Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 1.8e-102 375.9 187 100.0
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 3.3e-85 318.5 187 81.3
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 3.1e-83 312.0 184 82.6
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 4.1e-83 311.6 186 80.6
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 5.3e-83 311.2 184 79.9
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 6.9e-83 310.8 187 80.7
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.5e-82 309.7 187 80.7
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 3.4e-82 308.5 179 81.0
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 3.4e-82 308.5 187 80.2
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 3.4e-82 308.5 187 79.1
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 5.9e-82 307.8 184 79.9
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.3e-81 306.6 187 81.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 3.8e-81 305.1 187 78.6
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 8.5e-81 303.9 187 78.6
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 8.5e-81 303.9 187 78.1
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.4e-80 303.1 187 78.1
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 1.9e-80 302.8 183 80.3
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 2.5e-80 302.4 183 78.7
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 7.2e-80 300.8 179 79.3
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 7.2e-80 300.8 179 79.3
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.2e-79 300.1 180 80.0
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 1.6e-79 299.7 186 75.8
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 3.6e-79 298.5 187 77.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 7.9e-79 297.4 179 77.7
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 7.9e-79 297.4 184 77.7
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 1.0e-78 297.0 184 78.3
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 1.4e-78 296.6 184 77.2
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.4e-78 296.6 187 75.9
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 1.4e-78 296.6 179 77.7
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.4e-78 296.6 183 76.5
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 1.8e-78 296.2 187 75.9
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 3.9e-78 295.0 179 76.0
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.9e-78 295.0 183 76.0
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 1.1e-77 293.5 177 79.1
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 2.5e-77 292.4 172 80.8
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.5e-77 292.4 179 78.2
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 4.3e-77 291.6 187 75.4
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 7.4e-77 290.8 185 73.5
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 9.7e-77 290.4 178 78.1
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 9.7e-77 290.4 183 76.0
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 9.7e-77 290.4 187 74.9
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 9.7e-77 290.4 179 77.1
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.7e-76 289.7 178 78.1
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 1.7e-76 289.7 185 73.5
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.7e-76 289.7 179 78.8
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 3.7e-76 288.5 182 78.0
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 6.3e-76 287.7 177 78.5
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 3.1e-75 285.4 183 77.0
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.2e-74 283.5 179 74.3
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 2.0e-74 282.7 185 71.9
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 2.6e-74 282.3 176 75.6
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 1.0e-73 280.4 183 76.0
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.7e-73 279.6 178 77.0
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.7e-73 279.6 179 73.2
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 2.2e-73 279.3 179 77.7
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 2.9e-73 278.9 185 72.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 5.0e-73 278.1 180 73.9
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 5.0e-73 278.1 179 74.3
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 8.5e-73 277.3 184 71.2
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 8.5e-73 277.3 180 75.6
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.1e-72 276.9 184 71.2
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 1.9e-72 276.2 179 72.6
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 2.5e-72 275.8 185 70.3
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 4.2e-72 275.0 177 76.3
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 5.5e-72 274.6 185 72.4
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 5.5e-72 274.6 179 70.9
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.2e-71 273.5 185 70.3
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.6e-71 273.1 192 69.8
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.6e-71 273.1 177 76.3
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 2.7e-71 272.3 179 68.7
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 2.7e-71 272.3 179 71.5
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 4.7e-71 271.6 179 70.9
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 2.3e-70 269.2 179 70.9
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 2.3e-70 269.2 179 70.9
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 5.1e-70 268.1 183 67.2
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 6.7e-70 267.7 197 68.0
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 6.7e-70 267.7 179 70.4
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.6e-69 265.8 184 69.6
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 2.6e-69 265.8 184 67.9
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 9.7e-69 263.8 179 69.8
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.3e-68 263.5 179 69.3
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 1.7e-68 263.1 202 66.3
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 2.2e-68 262.7 179 69.3
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 2.8e-68 262.3 180 69.4
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 4.8e-68 261.5 186 68.3
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 4.8e-68 261.5 186 66.7
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.4e-67 260.0 180 68.9
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 2.4e-67 259.2 184 68.5
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 4.5e-66 255.0 179 69.3
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 4.5e-66 255.0 161 75.8
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 5.9e-66 254.6 178 67.4
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 5.0e-65 251.5 182 66.5
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 8.5e-65 250.8 197 62.4
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 3.0e-62 242.3 180 66.1
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 4.0e-62 241.9 179 64.8
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 8.8e-62 240.7 179 63.7
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 8.5e-57 224.2 179 62.0
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 3.2e-56 222.2 180 58.9
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.5e-53 213.4 181 63.5
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.8e-52 208.4 115 86.1
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 1.6e-47 193.4 184 50.0
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 6.1e-47 191.4 117 75.2
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.8e-44 182.6 111 78.4
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 1.7e-41 173.3 93 86.0
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 6.6e-41 171.4 113 73.5
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 2.1e-39 166.4 115 64.3
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 9.8e-37 157.5 93 82.8
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.1e-35 154.1 108 71.3
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 6.6e-33 144.8 90 73.3
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 5.8e-29 131.7 91 71.4
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 2.9e-28 129.4 84 71.4
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 1.1e-27 127.5 86 72.1
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 1.9e-27 126.7 69 84.1
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.4e-27 125.2 69 81.2
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.6e-26 123.6 80 76.2
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 2.3e-25 119.8 119 54.6
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 3.0e-25 119.4 70 80.0
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 9.5e-24 114.4 79 65.8
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.2e-23 114.0 86 61.6
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 2.9e-20 102.8 59 76.3
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 3.2e-19 99.4 65 67.7
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 7.1e-19 98.2 66 69.7
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.0e-17 94.4 70 68.6
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 1.5e-13 80.5 52 78.8
Nitab4.5_0000324g0230 Nicotiana tabacum HOM05D004698 ORTHO05D005699 2.4e-06 56.6 145 31.0
Nitab4.5_0003890g0030 Nicotiana tabacum HOM05D004698 ORTHO05D005699 2.4e-06 56.6 145 31.0


User provided reference genes

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