Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1339 Trochodendron aralioides HOM05D000476 ORTHO05D415040 1.3e-63 246.1 117 100.0
TAR381G1494 Trochodendron aralioides HOM05D000476 ORTHO05D005719 1.5e-11 73.2 48 79.2
TAR381G1633 Trochodendron aralioides HOM05D000476 ORTHO05D005719 1.5e-11 73.2 48 79.2
FvH4_2g15580 Fragaria vesca HOM05D000476 ORTHO05D005719 5.4e-09 64.7 46 65.2
FAN20G0044 Fragaria x ananassa HOM05D000476 ORTHO05D005719 5.4e-09 64.7 46 65.2
FAN24G1070 Fragaria x ananassa HOM05D000476 ORTHO05D005719 5.4e-09 64.7 46 65.2
FAN15G2981 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.6e-08 63.2 46 63.0
FAN27G1175 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.6e-08 63.2 46 63.0
GSVIVG01023992001 Vitis vinifera HOM05D000476 ORTHO05D005719 2.7e-08 62.4 48 64.6
QL11p051500 Quercus lobata HOM05D000476 ORTHO05D005719 4.6e-08 61.6 46 58.7
RcHm_v2.0_Chr6g0278761 Rosa chinensis HOM05D000476 ORTHO05D005719 7.8e-08 60.8 46 60.9
Nn6g31926 Nelumbo nucifera HOM05D000476 ORTHO05D005719 1.0e-07 60.5 48 62.5
Actinidia20522 Actinidia chinensis HOM05D000476 ORTHO05D005719 1.7e-07 59.7 48 60.4
Cpa.g.sc20.106 Carica papaya HOM05D000476 ORTHO05D005719 1.7e-07 59.7 46 63.0
Dinv40142 Davidia involucrata HOM05D000476 ORTHO05D005719 3.0e-07 58.9 48 62.5
PSO170G5898 Papaver somniferum HOM05D000476 ORTHO05D005719 3.0e-07 58.9 48 62.5
PSO210G5945 Papaver somniferum HOM05D000476 ORTHO05D005719 3.0e-07 58.9 48 62.5
Gohir.A01G170100 Gossypium hirsutum HOM05D000476 ORTHO05D005719 6.6e-07 57.8 46 58.7
Gohir.D01G161200 Gossypium hirsutum HOM05D000476 ORTHO05D005719 6.6e-07 57.8 46 58.7
Gorai.002G199800 Gossypium raimondii HOM05D000476 ORTHO05D005719 6.6e-07 57.8 46 58.7
MD10G1127200 Malus domestica HOM05D000476 ORTHO05D005719 8.6e-07 57.4 46 60.9
QL06p051967 Quercus lobata HOM05D000476 ORTHO05D005719 8.6e-07 57.4 48 60.4
ATR0661G123 Amborella trichopoda HOM05D000476 ORTHO05D005719 1.1e-06 57.0 48 60.4
CANSAT01G2246 Cannabis sativa HOM05D000476 ORTHO05D005719 1.5e-06 56.6 46 65.2
COL.COLO4_17370 Corchorus olitorius HOM05D000476 ORTHO05D005719 1.5e-06 56.6 46 56.5
Thecc.02G056200 Theobroma cacao HOM05D000476 ORTHO05D005719 1.5e-06 56.6 46 56.5
Duzib248G0030 Durio zibethinus HOM05D000476 ORTHO05D005719 1.9e-06 56.2 46 54.3
MBI05_g00176_MAGBIO Magnolia biondii HOM05D000476 ORTHO05D005719 1.9e-06 56.2 48 60.4
Thecc.01G012000 Theobroma cacao HOM05D000476 ORTHO05D005719 2.5e-06 55.8 48 62.5
Actinidia18045 Actinidia chinensis HOM05D000476 ORTHO05D005719 3.3e-06 55.5 48 58.3
CSS0012841 Camellia sinensis var. sinensis HOM05D000476 ORTHO05D005719 3.3e-06 55.5 48 56.2
Haze_03708 Corylus avellana HOM05D000476 ORTHO05D005719 3.3e-06 55.5 48 62.5
Potri.005G108400 Populus trichocarpa HOM05D000476 ORTHO05D005719 3.3e-06 55.5 46 63.0
CDE09G0394 Ceratophyllum demersum HOM05D000476 ORTHO05D005719 4.3e-06 55.1 48 56.2
Hma1.2p1_0561F.1_g178970 Hydrangea macrophylla HOM05D000476 ORTHO05D005719 5.6e-06 54.7 46 58.7
MD05G1124400 Malus domestica HOM05D000476 ORTHO05D005719 7.3e-06 54.3 46 56.5
Potri.004G177200 Populus trichocarpa HOM05D000476 ORTHO05D005719 7.3e-06 54.3 46 58.7
Prupe.8G168100 Prunus persica HOM05D000476 ORTHO05D005719 7.3e-06 54.3 46 56.5
Lj9A397G33 Lonicera japonica HOM05D000476 ORTHO05D005719 9.5e-06 53.9 48 58.3
Lj9C400T3 Lonicera japonica HOM05D000476 ORTHO05D005719 9.5e-06 53.9 48 58.3


User provided reference genes

Program Settings