Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1142 Trochodendron aralioides HOM05D005056 ORTHO05D006487 1.5e-40 169.1 85 100.0
GSVIVG01038137001 Vitis vinifera HOM05D005056 ORTHO05D006487 1.5e-16 89.4 66 65.2
Duzib128G0002 Durio zibethinus HOM05D005056 ORTHO05D006487 2.8e-15 85.1 69 62.3
CiPaw.02G100700 Carya illinoinensis HOM05D005056 ORTHO05D006487 1.8e-14 82.4 68 60.3
Ciclev10019145m.g Citrus clementina HOM05D005056 ORTHO05D006487 6.9e-14 80.5 66 60.6
COL.COLO4_09146 Corchorus olitorius HOM05D005056 ORTHO05D006487 2.6e-13 78.6 77 51.9
PGR142G4138 Punica granatum HOM05D005056 ORTHO05D006487 5.9e-13 77.4 66 56.1
Prupe.1G206800 Prunus persica HOM05D005056 ORTHO05D006487 2.9e-12 75.1 70 61.4
Atru.chr3.3232 Acer truncatum HOM05D005056 ORTHO05D006487 5.0e-12 74.3 69 55.1
Aqoxy5G00514 Aquilegia oxysepala HOM05D005056 ORTHO05D006487 6.5e-12 73.9 67 56.7
CDE04G2996 Ceratophyllum demersum HOM05D005056 ORTHO05D006487 8.5e-12 73.6 67 62.7
Eucgr.H00317 Eucalyptus grandis HOM05D005056 ORTHO05D006487 1.4e-11 72.8 66 51.5
CSS0024905 Camellia sinensis var. sinensis HOM05D005056 ORTHO05D006487 1.9e-11 72.4 68 58.8
CSS0004898 Camellia sinensis var. sinensis HOM05D005056 ORTHO05D006487 2.5e-11 72.0 68 58.8
Rhsim13G0194600 Rhododendron simsii HOM05D005056 ORTHO05D006656 2.5e-11 72.0 69 58.0
MELO3C022426.2 Cucumis melo HOM05D005056 ORTHO05D006487 7.2e-11 70.5 68 52.9
CsaV3_6G007040 Cucumis sativus L. HOM05D005056 ORTHO05D006487 9.4e-11 70.1 68 52.9
Hma1.2p1_0150F.1_g066780 Hydrangea macrophylla HOM05D005056 ORTHO05D006487 1.2e-10 69.7 71 59.2
Potri.013G125800 Populus trichocarpa HOM05D005056 ORTHO05D006487 1.2e-10 69.7 70 52.9
Hund06242 Selenicereus undatus HOM05D005056 ORTHO05D006487 1.2e-10 69.7 69 53.6
ClCG06G001090 Citrullus lanatus HOM05D005056 ORTHO05D006487 2.7e-10 68.6 68 51.5
vmacro03868 Vaccinium macrocarpon HOM05D005056 ORTHO05D006487 2.7e-10 68.6 69 55.1
CARHR138830 Cardamine hirsuta HOM05D005056 ORTHO05D006487 3.6e-10 68.2 68 57.4
PSO302G0034 Papaver somniferum HOM05D005056 ORTHO05D006487 6.1e-10 67.4 75 53.3
Sc08g0000580 Simmondsia chinensis HOM05D005056 ORTHO05D006487 7.9e-10 67.0 68 50.0
Thecc.05G215400 Theobroma cacao HOM05D005056 ORTHO05D006487 1.4e-09 66.2 55 61.8
Carub.0004s2618 Capsella rubella HOM05D005056 ORTHO05D006487 1.8e-09 65.9 68 55.9
Dinv04468 Davidia involucrata HOM05D005056 ORTHO05D006487 1.8e-09 65.9 38 78.9
Lsat_1_v5_gn_2_46281 Lactuca sativa HOM05D005056 ORTHO05D006487 1.8e-09 65.9 66 51.5
Lj7A489G23 Lonicera japonica HOM05D005056 ORTHO05D006487 1.8e-09 65.9 68 57.4
PSO170G2549 Papaver somniferum HOM05D005056 ORTHO05D006487 1.8e-09 65.9 74 52.7
HPP92_014516 Vanilla planifolia HOM05D005056 ORTHO05D006487 2.3e-09 65.5 68 52.9
Lj1g0023120 Lotus japonicus HOM05D005056 ORTHO05D006487 6.7e-09 63.9 65 55.4
Sed0010490 Sechium edule HOM05D005056 ORTHO05D006487 6.7e-09 63.9 68 50.0
Gohir.D04G162100 Gossypium hirsutum HOM05D005056 ORTHO05D006487 8.8e-09 63.5 68 52.9
A03p24390 Brassica napus HOM05D005056 ORTHO05D006487 1.9e-08 62.4 69 55.1
BraA03t11648Z Brassica rapa HOM05D005056 ORTHO05D006487 1.9e-08 62.4 69 55.1
RcHm_v2.0_Chr7g0219421 Rosa chinensis HOM05D005056 ORTHO05D006487 1.9e-08 62.4 71 53.5
BcaC01g05222 Brassica carinata HOM05D005056 ORTHO05D006487 3.3e-08 61.6 69 55.1
C03p29070 Brassica napus HOM05D005056 ORTHO05D006487 3.3e-08 61.6 69 55.1
BolC3t15261H Brassica oleracea HOM05D000026 ORTHO05D000094 3.3e-08 61.6 69 55.1
SGA_v2.0_scaffold289G47281 Striga asiatica HOM05D005056 ORTHO05D006487 3.3e-08 61.6 65 52.3
Phvul.003G296300 Phaseolus vulgaris HOM05D005056 ORTHO05D006487 4.3e-08 61.2 72 48.6
BcaB01g03369 Brassica carinata HOM05D005056 ORTHO05D006487 7.4e-08 60.5 67 55.2
CANSAT56G3616 Cannabis sativa HOM05D005056 ORTHO05D006487 9.7e-08 60.1 65 50.8
Migut.N03070 Erythranthe guttata HOM05D005056 ORTHO05D006487 9.7e-08 60.1 68 52.9
MD17G1177700 Malus domestica HOM05D005056 ORTHO05D006487 2.2e-07 58.9 40 70.0
QL93p1902_0036 Quercus lobata HOM05D005056 ORTHO05D006487 2.2e-07 58.9 68 54.4
Psat7g121360 Pisum sativum HOM05D005056 ORTHO05D006487 2.8e-07 58.5 68 50.0
TWI38G0332 Tripterygium wilfordii HOM05D005056 ORTHO05D006487 2.8e-07 58.5 41 61.0
VMungo0251G2998 Vigna mungo HOM05D005056 ORTHO05D006487 2.8e-07 58.5 68 50.0
arahy.Tifrunner.gnm1.ann1.K7ZH1T Arachis hypogaea HOM05D005056 ORTHO05D006487 4.8e-07 57.8 63 55.6
QL10p054991 Quercus lobata HOM05D005056 ORTHO05D006487 6.3e-07 57.4 68 52.9
TPR.G23553 Trifolium pratense HOM05D005056 ORTHO05D006487 6.3e-07 57.4 68 51.5
Cc03_g13950 Coffea canephora HOM05D005056 ORTHO05D006487 8.2e-07 57.0 38 68.4
Glyma.07G208300 Glycine max HOM05D005056 ORTHO05D006487 1.8e-06 55.8 62 51.6
Lalb_Chr16g0384481 Lupinus albus HOM05D005056 ORTHO05D006487 1.8e-06 55.8 66 50.0
arahy.Tifrunner.gnm1.ann1.X1H480 Arachis hypogaea HOM05D005056 ORTHO05D006487 2.4e-06 55.5 63 54.0
Glyma.02G137100 Glycine max HOM05D005056 ORTHO05D006487 3.1e-06 55.1 70 50.0
Medtr4g087270 Medicago truncatula HOM05D005056 ORTHO05D006487 3.1e-06 55.1 64 46.9
SalBow1G2014 Salvia bowleyana HOM05D005056 ORTHO05D006487 3.1e-06 55.1 66 47.0
Oeu018048.1 Olea europaea HOM05D005056 ORTHO05D006487 6.9e-06 53.9 68 50.0


User provided reference genes

Program Settings