Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1399 Trochodendron aralioides HOM05D000225 ORTHO05D011080 8.1e-49 196.8 104 100.0
TAR362G1029 Trochodendron aralioides HOM05D000225 ORTHO05D003554 1.0e-19 100.1 58 86.2
Aqoxy2G03515 Aquilegia oxysepala HOM05D000225 ORTHO05D003554 3.4e-15 85.1 58 72.4
Lj6A653G77 Lonicera japonica HOM05D000225 ORTHO05D003554 2.5e-13 79.0 58 63.8
Dinv44611 Davidia involucrata HOM05D000225 ORTHO05D003554 4.2e-13 78.2 58 65.5
Cfa008400 Carpinus fangiana HOM05D000225 ORTHO05D003554 2.1e-12 75.9 58 62.1
Manes.15G035700 Manihot esculenta HOM05D000225 ORTHO05D003554 3.6e-12 75.1 52 67.3
PSO238G0035 Papaver somniferum HOM05D000225 ORTHO05D003554 7.9e-12 73.9 58 62.1
Potri.010G078700 Populus trichocarpa HOM05D000225 ORTHO05D003554 7.9e-12 73.9 54 66.7
Sabra10G0064600 Salix brachista HOM05D000225 ORTHO05D003554 7.9e-12 73.9 54 64.8
CSS0010297 Camellia sinensis var. sinensis HOM05D000225 ORTHO05D003554 1.0e-11 73.6 58 63.8
Haze_11269 Corylus avellana HOM05D000225 ORTHO05D003554 1.0e-11 73.6 58 58.6
Sabra08G0122400 Salix brachista HOM05D000225 ORTHO05D003554 1.0e-11 73.6 54 64.8
SHI00572 Sapria himalayana HOM05D000225 ORTHO05D003554 1.0e-11 73.6 57 61.4
MD13G1203700 Malus domestica HOM05D000225 ORTHO05D003554 1.8e-11 72.8 58 62.1
CANSAT78G0865 Cannabis sativa HOM05D000225 ORTHO05D003554 2.3e-11 72.4 58 60.3
Ciclev10006699m.g Citrus clementina HOM05D000225 ORTHO05D011080 2.3e-11 72.4 58 53.4
Ciclev10004551m.g Citrus clementina HOM05D000225 ORTHO05D003554 3.0e-11 72.0 58 53.4
Hma1.2p1_2099F.1_g313990 Hydrangea macrophylla HOM05D000225 ORTHO05D003554 3.0e-11 72.0 58 60.3
DCAR_002357 Daucus carota HOM05D000225 ORTHO05D003554 3.9e-11 71.6 58 60.3
PSO210G5248 Papaver somniferum HOM05D000225 ORTHO05D003554 5.1e-11 71.2 58 58.6
Potri.008G160501 Populus trichocarpa HOM05D000225 ORTHO05D003554 1.5e-10 69.7 58 60.3
PGR004G2440 Punica granatum HOM05D000225 ORTHO05D003554 1.5e-10 69.7 54 57.4
CiPaw.01G192400 Carya illinoinensis HOM05D000225 ORTHO05D003554 2.0e-10 69.3 58 56.9
GSVIVG01018093001 Vitis vinifera HOM05D000225 ORTHO05D003554 2.0e-10 69.3 58 56.9
MELO3C006481.2 Cucumis melo HOM05D000225 ORTHO05D003554 2.5e-10 68.9 58 56.9
MBI04_g35054_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D003554 3.3e-10 68.6 56 60.7
Potri.008G160600 Populus trichocarpa HOM05D000225 ORTHO05D003554 3.3e-10 68.6 54 61.1
Cc00_g20680 Coffea canephora HOM05D000225 ORTHO05D003554 4.3e-10 68.2 54 59.3
Ca_26325_v3 Cicer arietinum L. HOM05D000225 ORTHO05D003554 5.7e-10 67.8 53 62.3
HanXRQChr03g0092501 Helianthus annuus HOM05D000225 ORTHO05D003554 7.4e-10 67.4 58 55.2
RcHm_v2.0_Chr4g0389541 Rosa chinensis HOM05D000225 ORTHO05D003554 7.4e-10 67.4 58 56.9
Sed0011890 Sechium edule HOM05D000225 ORTHO05D003554 7.4e-10 67.4 89 46.1
Lj6g0021940 Lotus japonicus HOM05D000225 ORTHO05D003554 9.7e-10 67.0 54 61.1
Gohir.A10G118660 Gossypium hirsutum HOM05D000225 ORTHO05D003554 1.3e-09 66.6 54 61.1
Gohir.D10G147500 Gossypium hirsutum HOM05D000225 ORTHO05D003554 1.3e-09 66.6 54 61.1
Gorai.011G164600 Gossypium raimondii HOM05D000225 ORTHO05D003554 1.3e-09 66.6 54 61.1
Medtr5g042440 Medicago truncatula HOM05D000225 ORTHO05D003554 2.2e-09 65.9 54 61.1
Nn1g02546 Nelumbo nucifera HOM05D000225 ORTHO05D011080 2.2e-09 65.9 59 59.3
MSTRG.4088 Avicennia marina HOM05D000225 ORTHO05D003554 2.8e-09 65.5 58 56.9
Duzib151G1111 Durio zibethinus HOM05D000225 ORTHO05D003554 2.8e-09 65.5 54 61.1
Nn1g02547 Nelumbo nucifera HOM05D000225 ORTHO05D003554 2.8e-09 65.5 58 56.9
Prupe.1G027000 Prunus persica HOM05D000225 ORTHO05D003554 2.8e-09 65.5 58 55.2
Rhsim02G0032400 Rhododendron simsii HOM05D000225 ORTHO05D003554 2.8e-09 65.5 54 55.6
arahy.Tifrunner.gnm1.ann1.2WY12S Arachis hypogaea HOM05D000225 ORTHO05D003554 3.7e-09 65.1 54 55.6
Eucgr.H03181 Eucalyptus grandis HOM05D000225 ORTHO05D003554 3.7e-09 65.1 58 55.2
QL06p015040 Quercus lobata HOM05D000225 ORTHO05D003554 4.8e-09 64.7 58 56.9
Thecc.04G243700 Theobroma cacao HOM05D000225 ORTHO05D003554 4.8e-09 64.7 54 57.4
TPR.G22481 Trifolium pratense HOM05D000225 ORTHO05D003554 4.8e-09 64.7 54 59.3
TWI09G0570 Tripterygium wilfordii HOM05D000225 ORTHO05D003554 6.3e-09 64.3 58 53.4
Lsat_1_v5_gn_3_124400 Lactuca sativa HOM05D000225 ORTHO05D003554 8.2e-09 63.9 58 53.4
Psat6g102960 Pisum sativum HOM05D000225 ORTHO05D003554 8.2e-09 63.9 54 59.3
Nn3g19499 Nelumbo nucifera HOM05D000225 ORTHO05D003554 1.1e-08 63.5 58 55.2
COL.COLO4_15766 Corchorus olitorius HOM05D000225 ORTHO05D003554 1.4e-08 63.2 61 54.1
CsaV3_3G012700 Cucumis sativus L. HOM05D000225 ORTHO05D003554 1.4e-08 63.2 58 53.4
FvH4_4g02221 Fragaria vesca HOM05D000225 ORTHO05D003554 1.4e-08 63.2 58 53.4
FAN12G1174 Fragaria x ananassa HOM05D000225 ORTHO05D003554 1.4e-08 63.2 58 53.4
Hund05492 Selenicereus undatus HOM05D000225 ORTHO05D003554 1.4e-08 63.2 61 54.1
Atru.chr4.2285 Acer truncatum HOM05D000225 ORTHO05D003554 1.8e-08 62.8 58 55.2
MSTRG.9933 Avicennia marina HOM05D000225 ORTHO05D003554 1.8e-08 62.8 50 60.0
Sc19g0003890 Simmondsia chinensis HOM05D000225 ORTHO05D003554 2.4e-08 62.4 54 53.7
FAN17G2834 Fragaria x ananassa HOM05D000225 ORTHO05D003554 3.1e-08 62.0 58 51.7
Aqoxy5G01727 Aquilegia oxysepala HOM05D000225 ORTHO05D003554 4.1e-08 61.6 49 57.1
Gohir.D09G224100 Gossypium hirsutum HOM05D000225 ORTHO05D003554 4.1e-08 61.6 54 55.6
Gorai.006G245600 Gossypium raimondii HOM05D000225 ORTHO05D003554 4.1e-08 61.6 54 55.6
MBI16_g10978_MAGBIO Magnolia biondii HOM05D006999 ORTHO05D003554 4.1e-08 61.6 52 57.7
SGA_v2.0_scaffold101G29773 Striga asiatica HOM05D000225 ORTHO05D003554 4.1e-08 61.6 58 55.2
arahy.Tifrunner.gnm1.ann1.35XI12 Arachis hypogaea HOM05D000225 ORTHO05D003554 5.3e-08 61.2 54 53.7
FAN23G2134 Fragaria x ananassa HOM05D000225 ORTHO05D003554 5.3e-08 61.2 52 53.8
HanXRQChr13g0424591 Helianthus annuus HOM05D000225 ORTHO05D003554 5.3e-08 61.2 61 54.1
DCAR_010965 Daucus carota HOM05D000225 ORTHO05D003554 6.9e-08 60.8 79 45.6
Lj7C13T11 Lonicera japonica HOM05D000225 ORTHO05D003554 6.9e-08 60.8 56 53.6
Lalb_Chr03g0037921 Lupinus albus HOM05D000225 ORTHO05D003554 6.9e-08 60.8 64 45.3
FAN22G1499 Fragaria x ananassa HOM05D000225 ORTHO05D003554 9.1e-08 60.5 58 50.0
SalBow2G2098 Salvia bowleyana HOM05D000225 ORTHO05D003554 9.1e-08 60.5 58 50.0
RcHm_v2.0_Chr2g0102941 Rosa chinensis HOM05D000225 ORTHO05D003554 1.2e-07 60.1 52 57.7
FAN28G2213 Fragaria x ananassa HOM05D000225 ORTHO05D003554 1.5e-07 59.7 52 51.9
vmacro15400 Vaccinium macrocarpon HOM05D000225 ORTHO05D003554 2.0e-07 59.3 73 46.6
FAN26G1212 Fragaria x ananassa HOM05D000225 ORTHO05D003554 3.4e-07 58.5 51 51.0
Glyma.02G000400 Glycine max HOM05D000225 ORTHO05D003554 3.4e-07 58.5 54 51.9
Prupe.7G147300 Prunus persica HOM05D000225 ORTHO05D003554 3.4e-07 58.5 51 54.9
Haze_01638 Corylus avellana HOM05D000225 ORTHO05D003554 4.5e-07 58.2 51 51.0
Sopen09g032130 Solanum pennellii HOM05D000225 ORTHO05D003554 4.5e-07 58.2 54 50.0
ATR0661G139 Amborella trichopoda HOM05D000225 ORTHO05D003554 5.9e-07 57.8 52 57.7
FvH4_1g14270 Fragaria vesca HOM05D000225 ORTHO05D003554 5.9e-07 57.8 52 50.0
TWI09G0751 Tripterygium wilfordii HOM05D000225 ORTHO05D003554 5.9e-07 57.8 51 54.9
GSVIVG01019039001 Vitis vinifera HOM05D000225 ORTHO05D003554 5.9e-07 57.8 51 52.9
DCAR_007516 Daucus carota HOM05D000225 ORTHO05D003554 7.7e-07 57.4 92 40.2
Atru.chr3.495 Acer truncatum HOM05D000225 ORTHO05D003554 1.0e-06 57.0 92 40.2
MD02G1156500 Malus domestica HOM05D000225 ORTHO05D003554 1.0e-06 57.0 51 52.9
Solyc02g065520.1 Solanum lycopersicum HOM05D000225 ORTHO05D003554 1.0e-06 57.0 56 51.8
Sopen02g015720 Solanum pennellii HOM05D000225 ORTHO05D003554 1.0e-06 57.0 56 51.8
PGSC0003DMG400001185 Solanum tuberosum HOM05D000225 ORTHO05D003554 1.0e-06 57.0 56 53.6
PGSC0003DMG400006086 Solanum tuberosum HOM05D000225 ORTHO05D003554 1.0e-06 57.0 54 44.4
HPP92_014519 Vanilla planifolia HOM05D001408 ORTHO05D003554 1.0e-06 57.0 52 57.7
CAN.G93.19 Capsicum annuum HOM05D000225 ORTHO05D003554 1.3e-06 56.6 56 51.8
Peaxi162Scf01416g00014 Petunia axillaris HOM05D000225 ORTHO05D003554 1.3e-06 56.6 54 42.6
Solyc09g083210.3 Solanum lycopersicum HOM05D000225 ORTHO05D003554 1.3e-06 56.6 54 48.1
Nitab4.5_0004292g0040 Nicotiana tabacum HOM05D000225 ORTHO05D003554 1.7e-06 56.2 56 50.0
PGSC0003DMG400006087 Solanum tuberosum HOM05D000225 ORTHO05D003554 1.7e-06 56.2 54 44.4
PGSC0003DMG400006088 Solanum tuberosum HOM05D000225 ORTHO05D003554 1.7e-06 56.2 54 44.4
Nitab4.5_0000090g0210 Nicotiana tabacum HOM05D000225 ORTHO05D003554 2.2e-06 55.8 56 50.0
CAN.G626.4 Capsicum annuum HOM05D000225 ORTHO05D003554 2.9e-06 55.5 54 44.4
Ciclev10027414m.g Citrus clementina HOM05D000225 ORTHO05D003554 2.9e-06 55.5 51 51.0
Eucgr.H01926 Eucalyptus grandis HOM05D000225 ORTHO05D003554 2.9e-06 55.5 89 34.8
Hma1.2p1_0652F.1_g196000 Hydrangea macrophylla HOM05D000225 ORTHO05D003554 2.9e-06 55.5 49 59.2
Hma1.2p1_2980F.1_g331210 Hydrangea macrophylla HOM05D006999 ORTHO05D008936 2.9e-06 55.5 49 59.2
TAR628G1589 Trochodendron aralioides HOM05D000225 ORTHO05D003554 2.9e-06 55.5 51 52.9
Dinv26791 Davidia involucrata HOM05D000225 ORTHO05D003554 3.8e-06 55.1 56 51.8
AUR62008808 Chenopodium quinoa HOM05D000225 ORTHO05D003554 6.5e-06 54.3 54 50.0
TAR376G0295 Trochodendron aralioides HOM05D000225 ORTHO05D003554 8.5e-06 53.9 51 51.0
VMungo0720G0757 Vigna mungo HOM05D000225 ORTHO05D003554 8.5e-06 53.9 54 48.1


User provided reference genes

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