Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1375 Trochodendron aralioides HOM05D006988 ORTHO05D008731 2.8e-123 445.3 221 100.0
Nn6g33931 Nelumbo nucifera HOM05D006988 ORTHO05D008731 1.3e-99 366.7 226 81.4
Aqoxy7G00790 Aquilegia oxysepala HOM05D006988 ORTHO05D008731 2.2e-88 329.3 223 76.2
MBI04_g09512_MAGBIO Magnolia biondii HOM05D006988 ORTHO05D008731 2.3e-85 319.3 210 74.8
CiPaw.13G030900 Carya illinoinensis HOM05D006988 ORTHO05D008731 6.7e-85 317.8 214 72.0
ATR0317G076 Amborella trichopoda HOM05D006988 ORTHO05D008731 1.4e-82 310.1 222 69.4
CSS0001978 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 1.8e-82 309.7 191 77.0
CSS0011747 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 4.1e-82 308.5 191 76.4
Haze_02728 Corylus avellana HOM05D006988 ORTHO05D008731 9.0e-82 307.4 196 73.5
Atru.chr5.214 Acer truncatum HOM05D006988 ORTHO05D008731 1.5e-81 306.6 218 68.3
Gohir.D07G153600 Gossypium hirsutum HOM05D006988 ORTHO05D008731 7.7e-81 304.3 216 69.4
Gorai.001G175700 Gossypium raimondii HOM05D006988 ORTHO05D008731 2.2e-80 302.8 216 69.0
Prupe.2G135300 Prunus persica HOM05D006988 ORTHO05D008731 3.8e-80 302.0 198 73.7
PSO170G6265 Papaver somniferum HOM05D006988 ORTHO05D008731 5.0e-80 301.6 182 80.2
Gohir.A07G147500 Gossypium hirsutum HOM05D006988 ORTHO05D008731 8.5e-80 300.8 208 69.7
FAN03G1007 Fragaria x ananassa HOM05D006988 ORTHO05D008731 1.1e-79 300.4 198 70.7
COL.COLO4_12466 Corchorus olitorius HOM05D006988 ORTHO05D008731 2.5e-79 299.3 222 67.6
FAN06G3033 Fragaria x ananassa HOM05D006988 ORTHO05D008731 3.2e-79 298.9 213 67.6
Duzib133G0505 Durio zibethinus HOM05D006988 ORTHO05D008731 5.5e-79 298.1 202 70.3
FvH4_7g10720 Fragaria vesca HOM05D006988 ORTHO05D008731 7.2e-79 297.7 191 73.8
FAN06G2548 Fragaria x ananassa HOM05D006988 ORTHO05D008731 7.2e-79 297.7 191 73.8
Dinv43657 Davidia involucrata HOM05D006988 ORTHO05D008731 9.4e-79 297.4 203 69.5
Lj9A563T51 Lonicera japonica HOM05D006988 ORTHO05D008731 2.1e-78 296.2 221 66.1
QL04p035766 Quercus lobata HOM05D006988 ORTHO05D008731 2.1e-78 296.2 213 67.6
AUR62004148 Chenopodium quinoa HOM05D006988 ORTHO05D008731 6.1e-78 294.7 184 77.2
Rhsim07G0032500 Rhododendron simsii HOM05D006988 ORTHO05D008731 6.1e-78 294.7 188 73.9
Thecc.01G386200 Theobroma cacao HOM05D006988 ORTHO05D008731 6.1e-78 294.7 214 68.2
AUR62013709 Chenopodium quinoa HOM05D006988 ORTHO05D008731 7.9e-78 294.3 184 77.2
MD07G1111900 Malus domestica HOM05D006988 ORTHO05D008731 2.3e-77 292.7 187 73.8
Potri.014G058400 Populus trichocarpa HOM05D006988 ORTHO05D008731 3.9e-77 292.0 210 70.0
VMungo1383G3408 Vigna mungo HOM05D006988 ORTHO05D008731 3.9e-77 292.0 210 66.7
Hund17063 Selenicereus undatus HOM05D006988 ORTHO05D008731 6.7e-77 291.2 183 76.0
CANSAT01G0747 Cannabis sativa HOM05D006988 ORTHO05D008731 8.8e-77 290.8 219 69.4
Sabra14G0042600 Salix brachista HOM05D006988 ORTHO05D008731 3.3e-76 288.9 190 74.2
EL10Ac1g00818 Beta vulgaris HOM05D006988 ORTHO05D008731 4.3e-76 288.5 202 71.3
ClCG06G003000 Citrullus lanatus HOM05D006988 ORTHO05D008731 5.7e-76 288.1 201 68.2
CARHR248070 Cardamine hirsuta HOM05D006988 ORTHO05D008731 7.4e-76 287.7 191 70.2
MELO3C021141.2 Cucumis melo HOM05D006988 ORTHO05D008731 9.7e-76 287.3 201 68.2
Phvul.008G157000 Phaseolus vulgaris HOM05D006988 ORTHO05D008731 9.7e-76 287.3 204 67.2
Sed0016586 Sechium edule HOM05D006988 ORTHO05D008731 9.7e-76 287.3 187 71.7
Manes.01G270400 Manihot esculenta HOM05D006988 ORTHO05D008731 1.3e-75 287.0 203 68.0
Peaxi162Scf00350g00014 Petunia axillaris HOM05D006988 ORTHO05D008731 1.3e-75 287.0 222 64.9
THA.LOC104814078 Tarenaya hassleriana HOM05D006988 ORTHO05D008731 3.7e-75 285.4 221 63.8
CsaV3_6G009120 Cucumis sativus L. HOM05D006988 ORTHO05D008731 6.3e-75 284.6 187 71.1
Lj1g0025695 Lotus japonicus HOM05D006988 ORTHO05D008731 1.8e-74 283.1 199 66.8
Solyc10g018590.2 Solanum lycopersicum HOM05D006988 ORTHO05D008731 1.8e-74 283.1 174 76.4
Medtr7g444820 Medicago truncatula HOM05D006988 ORTHO05D008731 2.4e-74 282.7 184 72.8
Glyma.11G164037 Glycine max HOM05D006988 ORTHO05D008731 3.1e-74 282.3 204 66.7
Cc02_g24580 Coffea canephora HOM05D006988 ORTHO05D008731 6.9e-74 281.2 195 70.8
PGSC0003DMG400011763 Solanum tuberosum HOM05D006988 ORTHO05D008731 6.9e-74 281.2 174 75.3
Sopen10g008330 Solanum pennellii HOM05D006988 ORTHO05D008731 1.2e-73 280.4 203 67.0
Glyma.01G076100 Glycine max HOM05D006988 ORTHO05D008731 2.6e-73 279.3 213 63.8
Carub.0006s3719 Capsella rubella HOM05D006988 ORTHO05D008731 3.4e-73 278.9 186 68.8
arahy.Tifrunner.gnm1.ann1.EWF75K Arachis hypogaea HOM05D006988 ORTHO05D008731 7.7e-73 277.7 212 63.7
arahy.Tifrunner.gnm1.ann1.I2GGUW Arachis hypogaea HOM05D006988 ORTHO05D008731 7.7e-73 277.7 212 63.7
Hma1.2p1_0341F.1_g130300 Hydrangea macrophylla HOM05D006988 ORTHO05D008731 7.7e-73 277.7 201 66.7
SEGI_39512 Sequoiadendron giganteum HOM05D006988 ORTHO05D008731 7.7e-73 277.7 181 70.7
AT4G00030 Arabidopsis thaliana HOM05D006988 ORTHO05D008731 1.0e-72 277.3 208 64.4
Migut.B01575 Erythranthe guttata HOM05D006988 ORTHO05D008731 1.0e-72 277.3 200 66.0
Sp6g00080 Schrenkiella parvula HOM05D006988 ORTHO05D008731 1.0e-72 277.3 209 63.6
Ca_27093_v3 Cicer arietinum L. HOM05D006988 ORTHO05D008731 1.3e-72 276.9 200 66.5
Lsat_1_v5_gn_7_10320 Lactuca sativa HOM05D006988 ORTHO05D008731 1.7e-72 276.6 213 64.8
SalBow5G4855 Salvia bowleyana HOM05D006988 ORTHO05D008731 1.7e-72 276.6 204 66.7
AL6G53480 Arabidopsis lyrata HOM05D006988 ORTHO05D008731 2.9e-72 275.8 200 65.5
BcaB01g02207 Brassica carinata HOM05D006988 ORTHO05D008731 5.0e-72 275.0 184 69.6
Nitab4.5_0000882g0050 Nicotiana tabacum HOM05D006988 ORTHO05D008731 6.5e-72 274.6 197 69.5
BcaC04g24207 Brassica carinata HOM05D006988 ORTHO05D008731 1.4e-71 273.5 175 71.4
BolC9t52942H Brassica oleracea HOM05D006988 ORTHO05D008731 1.4e-71 273.5 175 71.4
C09p00070 Brassica napus HOM05D006988 ORTHO05D008731 2.5e-71 272.7 203 65.0
BraA09t35681Z Brassica rapa HOM05D006988 ORTHO05D008731 2.5e-71 272.7 203 65.0
DCAR_031865 Daucus carota HOM05D006988 ORTHO05D008731 7.2e-71 271.2 200 66.5
CAN.G160.69 Capsicum annuum HOM05D006988 ORTHO05D008731 2.1e-70 269.6 188 68.6
ECA236G3211 Erigeron canadensis HOM05D006988 ORTHO05D008731 3.6e-70 268.9 199 66.3
Nitab4.5_0001501g0030 Nicotiana tabacum HOM05D006988 ORTHO05D008731 6.7e-69 264.6 176 72.7
COL.COLO4_37993 Corchorus olitorius HOM05D006988 ORTHO05D008731 1.1e-68 263.8 223 61.4
Aa31LG5G100 Aethionema arabicum HOM05D006988 ORTHO05D008731 5.7e-68 261.5 228 58.8
HanXRQChr06g0168881 Helianthus annuus HOM05D006988 ORTHO05D008731 5.3e-66 255.0 191 64.4
SGA_v2.0_scaffold153G36954 Striga asiatica HOM05D006988 ORTHO05D008731 7.0e-66 254.6 236 56.4
Ciclev10022767m.g Citrus clementina HOM05D006988 ORTHO05D008731 1.6e-65 253.4 141 83.7
Pp3c14_7270 Physcomitrium patens HOM05D006988 ORTHO05D008731 5.0e-64 248.4 220 59.5
RcHm_v2.0_Chr1g0348671 Rosa chinensis HOM05D006988 ORTHO05D008731 1.5e-63 246.9 181 66.3
TPR.G39083 Trifolium pratense HOM05D006988 ORTHO05D008731 1.9e-63 246.5 144 79.9
TWI59G0585 Tripterygium wilfordii HOM05D006988 ORTHO05D008731 5.5e-63 245.0 213 59.2
GSVIVG01018209001 Vitis vinifera HOM05D006988 ORTHO05D008731 4.7e-62 241.9 141 80.1
Cpa.g.sc620.2 Carica papaya HOM05D006988 ORTHO05D008731 5.2e-61 238.4 187 66.8
Zm00001eb257570 Zea mays HOM05D006988 ORTHO05D008731 3.3e-60 235.7 173 63.0
FAN01G2452 Fragaria x ananassa HOM05D006988 ORTHO05D008731 5.7e-60 235.0 157 71.3
Mapoly0004s0296 Marchantia polymorpha HOM05D006988 ORTHO05D008731 1.3e-59 233.8 169 63.3
Os04g0551700 Oryza sativa ssp. japonica HOM05D006988 ORTHO05D008731 1.7e-59 233.4 173 60.7
Ah.16g110010 Amaranthus hybridus HOM05D006988 ORTHO05D008731 4.1e-58 228.8 181 63.5
SMO367G0814 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 2.0e-57 226.5 173 59.5
SMO367G0459 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 1.0e-56 224.2 173 59.0
Sc23g0003890 Simmondsia chinensis HOM05D006988 ORTHO05D008731 8.5e-56 221.1 164 66.5
Eucgr.D02502 Eucalyptus grandis HOM05D006988 ORTHO05D008731 6.1e-54 214.9 159 66.0
MSTRG.20719 Avicennia marina HOM05D006988 ORTHO05D008731 1.8e-53 213.4 157 66.2
vmacro13459 Vaccinium macrocarpon HOM05D006988 ORTHO05D008731 4.5e-49 198.7 160 64.4
Psat3g157120 Pisum sativum HOM05D006988 ORTHO05D008731 1.3e-43 180.6 151 60.9
Thhalv10028565m.g Eutrema salsugineum HOM05D000447 ORTHO05D000315 1.0e-40 171.0 129 63.6
SMO367G0117 Selaginella moellendorffii HOM05D012767 ORTHO05D008731 1.1e-39 167.5 185 47.6
C03p91270 Brassica napus HOM05D006988 ORTHO05D008731 1.4e-37 160.6 123 62.6
AagrBONN_evm.TU.Sc2ySwM_362.1347 Anthoceros agrestis HOM05D006988 ORTHO05D008731 8.9e-37 157.9 123 63.4
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 1.2e-36 157.5 174 47.1
BcaC03g13893 Brassica carinata HOM05D006988 ORTHO05D008731 5.7e-36 155.2 215 43.3
PRCOL_00005443 Prasinoderma coloniale HOM05D006988 ORTHO05D008731 4.1e-34 149.1 234 38.0
BolC2t07167H Brassica oleracea HOM05D006988 ORTHO05D008731 3.9e-32 142.5 83 75.9
C02p10970 Brassica napus HOM05D006988 ORTHO05D008731 1.5e-31 140.6 83 74.7
BcaC01g03084 Brassica carinata HOM05D006988 ORTHO05D008731 4.4e-28 129.0 170 39.4
MCO12G266 Micromonas commoda HOM05D006988 ORTHO05D008731 3.9e-24 115.9 177 39.5
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 1.5e-23 114.0 92 60.9
Lalb_Chr19g0127481 Lupinus albus HOM05D006988 ORTHO05D008731 7.3e-23 111.7 55 85.5
unitig_26.g9723 Utricularia gibba HOM05D000502 ORTHO05D000356 1.1e-21 107.8 101 54.5
Actinidia12175 Actinidia chinensis HOM05D006988 ORTHO05D008731 1.0e-16 91.3 82 54.9
A09p00790 Brassica napus HOM05D006988 ORTHO05D008731 5.1e-16 89.0 96 50.0
BolC3t17906H Brassica oleracea HOM05D001199 ORTHO05D001013 8.9e-13 78.2 76 47.4
Dinv13821 Davidia involucrata HOM05D006988 ORTHO05D008731 7.6e-12 75.1 70 52.9
C03p56160 Brassica napus HOM05D001199 ORTHO05D001013 2.2e-11 73.6 78 46.2
Actinidia22773 Actinidia chinensis HOM05D006988 ORTHO05D008731 4.1e-10 69.3 34 88.2
Lalb_Chr19g0127491 Lupinus albus HOM05D006988 ORTHO05D008731 3.0e-08 63.2 83 43.4
RcHm_v2.0_Chr1g0348661 Rosa chinensis HOM05D006988 ORTHO05D008731 1.1e-07 61.2 33 81.8
Haze_25195 Corylus avellana HOM05D005663 ORTHO05D007258 9.6e-07 58.2 189 25.9
GSVIVG01026586001 Vitis vinifera HOM05D005663 ORTHO05D007258 9.6e-07 58.2 192 25.5
Haze_25187 Corylus avellana HOM05D005663 ORTHO05D007258 4.7e-06 55.8 172 25.6


User provided reference genes

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