Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1409 Trochodendron aralioides HOM05D003192 ORTHO05D003596 1.0e-45 186.4 98 100.0
TAR625G0274 Trochodendron aralioides HOM05D003192 ORTHO05D003596 9.1e-34 146.7 89 86.5
TAR381G0021 Trochodendron aralioides HOM05D003192 ORTHO05D003596 1.9e-23 112.5 89 68.5
Nn5g29883 Nelumbo nucifera HOM05D003192 ORTHO05D003596 1.8e-18 95.9 77 64.9
Aqoxy5G01385 Aquilegia oxysepala HOM05D003192 ORTHO05D003596 5.9e-17 90.9 86 59.3
Dinv13601 Davidia involucrata HOM05D003192 ORTHO05D003596 5.5e-15 84.3 86 53.5
Cfa006881 Carpinus fangiana HOM05D003192 ORTHO05D003596 1.2e-14 83.2 86 55.8
Haze_03871 Corylus avellana HOM05D003192 ORTHO05D003596 1.6e-14 82.8 86 55.8
QL06p035789 Quercus lobata HOM05D003192 ORTHO05D003596 6.1e-14 80.9 86 55.8
Ciclev10024755m.g Citrus clementina HOM05D003192 ORTHO05D003596 8.0e-14 80.5 88 53.4
Dinv24148 Davidia involucrata HOM05D003192 ORTHO05D003596 1.8e-13 79.3 86 50.0
Dinv16002 Davidia involucrata HOM05D003192 ORTHO05D003596 2.3e-13 79.0 81 53.1
Eucgr.I00559 Eucalyptus grandis HOM05D003192 ORTHO05D003596 2.3e-13 79.0 85 51.8
Nitab4.5_0004153g0070 Nicotiana tabacum HOM05D003192 ORTHO05D003596 2.3e-13 79.0 89 49.4
Nitab4.5_0007624g0010 Nicotiana tabacum HOM05D003192 ORTHO05D003596 8.8e-13 77.0 89 47.2
Prupe.6G201700 Prunus persica HOM05D003192 ORTHO05D003596 8.8e-13 77.0 85 49.4
CiPaw.05G029500 Carya illinoinensis HOM05D003192 ORTHO05D003596 3.4e-12 75.1 89 43.8
Lsat_1_v5_gn_2_70360 Lactuca sativa HOM05D003192 ORTHO05D003596 3.4e-12 75.1 82 51.2
Sc03g0000330 Simmondsia chinensis HOM05D003192 ORTHO05D003596 3.4e-12 75.1 85 50.6
Sopen11g005420 Solanum pennellii HOM05D003192 ORTHO05D003596 3.4e-12 75.1 89 47.2
PGSC0003DMG400016132 Solanum tuberosum HOM05D003192 ORTHO05D003596 3.4e-12 75.1 89 47.2
Carub.0007s0215 Capsella rubella HOM05D003192 ORTHO05D003596 4.4e-12 74.7 86 48.8
CARHR246480 Cardamine hirsuta HOM05D003192 ORTHO05D003596 4.4e-12 74.7 88 48.9
CiPaw.08G140100 Carya illinoinensis HOM05D003192 ORTHO05D003596 9.8e-12 73.6 85 49.4
Duzib187G1957 Durio zibethinus HOM05D003192 ORTHO05D003596 9.8e-12 73.6 85 52.9
TWI53G1641 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 9.8e-12 73.6 87 50.6
AL7G12570 Arabidopsis lyrata HOM05D003192 ORTHO05D003596 1.3e-11 73.2 86 48.8
CAN.G1344.16 Capsicum annuum HOM05D003192 ORTHO05D003596 1.3e-11 73.2 89 47.2
Cfa005735 Carpinus fangiana HOM05D003192 ORTHO05D003596 1.3e-11 73.2 79 48.1
MBI16_g12462_MAGBIO Magnolia biondii HOM05D003192 ORTHO05D003596 1.7e-11 72.8 97 42.3
Sp7g35710 Schrenkiella parvula HOM05D003192 ORTHO05D003596 1.7e-11 72.8 86 47.7
Solyc11g010620.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 1.7e-11 72.8 86 47.7
DCAR_014184 Daucus carota HOM05D003192 ORTHO05D003596 2.2e-11 72.4 89 46.1
Duzib147G1583 Durio zibethinus HOM05D003192 ORTHO05D003596 2.2e-11 72.4 85 52.9
AT4G38062 Arabidopsis thaliana HOM05D003192 ORTHO05D003596 3.7e-11 71.6 86 48.8
CSS0015283 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 3.7e-11 71.6 89 49.4
A08p23070 Brassica napus HOM05D003192 ORTHO05D003596 6.3e-11 70.9 88 44.3
MD10G1054400 Malus domestica HOM05D003192 ORTHO05D003596 6.3e-11 70.9 85 51.8
Thhalv10027141m.g Eutrema salsugineum HOM05D003192 ORTHO05D003596 8.3e-11 70.5 88 45.5
MD05G1047500 Malus domestica HOM05D003192 ORTHO05D003596 8.3e-11 70.5 85 49.4
Atru.chr3.1246 Acer truncatum HOM05D003192 ORTHO05D003596 1.1e-10 70.1 87 48.3
Potri.011G131500 Populus trichocarpa HOM05D003192 ORTHO05D003596 1.1e-10 70.1 89 44.9
QL11p025213 Quercus lobata HOM05D003192 ORTHO05D003596 1.4e-10 69.7 89 40.4
TPR.G14606 Trifolium pratense HOM05D003192 ORTHO05D003596 1.4e-10 69.7 86 48.8
Gohir.D11G053800 Gossypium hirsutum HOM05D003192 ORTHO05D003596 2.4e-10 68.9 94 43.6
Gorai.007G058900 Gossypium raimondii HOM05D003192 ORTHO05D003596 2.4e-10 68.9 94 43.6
BraA08t34266Z Brassica rapa HOM05D003192 ORTHO05D003596 3.1e-10 68.6 88 43.2
QL11p025224 Quercus lobata HOM05D003192 ORTHO05D003596 3.1e-10 68.6 89 44.9
Aa31LG6G15020 Aethionema arabicum HOM05D003192 ORTHO05D003596 4.1e-10 68.2 88 45.5
Dinv36931 Davidia involucrata HOM05D003192 ORTHO05D003596 4.1e-10 68.2 89 49.4
Lj2P534T19 Lonicera japonica HOM05D003192 ORTHO05D003596 4.1e-10 68.2 107 36.4
BolC3t20120H Brassica oleracea HOM05D003192 ORTHO05D003596 5.4e-10 67.8 88 43.2
Thecc.01G090500 Theobroma cacao HOM05D003192 ORTHO05D003596 5.4e-10 67.8 87 47.1
BcaB03g12309 Brassica carinata HOM05D003192 ORTHO05D003596 7.0e-10 67.4 88 43.2
BcaC01g00350 Brassica carinata HOM05D003192 ORTHO05D003596 7.0e-10 67.4 88 43.2
C03p78760 Brassica napus HOM05D003192 ORTHO05D003596 7.0e-10 67.4 88 43.2
CANSAT01G3047 Cannabis sativa HOM05D003192 ORTHO05D003596 7.0e-10 67.4 86 47.7
AUR62012886 Chenopodium quinoa HOM05D003192 ORTHO05D003596 7.0e-10 67.4 86 44.2
Peaxi162Scf00191g00034 Petunia axillaris HOM05D003192 ORTHO05D003596 7.0e-10 67.4 85 48.2
TWI77G0115 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 7.0e-10 67.4 87 46.0
FAN28G2653 Fragaria x ananassa HOM05D003192 ORTHO05D003596 9.1e-10 67.0 86 41.9
AUR62027110 Chenopodium quinoa HOM05D003192 ORTHO05D003596 1.2e-09 66.6 86 45.3
Lj4g0006883 Lotus japonicus HOM05D003192 ORTHO05D003596 1.2e-09 66.6 86 46.5
Phvul.003G289000 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 1.6e-09 66.2 87 43.7
QL01p016133 Quercus lobata HOM05D003192 ORTHO05D003596 1.6e-09 66.2 64 53.1
Lj5C230T2 Lonicera japonica HOM05D003192 ORTHO05D003596 2.0e-09 65.9 84 44.0
Glyma.08G279600 Glycine max HOM05D003192 ORTHO05D003596 2.7e-09 65.5 86 46.5
Psat4g119640 Pisum sativum HOM05D003192 ORTHO05D003596 2.7e-09 65.5 88 45.5
Manes.13G100000 Manihot esculenta HOM05D003192 ORTHO05D003596 3.5e-09 65.1 86 47.7
Migut.K00798 Erythranthe guttata HOM05D003192 ORTHO05D003596 4.5e-09 64.7 89 44.9
FvH4_1g19631 Fragaria vesca HOM05D003192 ORTHO05D003596 4.5e-09 64.7 86 40.7
FAN23G2850 Fragaria x ananassa HOM05D003192 ORTHO05D003596 5.9e-09 64.3 86 41.9
PGR031G3296 Punica granatum HOM05D003192 ORTHO05D003596 5.9e-09 64.3 77 45.5
BcaB03g12311 Brassica carinata HOM05D003192 ORTHO05D003596 7.7e-09 63.9 78 44.9
Actinidia25308 Actinidia chinensis HOM05D003192 ORTHO05D003596 1.0e-08 63.5 79 48.1
Gohir.A11G207000 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.0e-08 63.5 85 45.9
Sabra11G0118600 Salix brachista HOM05D003192 ORTHO05D003596 1.0e-08 63.5 76 46.1
Glyma.18G147000 Glycine max HOM05D003192 ORTHO05D003596 1.3e-08 63.2 87 42.5
Medtr8g471150 Medicago truncatula HOM05D003192 ORTHO05D003596 1.7e-08 62.8 86 45.3
Haze_10522 Corylus avellana HOM05D003192 ORTHO05D003596 2.2e-08 62.4 57 56.1
EL10Ac9g22072 Beta vulgaris HOM05D003192 ORTHO05D003596 2.9e-08 62.0 86 41.9
Gorai.007G232500 Gossypium raimondii HOM05D003192 ORTHO05D003596 2.9e-08 62.0 85 44.7
Lalb_Chr05g0228511 Lupinus albus HOM05D003192 ORTHO05D003596 2.9e-08 62.0 86 41.9
THA.LOC104807671 Tarenaya hassleriana HOM05D003192 ORTHO05D003596 3.8e-08 61.6 88 43.2
Sabra16G0282500 Salix brachista HOM05D003192 ORTHO05D003596 5.0e-08 61.2 89 41.6
unitig_32.g10709 Utricularia gibba HOM05D003192 ORTHO05D003596 5.0e-08 61.2 89 40.4
ClCG01G018360 Citrullus lanatus HOM05D003192 ORTHO05D003596 6.5e-08 60.8 92 39.1
Ca_00164_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 8.5e-08 60.5 76 44.7
Cc07_g14090 Coffea canephora HOM05D003192 ORTHO05D003596 8.5e-08 60.5 90 38.9
MELO3C007714.2 Cucumis melo HOM05D003192 ORTHO05D003596 8.5e-08 60.5 92 38.0
FAN19G3065 Fragaria x ananassa HOM05D003192 ORTHO05D003596 8.5e-08 60.5 81 39.5
vmacro13008 Vaccinium macrocarpon HOM05D003192 ORTHO05D003596 8.5e-08 60.5 89 43.8
Gohir.A11G050500 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.1e-07 60.1 82 43.9
Gohir.D11G216300 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.1e-07 60.1 85 43.5
Medtr5g032080 Medicago truncatula HOM05D003192 ORTHO05D003596 1.1e-07 60.1 71 49.3
TPR.G9507 Trifolium pratense HOM05D003192 ORTHO05D003596 1.1e-07 60.1 83 41.0
Psat1g214080 Pisum sativum HOM05D003192 ORTHO05D003596 1.5e-07 59.7 84 42.9
Ah.01g007410 Amaranthus hybridus HOM05D003192 ORTHO05D003596 2.5e-07 58.9 86 38.4
Rhsim10G0172900 Rhododendron simsii HOM05D003192 ORTHO05D003596 3.2e-07 58.5 82 45.1
Ca_22609_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 4.2e-07 58.2 88 43.2
CsaV3_6G044990 Cucumis sativus L. HOM05D003192 ORTHO05D003596 4.2e-07 58.2 92 37.0
FvH4_2g11711 Fragaria vesca HOM05D003192 ORTHO05D003596 5.5e-07 57.8 73 39.7
FAN24G0742 Fragaria x ananassa HOM05D003192 ORTHO05D003596 5.5e-07 57.8 73 39.7
Glyma.09G199166 Glycine max HOM05D003192 ORTHO05D003596 5.5e-07 57.8 69 49.3
TPR.G39012 Trifolium pratense HOM05D003192 ORTHO05D003596 7.2e-07 57.4 71 47.9
ECA233G2454 Erigeron canadensis HOM05D000169 ORTHO05D003596 9.4e-07 57.0 67 44.8
Prupe.8G069900 Prunus persica HOM05D003192 ORTHO05D003596 9.4e-07 57.0 78 44.9
Medtr2g009620 Medicago truncatula HOM05D003192 ORTHO05D003596 1.2e-06 56.6 85 38.8
arahy.Tifrunner.gnm1.ann1.T6BZ3D Arachis hypogaea HOM05D003192 ORTHO05D003596 1.6e-06 56.2 85 38.8
Phvul.002G147100 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 1.6e-06 56.2 84 42.9
RcHm_v2.0_Chr2g0111201 Rosa chinensis HOM05D003192 ORTHO05D003596 1.6e-06 56.2 69 43.5
VMungo1215G1834 Vigna mungo HOM05D003192 ORTHO05D003596 1.6e-06 56.2 64 50.0
Glyma.01G023100 Glycine max HOM05D003192 ORTHO05D003596 3.6e-06 55.1 69 46.4
Sed0023170 Sechium edule HOM05D003192 ORTHO05D003596 3.6e-06 55.1 92 35.9
ECA238G4297 Erigeron canadensis HOM05D003192 ORTHO05D003596 6.1e-06 54.3 64 45.3
Sed0023722 Sechium edule HOM05D003192 ORTHO05D003596 6.1e-06 54.3 92 35.9


User provided reference genes

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