Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 4.5e-214 747.7 382 100.0
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 3.2e-191 671.8 383 88.8
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 3.1e-170 602.1 383 79.6
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 8.4e-168 594.0 384 78.6
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 7.1e-167 590.9 381 77.7
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 3.0e-165 585.5 383 77.5
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 1.4e-162 576.6 382 76.4
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 3.1e-162 575.5 383 76.0
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 9.0e-162 573.9 387 76.7
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 1.5e-161 573.2 383 76.0
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 5.8e-161 571.2 383 74.9
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 3.8e-160 568.5 383 77.3
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 8.4e-160 567.4 383 75.2
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 1.1e-159 567.0 382 76.2
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 4.2e-159 565.1 392 76.3
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 4.2e-159 565.1 382 75.1
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.2e-158 563.5 384 75.8
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 1.2e-158 563.5 383 73.9
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.6e-158 563.1 385 75.6
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.3e-157 560.1 383 73.9
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 1.7e-157 559.7 383 73.1
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 3.0e-157 558.9 381 74.0
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 8.7e-157 557.4 383 72.8
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 2.5e-156 555.8 384 73.2
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.5e-156 555.8 383 72.8
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 9.6e-156 553.9 381 73.2
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 1.3e-155 553.5 384 72.4
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 1.6e-155 553.1 383 73.6
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 1.6e-155 553.1 382 73.8
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 2.1e-155 552.7 384 72.7
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 3.6e-155 552.0 388 72.7
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 1.8e-154 549.7 403 70.7
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 6.9e-154 547.7 383 72.1
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.0e-154 547.4 393 70.5
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 1.2e-153 547.0 384 73.2
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 2.6e-153 545.8 383 73.1
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 5.8e-153 544.7 382 71.7
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 1.7e-152 543.1 384 72.9
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.7e-152 543.1 389 70.7
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 4.9e-152 541.6 384 72.1
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 6.4e-152 541.2 383 70.8
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 8.4e-152 540.8 411 67.9
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.4e-151 539.3 383 71.8
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 3.2e-151 538.9 377 72.9
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 4.2e-151 538.5 407 68.8
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 4.2e-151 538.5 366 76.5
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 4.2e-151 538.5 384 71.1
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 5.4e-151 538.1 436 66.5
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 1.2e-150 537.0 381 72.7
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 2.1e-150 536.2 384 71.9
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 2.7e-150 535.8 382 70.4
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 1.0e-149 533.9 413 67.8
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.0e-149 533.9 383 71.3
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 3.0e-149 532.3 383 71.0
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 3.0e-149 532.3 383 70.0
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 6.7e-149 531.2 383 69.7
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 8.7e-149 530.8 359 74.7
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 8.7e-149 530.8 384 71.6
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 2.5e-148 529.3 438 65.1
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 2.5e-148 529.3 382 69.4
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 4.3e-148 528.5 383 69.5
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 9.6e-148 527.3 384 69.3
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 9.6e-148 527.3 384 70.6
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 6.2e-147 524.6 383 69.5
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 6.2e-147 524.6 408 67.4
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.4e-146 523.5 383 68.9
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.0e-146 520.8 414 65.9
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 1.2e-145 520.4 383 68.9
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.5e-145 518.5 382 69.4
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 3.8e-144 515.4 382 69.4
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 4.9e-144 515.0 386 68.7
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 6.5e-144 514.6 382 68.3
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 8.4e-144 514.2 436 64.7
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 2.5e-143 512.7 382 68.1
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 4.2e-143 511.9 382 67.8
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 4.2e-143 511.9 383 67.6
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.2e-142 510.4 380 67.9
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 1.6e-142 510.0 386 67.9
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 2.1e-142 509.6 382 67.3
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 2.7e-142 509.2 382 68.1
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 1.1e-140 503.8 378 67.7
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 1.9e-140 503.1 383 67.4
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.9e-140 503.1 383 67.6
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 4.3e-140 501.9 383 66.1
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 5.7e-140 501.5 382 66.0
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 9.6e-140 500.7 383 67.1
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 8.2e-139 497.7 383 66.8
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 1.8e-138 496.5 383 66.6
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 3.1e-138 495.7 383 66.3
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 3.1e-138 495.7 383 66.3
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 5.8e-137 491.5 382 65.7
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 6.5e-136 488.0 383 65.5
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.2e-135 485.7 383 66.8
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 1.0e-133 480.7 326 73.9
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 3.9e-133 478.8 400 62.8
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 6.7e-133 478.0 418 62.2
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 9.7e-132 474.2 463 57.2
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 3.1e-130 469.2 382 62.8
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 1.2e-126 457.2 386 62.7
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 8.8e-125 451.1 335 69.3
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.1e-124 450.7 388 64.2
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.5e-124 449.5 386 63.2
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 4.4e-116 422.2 280 79.6
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 7.4e-116 421.4 387 59.4
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.1e-106 391.0 281 72.2
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 5.9e-81 305.4 414 44.7
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 2.3e-80 303.5 245 64.5
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 1.2e-70 271.2 462 37.7
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.2e-58 229.9 158 71.5
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 9.2e-58 228.4 341 40.8
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.8e-57 225.3 158 70.9
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.8e-57 225.3 158 70.3
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.1e-47 194.9 148 67.6
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 6.2e-46 189.1 158 62.0
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 3.1e-45 186.8 140 62.9
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.4e-42 177.2 129 67.4
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.3e-39 166.8 126 67.5
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 2.7e-33 147.1 102 64.7
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 4.6e-33 146.4 113 69.0
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 2.4e-29 134.0 103 62.1
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.3e-24 118.2 99 66.7
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 4.8e-22 109.8 90 65.6
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 1.4e-13 81.6 124 40.3
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 3.6e-09 67.0 163 30.7
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 6.1e-09 66.2 39 79.5
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 1.4e-08 65.1 39 76.9
GSVIVG01032303001 Vitis vinifera HOM05D002866 ORTHO05D440048 2.2e-06 57.8 33 84.8
Gorai.001G122500 Gossypium raimondii HOM05D000892 ORTHO05D000750 8.2e-06 55.8 160 26.9
QL01p012113 Quercus lobata HOM05D000892 ORTHO05D000750 8.2e-06 55.8 160 28.1


User provided reference genes

Program Settings