sativa HOM05D007766 ORTHO05D009733 2.2e-28 129.4 118 55.9
TPR.G20299 Trifolium pratense HOM05D007766 ORTHO05D009733 2.2e-28 129.4 115 60.9
Ca_09199_v3 Cicer arietinum L. HOM05D007766 ORTHO05D009733 2.9e-28 129.0 122 55.7
Gohir.D12G131000 Gossypium hirsutum HOM05D007766 ORTHO05D009733 3.7e-28 128.6 119 57.1
Gorai.008G142300 Gossypium raimondii HOM05D007766 ORTHO05D009733 3.7e-28 128.6 119 57.1
Rhsim13G0007300 Rhododendron simsii HOM05D007766 ORTHO05D009733 3.7e-28 128.6 129 56.6
Cpa.g.sc151.50 Carica papaya HOM05D007766 ORTHO05D009733 6.4e-28 127.9 123 59.3
Manes.05G001200 Manihot esculenta HOM05D007766 ORTHO05D009733 6.4e-28 127.9 119 55.5
Glyma.19G214500 Glycine max HOM05D007766 ORTHO05D009733 1.4e-27 126.7 113 59.3
Sabra14G0092600 Salix brachista HOM05D007766 ORTHO05D009733 1.4e-27 126.7 116 58.6
Lalb_Chr15g0078421 Lupinus albus HOM05D007766 ORTHO05D009733 3.2e-27 125.6 118 56.8
Duzib138G0131 Durio zibethinus HOM05D007766 ORTHO05D009733 7.0e-27 124.4 127 56.7
Lj1g0002879 Lotus japonicus HOM05D007766 ORTHO05D009733 7.0e-27 124.4 127 54.3
VMungo1383G0118 Vigna mungo HOM05D007766 ORTHO05D009733 7.0e-27 124.4 113 56.6
Psat3g020680 Pisum sativum HOM05D007766 ORTHO05D009733 2.0e-26 122.9 112 56.2
Nitab4.5_0000116g0120 Nicotiana tabacum HOM05D007766 ORTHO05D009733 2.7e-26 122.5 133 49.6
Medtr7g109280 Medicago truncatula HOM05D007766 ORTHO05D009733 3.5e-26 122.1 116 56.0
COL.COLO4_23278 Corchorus olitorius HOM05D007766 ORTHO05D009733 4.6e-26 121.7 125 56.8
Phvul.001G211300 Phaseolus vulgaris HOM05D007766 ORTHO05D009733 4.6e-26 121.7 113 56.6
Cfa005851 Carpinus fangiana HOM05D007766 ORTHO05D009733 6.0e-26 121.3 122 54.1
PGSC0003DMG400031827 Solanum tuberosum HOM05D007766 ORTHO05D009733 7.8e-26 120.9 128 53.1
MELO3C015946.2 Cucumis melo HOM05D007766 ORTHO05D009733 1.0e-25 120.6 144 47.9
Potri.014G124500 Populus trichocarpa HOM05D007766 ORTHO05D009733 1.7e-25 119.8 116 58.6
CiPaw.07G114200 Carya illinoinensis HOM05D007766 ORTHO05D009733 3.0e-25 119.0 122 54.9
FAN18G0466 Fragaria x ananassa HOM05D007766 ORTHO05D009733 3.0e-25 119.0 118 53.4
FAN18G1064 Fragaria x ananassa HOM05D007766 ORTHO05D009733 3.0e-25 119.0 118 53.4
FvH4_5g39680 Fragaria vesca HOM05D007766 ORTHO05D009733 3.9e-25 118.6 128 49.2
FAN08G1563 Fragaria x ananassa HOM05D007766 ORTHO05D009733 3.9e-25 118.6 128 49.2
Sed0007654 Sechium edule HOM05D007766 ORTHO05D009733 5.0e-25 118.2 146 51.4
ECA248G3735 Erigeron canadensis HOM05D007766 ORTHO05D009733 1.1e-24 117.1 123 50.4
Nitab4.5_0000803g0050 Nicotiana tabacum HOM05D007766 ORTHO05D009733 1.1e-24 117.1 133 47.4
arahy.Tifrunner.gnm1.ann1.28FBJ8 Arachis hypogaea HOM05D007766 ORTHO05D009733 1.9e-24 116.3 118 55.9
Ah.15g092870 Amaranthus hybridus HOM05D007766 ORTHO05D009733 1.2e-23 113.6 91 64.8
Carub.0001s0178 Capsella rubella HOM05D007766 ORTHO05D009733 1.2e-23 113.6 127 49.6
AT1G02700 Arabidopsis thaliana HOM05D007766 ORTHO05D009733 2.1e-23 112.8 127 51.2
PSO478G3523 Papaver somniferum HOM05D007766 ORTHO05D009733 2.1e-23 112.8 131 51.9
Peaxi162Scf00001g00292 Petunia axillaris HOM05D007766 ORTHO05D009733 2.8e-23 112.5 133 48.1
Sopen09g030400 Solanum pennellii HOM05D007766 ORTHO05D009733 4.7e-23 111.7 131 51.1
AL1G12070 Arabidopsis lyrata HOM05D007766 ORTHO05D009733 8.0e-23 110.9 131 45.8
arahy.Tifrunner.gnm1.ann1.MEA9U7 Arachis hypogaea HOM05D007766 ORTHO05D009733 1.8e-22 109.8 121 50.4
Atru.chr5.1065 Acer truncatum HOM05D007766 ORTHO05D009733 2.3e-22 109.4 121 51.2
PSO782G1382 Papaver somniferum HOM05D007766 ORTHO05D009733 3.1e-22 109.0 110 56.4
CARHR002000 Cardamine hirsuta HOM05D007766 ORTHO05D009733 5.2e-22 108.2 127 49.6
HanXRQChr01g0000891 Helianthus annuus HOM05D007766 ORTHO05D009733 6.8e-22 107.8 122 49.2
Migut.D00109 Erythranthe guttata HOM05D007766 ORTHO05D009733 1.2e-21 107.1 121 47.1
MBI18_g25084_MAGBIO Magnolia biondii HOM05D007766 ORTHO05D009733 1.5e-21 106.7 110 53.6
Ciclev10024028m.g Citrus clementina HOM05D007766 ORTHO05D009733 5.8e-21 104.8 117 55.6
Aqoxy2G02831 Aquilegia oxysepala HOM05D007766 ORTHO05D009733 9.8e-21 104.0 113 50.4
EL10Ac7g17611 Beta vulgaris HOM05D007766 ORTHO05D009733 9.8e-21 104.0 91 54.9
SGA_v2.0_scaffold334G49048 Striga asiatica HOM05D007766 ORTHO05D009733 3.7e-20 102.1 114 51.8
Lsat_1_v5_gn_5_190141 Lactuca sativa HOM05D007766 ORTHO05D009733 4.9e-20 101.7 117 47.9
BolC5t28921H Brassica oleracea HOM05D000768 ORTHO05D000665 6.4e-20 101.3 125 52.0
BraA10t42417Z Brassica rapa HOM05D000768 ORTHO05D000665 1.1e-19 100.5 125 51.2
C05p01390 Brassica napus HOM05D000768 ORTHO05D000665 1.4e-19 100.1 125 52.0
Sc17g0002970 Simmondsia chinensis HOM05D007766 ORTHO05D009733 1.4e-19 100.1 120 47.5
Aa31LG1G9860 Aethionema arabicum HOM05D007766 ORTHO05D009733 5.4e-19 98.2 127 44.9
CDE05G0244 Ceratophyllum demersum HOM05D007766 ORTHO05D009733 1.2e-18 97.1 106 50.9
Thhalv10008633m.g Eutrema salsugineum HOM05D007766 ORTHO05D009733 1.2e-18 97.1 94 57.4
Sp1g01680 Schrenkiella parvula HOM05D007766 ORTHO05D009733 4.6e-18 95.1 88 56.8
DCAR_002867 Daucus carota HOM05D007766 ORTHO05D009733 2.3e-17 92.8 91 52.7
unitig_60.g25659 Utricularia gibba HOM05D001839 ORTHO05D001867 1.1e-16 90.5 136 43.4
Solyc09g075600.3 Solanum lycopersicum HOM05D007766 ORTHO05D009733 1.2e-15 87.0 77 59.7
A10p01420 Brassica napus HOM05D000768 ORTHO05D000665 5.4e-11 71.6 94 51.1
Actinidia21421 Actinidia chinensis HOM05D007766 ORTHO05D009733 2.7e-10 69.3 67 62.7
Zm00001eb330520 Zea mays HOM05D007766 ORTHO05D009733 3.5e-10 68.9 113 37.2


User provided reference genes

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