Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.1e-140 502.3 238 100.0
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 4.7e-44 182.2 222 49.1
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 8.1e-44 181.4 282 45.4
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.3e-43 179.9 222 47.3
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.3e-43 179.9 222 47.3
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 2.3e-43 179.9 219 48.9
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 3.1e-43 179.5 222 49.1
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 6.8e-43 178.3 222 48.2
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 8.9e-43 177.9 222 48.2
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 2.0e-42 176.8 218 47.2
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 5.8e-42 175.3 232 47.4
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 2.2e-41 173.3 224 47.8
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 2.9e-41 172.9 217 47.5
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 3.7e-41 172.6 220 47.7
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 6.4e-41 171.8 222 46.8
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 6.4e-41 171.8 220 48.2
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 1.1e-40 171.0 220 46.8
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.1e-40 171.0 220 46.4
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 1.4e-40 170.6 219 47.5
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.9e-40 170.2 222 47.3
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.4e-40 169.9 222 46.4
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 2.4e-40 169.9 222 45.9
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 2.7e-39 166.4 232 44.8
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 3.5e-39 166.0 219 43.8
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 6.0e-39 165.2 221 45.7
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.0e-38 164.5 224 46.9
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 1.0e-38 164.5 221 47.1
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 1.7e-38 163.7 218 45.9
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 2.3e-38 163.3 222 45.9
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 5.1e-38 162.2 224 44.6
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 6.6e-38 161.8 229 44.5
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 6.6e-38 161.8 222 44.6
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 6.6e-38 161.8 221 46.6
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 8.6e-38 161.4 235 44.3
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 1.1e-37 161.0 222 45.0
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 1.5e-37 160.6 216 44.9
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.9e-37 160.2 231 44.6
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 3.3e-37 159.5 235 43.8
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 3.3e-37 159.5 218 44.5
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 3.3e-37 159.5 217 45.6
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 9.5e-37 157.9 234 44.4
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 9.5e-37 157.9 221 43.9
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 9.5e-37 157.9 230 44.8
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 9.5e-37 157.9 224 45.5
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 9.5e-37 157.9 220 45.0
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.2e-36 157.5 220 43.2
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.6e-36 157.1 231 44.2
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 2.1e-36 156.8 217 45.2
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 2.8e-36 156.4 218 44.5
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 2.8e-36 156.4 235 43.0
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 3.6e-36 156.0 234 44.0
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 6.2e-36 155.2 217 43.8
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 8.1e-36 154.8 217 43.3
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.1e-35 154.5 212 45.8
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.8e-35 153.7 218 43.6
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.8e-35 153.7 213 44.1
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 2.4e-35 153.3 236 43.6
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 3.1e-35 152.9 217 43.8
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 3.1e-35 152.9 223 44.4
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 3.1e-35 152.9 223 43.0
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 3.1e-35 152.9 217 42.9
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 3.1e-35 152.9 220 43.6
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 4.0e-35 152.5 212 44.8
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 5.2e-35 152.1 213 44.6
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 6.8e-35 151.8 217 42.9
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 6.8e-35 151.8 213 44.1
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.2e-34 151.0 87 83.9
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 1.2e-34 151.0 220 42.3
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 2.0e-34 150.2 87 82.8
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 2.0e-34 150.2 87 82.8
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 2.0e-34 150.2 212 44.3
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 2.6e-34 149.8 220 42.3
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 4.4e-34 149.1 228 42.1
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 5.8e-34 148.7 213 44.6
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 7.6e-34 148.3 225 44.4
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 7.6e-34 148.3 220 41.4
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 9.9e-34 147.9 214 41.6
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 9.9e-34 147.9 214 41.6
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 3.8e-33 146.0 237 41.4
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 6.4e-33 145.2 225 42.7
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 6.4e-33 145.2 215 42.3
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 6.4e-33 145.2 83 81.9
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 1.1e-32 144.4 215 41.4
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 1.4e-32 144.1 217 41.9
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 3.2e-32 142.9 83 79.5
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 4.2e-32 142.5 222 42.8
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 5.4e-32 142.1 237 40.5
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 5.4e-32 142.1 220 41.4
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 7.1e-32 141.7 87 75.9
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 7.1e-32 141.7 87 75.9
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 1.2e-31 141.0 87 77.0
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 2.1e-31 140.2 220 40.5
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 2.1e-31 140.2 89 78.7
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 2.7e-31 139.8 87 74.7
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 4.6e-31 139.0 94 71.3
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 4.6e-31 139.0 81 80.2
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.6e-31 139.0 83 77.1
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.6e-31 139.0 81 80.2
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 4.6e-31 139.0 216 43.1
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 1.7e-30 137.1 79 81.0
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.9e-30 136.0 81 79.0
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 5.1e-30 135.6 87 74.7
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 1.1e-29 134.4 84 75.0
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.5e-29 134.0 87 73.6
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.9e-29 133.7 83 75.9
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 2.1e-28 130.2 87 71.3
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 4.7e-28 129.0 89 73.0
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 1.8e-27 127.1 223 39.9
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 2.4e-27 126.7 128 53.9
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 3.1e-27 126.3 91 69.2
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 6.9e-27 125.2 84 69.0
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 6.9e-27 125.2 87 67.8
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 5.8e-26 122.1 80 76.2
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 5.8e-26 122.1 99 62.6
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 9.9e-26 121.3 87 66.7
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 8.4e-25 118.2 82 73.2
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 3.2e-24 116.3 118 53.4
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 1.2e-23 114.4 89 65.2
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.5e-21 106.7 232 35.3
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 3.3e-21 106.3 180 41.7
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 4.8e-20 102.4 178 38.2
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.1e-13 81.3 167 35.3
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 1.1e-13 81.3 44 88.6
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 3.8e-09 66.2 76 46.1
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 5.5e-08 62.4 44 68.2
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 2.1e-07 60.5 76 47.4
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.0e-06 56.6 39 64.1
SalBow1G5171 Salvia bowleyana HOM05D006214 ORTHO05D007723 8.7e-06 55.1 63 52.4


User provided reference genes

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