Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1289 Trochodendron aralioides HOM05D005115 ORTHO05D005703 2.0e-49 199.1 125 100.0
Dinv37526 Davidia involucrata HOM05D005115 ORTHO05D005703 6.2e-11 71.2 90 50.0
Nn3g19002 Nelumbo nucifera HOM05D005115 ORTHO05D005703 3.1e-10 68.9 89 48.3
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.5e-09 66.6 58 65.5
Glyma.01G225300 Glycine max HOM05D005115 ORTHO05D005703 7.5e-09 64.3 81 48.1
Glyma.11G017800 Glycine max HOM05D005115 ORTHO05D005703 9.9e-09 63.9 80 47.5
Sabra03G0101600 Salix brachista HOM05D000906 ORTHO05D000713 1.3e-08 63.5 70 55.7
TAR375G0477 Trochodendron aralioides HOM05D005115 ORTHO05D005703 1.7e-08 63.2 85 50.6
Duzib068G0330 Durio zibethinus HOM05D005115 ORTHO05D005703 2.2e-08 62.8 85 43.5
Gohir.D09G185000 Gossypium hirsutum HOM05D005115 ORTHO05D005703 2.2e-08 62.8 88 44.3
Thecc.03G298900 Theobroma cacao HOM05D005115 ORTHO05D005703 2.9e-08 62.4 102 43.1
CSS0029994 Camellia sinensis var. sinensis HOM05D005115 ORTHO05D005703 6.4e-08 61.2 85 47.1
CSS0045410 Camellia sinensis var. sinensis HOM05D005115 ORTHO05D005703 6.4e-08 61.2 85 47.1
VMungo1215G1874 Vigna mungo HOM05D005115 ORTHO05D005703 8.3e-08 60.8 80 45.0
Cpa.g.sc79.29 Carica papaya HOM05D005115 ORTHO05D005703 3.2e-07 58.9 54 61.1
Gohir.A09G190300 Gossypium hirsutum HOM05D005115 ORTHO05D005703 3.2e-07 58.9 102 40.2
Hma1.2p1_0440F.1_g153350 Hydrangea macrophylla HOM05D005115 ORTHO05D005703 3.2e-07 58.9 107 60.7
LjContig00312_ERROPOS870357g0004531 Lotus japonicus HOM05D005115 ORTHO05D005703 3.2e-07 58.9 89 44.9
Rhsim02G0244500 Rhododendron simsii HOM05D005115 ORTHO05D005703 3.2e-07 58.9 90 43.3
TAR375G0257 Trochodendron aralioides HOM05D005115 ORTHO05D005703 3.2e-07 58.9 85 45.9
Phvul.002G164100 Phaseolus vulgaris HOM05D005115 ORTHO05D005703 4.1e-07 58.5 83 45.8
Actinidia22166 Actinidia chinensis HOM05D005115 ORTHO05D005703 5.4e-07 58.2 87 44.8
Haze_09072 Corylus avellana HOM05D005115 ORTHO05D005703 7.1e-07 57.8 99 42.4
Aqoxy7G00093 Aquilegia oxysepala HOM05D005115 ORTHO05D005703 1.2e-06 57.0 96 42.7
Gorai.006G207500 Gossypium raimondii HOM05D005115 ORTHO05D005703 1.2e-06 57.0 89 40.4
Duzib205G0660 Durio zibethinus HOM05D005115 ORTHO05D005703 1.6e-06 56.6 106 38.7
Duzib084G1297 Durio zibethinus HOM05D005115 ORTHO05D005703 2.1e-06 56.2 98 40.8
Gohir.D11G024900 Gossypium hirsutum HOM05D005115 ORTHO05D005703 2.7e-06 55.8 86 43.0
Gorai.007G026700 Gossypium raimondii HOM05D005115 ORTHO05D005703 2.7e-06 55.8 86 43.0
Gohir.A11G025300 Gossypium hirsutum HOM05D005115 ORTHO05D005703 3.5e-06 55.5 87 44.8
vmacro11350 Vaccinium macrocarpon HOM05D005115 ORTHO05D005703 3.5e-06 55.5 86 45.3
Ca_17482_v3 Cicer arietinum L. HOM05D005115 ORTHO05D005703 4.6e-06 55.1 87 41.4
Ca_17506_v3 Cicer arietinum L. HOM05D005115 ORTHO05D005703 4.6e-06 55.1 87 41.4
Solyc08g008350.3 Solanum lycopersicum HOM05D005115 ORTHO05D005703 4.6e-06 55.1 90 44.4
Actinidia04197 Actinidia chinensis HOM05D000749 ORTHO05D004893 6.0e-06 54.7 92 57.6
Cfa011998 Carpinus fangiana HOM05D005115 ORTHO05D005703 7.8e-06 54.3 85 45.9
Cc08_g16140 Coffea canephora HOM05D005115 ORTHO05D005703 7.8e-06 54.3 59 57.6


User provided reference genes

Program Settings