Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1319 Trochodendron aralioides HOM05D005470 ORTHO05D006855 4.0e-87 324.7 161 100.0
TAR365G0091 Trochodendron aralioides HOM05D005470 ORTHO05D006855 6.6e-66 254.2 161 81.4
TAR365G1033 Trochodendron aralioides HOM05D005470 ORTHO05D006855 6.6e-66 254.2 161 81.4
Nn1g07785 Nelumbo nucifera HOM05D005470 ORTHO05D006855 8.7e-58 227.3 162 75.3
Nn3g19926 Nelumbo nucifera HOM05D005470 ORTHO05D006855 5.3e-55 218.0 161 71.4
Haze_24781 Corylus avellana HOM05D005470 ORTHO05D006855 3.8e-53 211.8 161 67.7
Cfa002558 Carpinus fangiana HOM05D005470 ORTHO05D006855 1.1e-52 210.3 162 67.9
CSS0013378 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 3.2e-52 208.8 161 67.7
CiPaw.04G106400 Carya illinoinensis HOM05D005470 ORTHO05D006855 3.2e-52 208.8 161 68.3
Hma1.2p1_1061F.1_g253380 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 3.2e-52 208.8 161 68.3
Prupe.8G204600 Prunus persica HOM05D005470 ORTHO05D006855 1.2e-51 206.8 161 64.0
QL03p049466 Quercus lobata HOM05D005470 ORTHO05D006855 1.6e-51 206.5 159 66.0
Potri.002G240800 Populus trichocarpa HOM05D005470 ORTHO05D006855 6.0e-51 204.5 160 65.6
Manes.12G042650 Manihot esculenta HOM05D005470 ORTHO05D006855 7.9e-51 204.1 160 66.9
Aqoxy2G03764 Aquilegia oxysepala HOM05D005470 ORTHO05D006855 3.9e-50 201.8 154 70.1
FvH4_2g19300 Fragaria vesca HOM05D005470 ORTHO05D006855 3.9e-50 201.8 161 64.6
FAN24G1307 Fragaria x ananassa HOM05D005470 ORTHO05D006855 5.1e-50 201.4 161 64.0
Cc01_g17220 Coffea canephora HOM05D005470 ORTHO05D006855 1.5e-49 199.9 161 63.4
MD10G1166100 Malus domestica HOM05D005470 ORTHO05D006855 7.4e-49 197.6 162 60.5
Sabra02G0183400 Salix brachista HOM05D005470 ORTHO05D006855 9.6e-49 197.2 160 62.5
RcHm_v2.0_Chr6g0285101 Rosa chinensis HOM05D005470 ORTHO05D006855 1.3e-48 196.8 161 63.4
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 1.6e-48 196.4 159 64.8
Atru.chr5.1498 Acer truncatum HOM05D005470 ORTHO05D006855 2.8e-48 195.7 158 64.6
Lj2A1133T34 Lonicera japonica HOM05D005470 ORTHO05D006855 2.8e-48 195.7 162 63.0
AUR62031834 Chenopodium quinoa HOM05D005470 ORTHO05D006855 4.8e-48 194.9 161 62.1
vmacro02749 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 4.8e-48 194.9 162 63.0
PSO478G2025 Papaver somniferum HOM05D005470 ORTHO05D006855 4.0e-47 191.8 163 65.6
Duzib211G0062 Durio zibethinus HOM05D005470 ORTHO05D006855 5.3e-47 191.4 161 64.0
Dinv04663 Davidia involucrata HOM05D005470 ORTHO05D006855 6.9e-47 191.0 147 66.7
Nitab4.5_0000866g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 1.2e-46 190.3 161 62.1
Hund18358 Selenicereus undatus HOM05D005470 ORTHO05D006855 1.2e-46 190.3 163 63.2
Lsat_1_v5_gn_8_90101 Lactuca sativa HOM05D005470 ORTHO05D006855 1.5e-46 189.9 164 62.8
CANSAT56G1556 Cannabis sativa HOM05D005470 ORTHO05D006855 2.0e-46 189.5 163 60.1
Nitab4.5_0000866g0080 Nicotiana tabacum HOM05D005470 ORTHO05D006855 2.6e-46 189.1 161 62.1
EL10Ac7g17787 Beta vulgaris HOM05D005470 ORTHO05D006855 3.4e-46 188.7 158 60.1
Hma1.2p1_1061F.1_g253390 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 3.4e-46 188.7 154 65.6
MSTRG.21429 Avicennia marina HOM05D005470 ORTHO05D006855 4.5e-46 188.3 162 60.5
Lalb_Chr19g0125551 Lupinus albus HOM05D005470 ORTHO05D006855 4.5e-46 188.3 158 59.5
Cpa.g.sc8.172 Carica papaya HOM05D005470 ORTHO05D006855 5.8e-46 188.0 160 60.0
Nitab4.5_0003790g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 7.6e-46 187.6 161 61.5
TWI75G1873 Tripterygium wilfordii HOM05D005470 ORTHO05D006855 7.6e-46 187.6 161 59.6
arahy.Tifrunner.gnm1.ann1.KE0QUS Arachis hypogaea HOM05D005470 ORTHO05D006855 9.9e-46 187.2 161 58.4
Solyc09g061680.3 Solanum lycopersicum HOM05D005470 ORTHO05D006855 9.9e-46 187.2 161 62.1
arahy.Tifrunner.gnm1.ann1.07T9WF Arachis hypogaea HOM05D005470 ORTHO05D006855 1.3e-45 186.8 164 57.3
Gohir.D07G162300 Gossypium hirsutum HOM05D005470 ORTHO05D006855 1.3e-45 186.8 161 61.5
Gorai.001G185900 Gossypium raimondii HOM05D005470 ORTHO05D006855 1.3e-45 186.8 161 61.5
PGSC0003DMG400002375 Solanum tuberosum HOM05D005470 ORTHO05D006855 1.3e-45 186.8 161 60.9
PSO017G3643 Papaver somniferum HOM05D005470 ORTHO05D006855 2.2e-45 186.0 163 64.4
Thecc.01G227800 Theobroma cacao HOM05D005470 ORTHO05D006855 3.8e-45 185.3 161 61.5
Sopen09g024670 Solanum pennellii HOM05D005470 ORTHO05D006855 4.9e-45 184.9 161 61.5
Ah.08g214020 Amaranthus hybridus HOM05D005470 ORTHO05D006855 6.4e-45 184.5 161 59.6
ClCG07G001860 Citrullus lanatus HOM05D005470 ORTHO05D006855 6.4e-45 184.5 159 59.1
arahy.Tifrunner.gnm1.ann1.4GE7F8 Arachis hypogaea HOM05D005470 ORTHO05D006855 8.4e-45 184.1 161 57.8
Gohir.A07G156000 Gossypium hirsutum HOM05D005470 ORTHO05D006855 1.4e-44 183.3 161 60.9
DCAR_018553 Daucus carota HOM05D005470 ORTHO05D006855 4.2e-44 181.8 147 63.9
Oeu015466.1 Olea europaea HOM05D005470 ORTHO05D006855 9.3e-44 180.6 161 60.2
GSVIVG01028578001 Vitis vinifera HOM05D005470 ORTHO05D006855 1.2e-43 180.3 108 80.6
AT5G48840 Arabidopsis thaliana HOM05D005470 ORTHO05D006855 2.1e-43 179.5 160 58.8
Aa31sc866G40 Aethionema arabicum HOM05D005470 ORTHO05D006855 2.7e-43 179.1 160 56.2
PGR083G1301 Punica granatum HOM05D005470 ORTHO05D006855 2.7e-43 179.1 161 55.9
Medtr7g058920 Medicago truncatula HOM05D005470 ORTHO05D006855 6.0e-43 177.9 161 58.4
AL8G22020 Arabidopsis lyrata HOM05D005470 ORTHO05D006855 1.0e-42 177.2 157 57.3
THA.LOC104802678 Tarenaya hassleriana HOM05D005470 ORTHO05D006855 3.0e-42 175.6 164 56.1
VMungo0516G0001 Vigna mungo HOM05D005470 ORTHO05D006855 3.0e-42 175.6 161 55.3
Phvul.007G209400 Phaseolus vulgaris HOM05D005470 ORTHO05D006855 3.9e-42 175.3 161 55.9
Sc17g0002580 Simmondsia chinensis HOM05D005470 ORTHO05D006855 3.9e-42 175.3 161 57.8
HanXRQChr04g0110691 Helianthus annuus HOM05D005470 ORTHO05D006855 5.1e-42 174.9 161 59.0
Actinidia37584 Actinidia chinensis HOM05D005470 ORTHO05D006855 6.7e-42 174.5 162 58.0
Migut.I00044 Erythranthe guttata HOM05D005470 ORTHO05D006855 6.7e-42 174.5 161 59.0
Atru.chr5.2014 Acer truncatum HOM05D005470 ORTHO05D006855 8.7e-42 174.1 158 59.5
Ca_07533_v3 Cicer arietinum L. HOM05D005470 ORTHO05D006855 8.7e-42 174.1 159 59.1
TPR.G15281 Trifolium pratense HOM05D005470 ORTHO05D006855 1.1e-41 173.7 161 56.5
Migut.D00523 Erythranthe guttata HOM05D005470 ORTHO05D006855 2.5e-41 172.6 163 57.7
Psat3g144240 Pisum sativum HOM05D005470 ORTHO05D006855 3.3e-41 172.2 161 53.4
BcaC06g30729 Brassica carinata HOM05D005470 ORTHO05D006855 4.3e-41 171.8 164 55.5
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 7.4e-41 171.0 161 59.0
Lj1g0018515 Lotus japonicus HOM05D005470 ORTHO05D006855 1.3e-40 170.2 157 54.8
SHI28627 Sapria himalayana HOM05D005470 ORTHO05D006855 1.3e-40 170.2 158 58.2
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 2.8e-40 169.1 163 55.2
BraA06t26801Z Brassica rapa HOM05D005470 ORTHO05D006855 3.7e-40 168.7 163 55.2
MELO3C026704.2 Cucumis melo HOM05D005470 ORTHO05D006855 4.8e-40 168.3 163 56.4
BcaC06g30753 Brassica carinata HOM05D005470 ORTHO05D006855 6.2e-40 167.9 163 53.4
Eucgr.H00804 Eucalyptus grandis HOM05D005470 ORTHO05D006855 6.2e-40 167.9 158 55.7
CAN.G1273.33 Capsicum annuum HOM05D005470 ORTHO05D006855 8.2e-40 167.5 163 58.9
CsaV3_3G028840 Cucumis sativus L. HOM05D005470 ORTHO05D006855 8.2e-40 167.5 163 55.8
Thhalv10004618m.g Eutrema salsugineum HOM05D005470 ORTHO05D006855 1.1e-39 167.2 164 53.0
BolC7t44465H Brassica oleracea HOM05D005470 ORTHO05D006855 1.8e-39 166.4 163 52.8
Ciclev10021316m.g Citrus clementina HOM05D005470 ORTHO05D006855 1.8e-39 166.4 147 60.5
C07p39460 Brassica napus HOM05D005470 ORTHO05D006855 2.4e-39 166.0 163 54.6
Sed0016487 Sechium edule HOM05D005470 ORTHO05D006855 4.0e-39 165.2 159 55.3
Carub.0008s0857 Capsella rubella HOM05D005470 ORTHO05D006855 1.2e-38 163.7 158 54.4
Glyma.18G172500 Glycine max HOM05D005470 ORTHO05D006855 1.5e-38 163.3 156 54.5
Sp2g19240 Schrenkiella parvula HOM05D005470 ORTHO05D006855 2.0e-38 162.9 164 53.0
unitig_92.g28106 Utricularia gibba HOM05D005470 ORTHO05D006855 2.0e-38 162.9 107 73.8
CARHR182880 Cardamine hirsuta HOM05D005470 ORTHO05D006855 5.8e-38 161.4 157 53.5
CsaV3_6G036910 Cucumis sativus L. HOM05D005470 ORTHO05D006855 5.8e-38 161.4 162 56.8
CDE01G0096 Ceratophyllum demersum HOM05D005470 ORTHO05D006855 3.8e-37 158.7 168 54.8
Peaxi162Scf00107g01116 Petunia axillaris HOM05D005470 ORTHO05D006855 9.3e-36 154.1 157 53.5
ATR0736G181 Amborella trichopoda HOM05D005470 ORTHO05D006855 1.9e-33 146.4 162 47.5
Os03g0851800 Oryza sativa ssp. japonica HOM05D005470 ORTHO05D006855 1.5e-30 136.7 165 50.9
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.4e-30 135.6 126 59.5
HPP92_021568 Vanilla planifolia HOM05D005470 ORTHO05D006855 2.2e-29 132.9 157 49.7
SEGI_26814 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 1.1e-28 130.6 156 48.1
SEGI_32261 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 5.5e-28 128.3 156 46.8
Mapoly0006s0023 Marchantia polymorpha HOM05D005470 ORTHO05D006855 2.7e-27 125.9 155 45.8
Zm00001eb064670 Zea mays HOM05D005470 ORTHO05D006855 4.6e-27 125.2 163 45.4
CBR_g41676 Chara braunii HOM05D005470 ORTHO05D006855 9.7e-25 117.5 185 38.9
Pp3c24_12730 Physcomitrium patens HOM05D005470 ORTHO05D006855 2.8e-24 115.9 154 42.2
AUR62008875 Chenopodium quinoa HOM05D005470 ORTHO05D006855 3.7e-24 115.5 80 67.5
SMO144G0038 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 3.7e-24 115.5 154 43.5
SMO351G0371 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 4.1e-23 112.1 110 53.6
HanXRQChr16g0514371 Helianthus annuus HOM05D005470 ORTHO05D006855 2.5e-20 102.8 127 47.2
MCO10G244 Micromonas commoda HOM05D005470 ORTHO05D006855 3.2e-20 102.4 97 54.6
MD05G1178000 Malus domestica HOM05D005470 ORTHO05D006855 3.0e-18 95.9 67 67.2
CAN.G122.7 Capsicum annuum HOM05D005470 ORTHO05D006855 3.3e-17 92.4 117 47.9
CANSAT54G2179 Cannabis sativa HOM05D005470 ORTHO05D006855 2.4e-15 86.3 127 44.1
Cre02.g090150 Chlamydomonas reinhardtii HOM05D005470 ORTHO05D006855 5.3e-15 85.1 111 39.6
CSS0038259 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 6.9e-15 84.7 84 54.8
Cfa025604 Carpinus fangiana HOM05D005470 ORTHO05D006855 5.5e-12 75.1 81 42.0
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 1.6e-11 73.6 74 43.2
vmacro23327 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 3.1e-07 59.3 41 68.3
vmacro15781 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 4.1e-07 58.9 41 65.9
vmacro15783 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 4.1e-07 58.9 41 68.3
Glyma.08G355700 Glycine max HOM05D005470 ORTHO05D006855 1.2e-06 57.4 44 61.4


User provided reference genes

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