Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1433 Trochodendron aralioides HOM05D007536 ORTHO05D009390 2.3e-111 407.1 190 100.0
TAR362G0895 Trochodendron aralioides HOM05D007536 ORTHO05D009390 6.9e-60 236.1 186 61.8
Nn1g02810 Nelumbo nucifera HOM05D007536 ORTHO05D009390 5.1e-47 193.4 188 53.7
Dinv18987 Davidia involucrata HOM05D007536 ORTHO05D009390 4.8e-45 186.8 188 50.5
GSVIVG01023504001 Vitis vinifera HOM05D007536 ORTHO05D009390 8.5e-42 176.0 190 46.3
CSS0008501 Camellia sinensis var. sinensis HOM05D007536 ORTHO05D009390 4.2e-41 173.7 190 45.3
Manes.08G053700 Manihot esculenta HOM05D007536 ORTHO05D009390 1.3e-37 162.2 183 47.5
CiPaw.15G107000 Carya illinoinensis HOM05D007536 ORTHO05D009390 2.8e-37 161.0 172 44.8
Dinv24676 Davidia involucrata HOM05D007536 ORTHO05D009390 1.8e-36 158.3 153 49.7
Hma1.2p1_2103F.1_g314080 Hydrangea macrophylla HOM05D007536 ORTHO05D009390 1.8e-36 158.3 185 45.4
Lj2C43T1 Lonicera japonica HOM05D007536 ORTHO05D009390 2.9e-34 151.0 189 43.4
Haze_04425 Corylus avellana HOM05D007536 ORTHO05D009390 6.5e-34 149.8 173 43.9
Aqoxy5G00211 Aquilegia oxysepala HOM05D007536 ORTHO05D009390 7.2e-33 146.4 170 47.6
Atru.chr2.985 Acer truncatum HOM05D007536 ORTHO05D009390 2.1e-32 144.8 189 41.8
QL03p030462 Quercus lobata HOM05D007536 ORTHO05D009390 2.1e-32 144.8 180 43.9
MBI10_g13809_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 6.7e-31 139.8 141 53.2
Cpa.g.sc162.41 Carica papaya HOM05D007536 ORTHO05D009390 1.5e-30 138.7 173 43.4
MD04G1230200 Malus domestica HOM05D007536 ORTHO05D009390 1.5e-30 138.7 185 42.2
Thecc.05G270900 Theobroma cacao HOM05D007536 ORTHO05D009390 7.5e-30 136.3 169 43.2
TWI38G0843 Tripterygium wilfordii HOM05D007536 ORTHO05D009390 3.7e-29 134.0 182 39.6
vmacro10366 Vaccinium macrocarpon HOM05D007536 ORTHO05D009390 4.1e-28 130.6 192 38.5
PSO210G0145 Papaver somniferum HOM05D007536 ORTHO05D009390 1.2e-27 129.0 127 51.2
Potri.019G019200 Populus trichocarpa HOM05D007536 ORTHO05D009390 2.0e-27 128.3 179 40.8
Sed0012628 Sechium edule HOM05D007536 ORTHO05D009390 2.0e-27 128.3 177 40.7
RcHm_v2.0_Chr3g0449641 Rosa chinensis HOM05D007536 ORTHO05D009390 2.6e-27 127.9 190 41.1
FAN09G4642 Fragaria x ananassa HOM05D007536 ORTHO05D009390 3.5e-27 127.5 189 40.7
COL.COLO4_15481 Corchorus olitorius HOM05D007536 ORTHO05D009390 4.5e-27 127.1 165 42.4
ClCG03G009740 Citrullus lanatus HOM05D007536 ORTHO05D009390 1.3e-26 125.6 177 40.7
FAN14G0137 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.7e-26 125.2 184 40.8
Prupe.6G350100 Prunus persica HOM05D007536 ORTHO05D009390 1.7e-26 125.2 125 48.0
Cc02_g08820 Coffea canephora HOM05D007536 ORTHO05D009390 2.2e-26 124.8 181 37.6
Sabra19G0031900 Salix brachista HOM05D007536 ORTHO05D009390 2.2e-26 124.8 177 40.1
Gohir.A13G167300 Gossypium hirsutum HOM05D007536 ORTHO05D009390 3.8e-26 124.0 150 40.7
Duzib177G0261 Durio zibethinus HOM05D007536 ORTHO05D009390 5.0e-26 123.6 177 39.5
FvH4_6g01910 Fragaria vesca HOM05D007536 ORTHO05D009390 5.0e-26 123.6 184 40.8
Gohir.D13G172800 Gossypium hirsutum HOM05D007536 ORTHO05D009390 6.5e-26 123.2 172 38.4
Rhsim09G0137000 Rhododendron simsii HOM05D007536 ORTHO05D009390 6.5e-26 123.2 187 40.6
AUR62004838 Chenopodium quinoa HOM05D007536 ORTHO05D009390 3.2e-25 120.9 190 38.4
Glyma.20G222900 Glycine max HOM05D007536 ORTHO05D009390 4.2e-25 120.6 186 37.1
Ciclev10019470m.g Citrus clementina HOM05D007536 ORTHO05D009390 5.5e-25 120.2 114 50.9
Gorai.013G187800 Gossypium raimondii HOM05D007536 ORTHO05D009390 5.5e-25 120.2 151 41.1
Gohir.A11G247400 Gossypium hirsutum HOM05D007536 ORTHO05D009390 7.2e-25 119.8 182 37.9
Gohir.D11G257700 Gossypium hirsutum HOM05D007536 ORTHO05D009390 7.2e-25 119.8 178 38.2
Gorai.007G276000 Gossypium raimondii HOM05D007536 ORTHO05D009390 7.2e-25 119.8 178 38.2
MELO3C010129.2 Cucumis melo HOM05D007536 ORTHO05D009390 1.2e-24 119.0 177 39.0
Oeu000315.1 Olea europaea HOM05D007536 ORTHO05D009390 3.6e-24 117.5 135 43.7
COL.COLO4_15479 Corchorus olitorius HOM05D007536 ORTHO05D009390 4.7e-24 117.1 151 42.4
Peaxi162Scf00528g00022 Petunia axillaris HOM05D007536 ORTHO05D009390 4.7e-24 117.1 181 39.8
Eucgr.B02149 Eucalyptus grandis HOM05D007536 ORTHO05D009390 6.1e-24 116.7 183 37.2
FAN05G1587 Fragaria x ananassa HOM05D007536 ORTHO05D009390 6.1e-24 116.7 125 46.4
CDE04G1469 Ceratophyllum demersum HOM05D007536 ORTHO05D009390 4.0e-23 114.0 115 49.6
Lalb_Chr02g0149121 Lupinus albus HOM05D007536 ORTHO05D009390 4.0e-23 114.0 186 37.1
Ah.04g163100 Amaranthus hybridus HOM05D007536 ORTHO05D009390 6.8e-23 113.2 198 34.8
Solyc04g010050.4 Solanum lycopersicum HOM05D007536 ORTHO05D009390 6.8e-23 113.2 159 40.9
Aa31LG11G11200 Aethionema arabicum HOM05D007536 ORTHO05D009390 2.0e-22 111.7 135 45.2
MSTRG.10543 Avicennia marina HOM05D007536 ORTHO05D009390 2.0e-22 111.7 185 36.8
Sopen04g005180 Solanum pennellii HOM05D007536 ORTHO05D009390 2.0e-22 111.7 159 40.9
Sc20g0000630 Simmondsia chinensis HOM05D007536 ORTHO05D009390 2.6e-22 111.3 184 36.4
Nitab4.5_0003780g0060 Nicotiana tabacum HOM05D007536 ORTHO05D009390 4.4e-22 110.5 174 39.1
AUR62040928 Chenopodium quinoa HOM05D007536 ORTHO05D009390 7.5e-22 109.8 196 37.2
FAN05G2252 Fragaria x ananassa HOM05D007536 ORTHO05D009390 7.5e-22 109.8 112 49.1
FAN14G3895 Fragaria x ananassa HOM05D007536 ORTHO05D009390 7.5e-22 109.8 112 49.1
CANSAT54G0748 Cannabis sativa HOM05D007536 ORTHO05D009390 2.2e-21 108.2 175 34.3
CsaV3_1G045080 Cucumis sativus L. HOM05D007536 ORTHO05D009390 2.2e-21 108.2 176 37.5
DCAR_023085 Daucus carota HOM05D007536 ORTHO05D009390 2.8e-21 107.8 184 35.3
Nitab4.5_0006737g0040 Nicotiana tabacum HOM05D007536 ORTHO05D009390 4.8e-21 107.1 174 37.9
Sp1g07270 Schrenkiella parvula HOM05D007536 ORTHO05D009390 6.3e-21 106.7 135 42.2
Sed0002849 Sechium edule HOM05D007536 ORTHO05D009390 6.3e-21 106.7 167 37.7
MBI07_g16910_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 1.1e-20 105.9 136 46.3
AT1G08610 Arabidopsis thaliana HOM05D007536 ORTHO05D009390 1.4e-20 105.5 133 40.6
Ca_10014_v3 Cicer arietinum L. HOM05D007536 ORTHO05D009390 3.1e-20 104.4 125 46.4
Phvul.008G151830 Phaseolus vulgaris HOM05D007536 ORTHO05D009390 3.1e-20 104.4 157 40.8
CAN.G358.142 Capsicum annuum HOM05D007536 ORTHO05D009390 9.1e-20 102.8 159 38.4
Thhalv10007213m.g Eutrema salsugineum HOM05D007536 ORTHO05D009390 1.6e-19 102.1 134 40.3
THA.LOC104821264 Tarenaya hassleriana HOM05D007536 ORTHO05D009390 1.6e-19 102.1 126 46.8
Carub.0001s0797 Capsella rubella HOM05D007536 ORTHO05D009390 2.0e-19 101.7 134 42.5
CARHR008520 Cardamine hirsuta HOM05D007536 ORTHO05D009390 1.7e-18 98.6 132 40.2
PGR142G0030 Punica granatum HOM05D007536 ORTHO05D009390 2.9e-18 97.8 186 38.2
AL1G19040 Arabidopsis lyrata HOM05D007536 ORTHO05D009390 6.5e-18 96.7 116 44.0
Lj5g0027095 Lotus japonicus HOM05D007536 ORTHO05D009390 8.5e-18 96.3 139 38.8
Actinidia34755 Actinidia chinensis HOM05D007536 ORTHO05D009390 5.5e-17 93.6 81 55.6
BraA09t41926Z Brassica rapa HOM05D007536 ORTHO05D009390 9.4e-17 92.8 108 42.6
VMungo0720G1101 Vigna mungo HOM05D007536 ORTHO05D009390 9.4e-17 92.8 137 40.9
A09p65820 Brassica napus HOM05D007536 ORTHO05D009390 1.2e-16 92.4 108 42.6
TPR.G22324 Trifolium pratense HOM05D007536 ORTHO05D009390 1.2e-16 92.4 113 44.2
C08p49910 Brassica napus HOM05D007536 ORTHO05D009390 1.6e-16 92.0 108 42.6
BcaC07g41933 Brassica carinata HOM05D007536 ORTHO05D009390 4.7e-16 90.5 108 41.7
Lalb_Chr21g0311181 Lupinus albus HOM05D007536 ORTHO05D009390 6.1e-16 90.1 172 34.9
Medtr1g080120 Medicago truncatula HOM05D007536 ORTHO05D009390 1.8e-15 88.6 138 41.3
BolC8t52519H Brassica oleracea HOM05D007536 ORTHO05D009390 2.3e-15 88.2 77 50.6
ECA233G3269 Erigeron canadensis HOM05D007536 ORTHO05D009390 4.0e-15 87.4 142 35.9
Migut.L01514 Erythranthe guttata HOM05D007536 ORTHO05D009390 1.2e-14 85.9 119 36.1
Lsat_1_v5_gn_8_24901 Lactuca sativa HOM05D007536 ORTHO05D009390 9.8e-14 82.8 151 33.1
SalBow1G3025 Salvia bowleyana HOM05D007536 ORTHO05D009390 1.3e-13 82.4 63 58.7
Psat6g142640 Pisum sativum HOM05D007536 ORTHO05D009390 1.1e-12 79.3 190 31.1
FAN02G3965 Fragaria x ananassa HOM05D007536 ORTHO05D009390 3.1e-12 77.8 71 53.5
HanXRQChr07g0204491 Helianthus annuus HOM05D007536 ORTHO05D009390 3.1e-12 77.8 142 35.2
ATR0736G097 Amborella trichopoda HOM05D007536 ORTHO05D009390 2.9e-10 71.2 69 47.8
SGA_v2.0_scaffold21G09411 Striga asiatica HOM05D005874 ORTHO05D007206 6.8e-07 60.1 46 54.3
PSO832G0816 Papaver somniferum HOM05D007536 ORTHO05D009390 2.0e-06 58.5 38 60.5
HPP92_018004 Vanilla planifolia HOM05D044659 ORTHO05D009390 5.7e-06 57.0 57 45.6
HPP92_026683 Vanilla planifolia HOM05D044659 ORTHO05D009390 5.7e-06 57.0 57 45.6


User provided reference genes

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