Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 4.1e-59 231.1 109 100.0
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.9e-48 195.7 109 79.8
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.5e-48 195.3 104 81.7
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.8e-46 189.1 107 75.7
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 3.7e-44 181.4 104 74.0
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 1.8e-43 179.1 105 70.5
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.3e-43 177.6 104 75.0
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 4.5e-42 174.5 104 72.1
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.7e-41 172.6 103 68.9
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.7e-41 172.6 103 67.0
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 3.8e-41 171.4 105 67.6
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.5e-41 170.6 105 68.6
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 8.5e-41 170.2 103 67.0
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.5e-40 169.5 104 69.2
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 1.5e-40 169.5 105 66.7
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 2.5e-40 168.7 105 67.6
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 7.2e-40 167.2 105 66.7
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.2e-40 167.2 103 65.0
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.2e-40 167.2 103 65.0
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 9.4e-40 166.8 103 66.0
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.2e-39 166.4 85 84.7
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.2e-39 166.4 105 66.7
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.6e-39 166.0 103 64.1
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.6e-39 166.0 103 64.1
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.6e-39 166.0 105 64.8
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.6e-39 164.9 109 67.9
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 3.6e-39 164.9 102 68.6
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 6.1e-39 164.1 105 65.7
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 6.1e-39 164.1 105 62.9
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.0e-38 163.3 90 76.7
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.0e-38 163.3 106 65.1
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 6.7e-38 160.6 102 65.7
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 8.8e-38 160.2 102 65.7
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 1.5e-37 159.5 101 66.3
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.5e-37 159.5 101 65.3
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 2.0e-37 159.1 100 68.0
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 2.0e-37 159.1 100 68.0
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.0e-37 159.1 104 65.4
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.3e-37 158.3 103 67.0
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 5.7e-37 157.5 103 60.2
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 5.7e-37 157.5 103 65.0
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 7.5e-37 157.1 103 60.2
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 3.7e-36 154.8 102 62.7
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 3.7e-36 154.8 106 60.4
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 6.3e-36 154.1 101 64.4
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 8.2e-36 153.7 103 62.1
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 3.1e-35 151.8 96 64.6
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 3.1e-35 151.8 103 61.2
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.7e-34 148.7 87 73.6
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 5.9e-34 147.5 92 67.4
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 5.9e-34 147.5 102 62.7
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 7.7e-34 147.1 83 72.3
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 5.0e-33 144.4 102 54.9
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 6.5e-33 144.1 103 61.2
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 8.5e-33 143.7 100 57.0
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.1e-32 143.3 105 59.0
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 2.5e-32 142.1 100 56.0
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 2.5e-32 142.1 100 56.0
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 7.2e-32 140.6 105 55.2
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 3.6e-31 138.3 98 63.3
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 6.1e-31 137.5 100 56.0
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 6.1e-31 137.5 102 54.9
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.0e-30 136.7 102 54.9
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.0e-30 136.7 77 72.7
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.0e-30 136.7 109 56.9
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 1.4e-30 136.3 100 54.0
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.8e-30 136.0 99 54.5
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.8e-30 136.0 102 54.9
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 2.3e-30 135.6 99 54.5
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 2.3e-30 135.6 90 61.1
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 3.0e-30 135.2 100 55.0
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 5.2e-30 134.4 108 60.2
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 5.2e-30 134.4 100 55.0
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 5.2e-30 134.4 100 55.0
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 2.0e-29 132.5 102 56.9
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 2.0e-29 132.5 101 53.5
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 2.6e-29 132.1 91 59.3
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 3.4e-29 131.7 62 80.6
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 5.7e-29 131.0 122 50.8
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 7.5e-29 130.6 102 55.9
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 1.3e-28 129.8 102 52.9
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 3.7e-28 128.3 102 50.0
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 4.8e-28 127.9 102 50.0
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 6.3e-28 127.5 104 57.7
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 6.3e-28 127.5 95 58.9
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 8.3e-28 127.1 100 52.0
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 1.1e-27 126.7 101 52.5
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 1.8e-27 125.9 102 52.9
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 2.4e-27 125.6 111 55.0
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 7.0e-27 124.0 102 59.8
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 7.0e-27 124.0 102 52.0
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 9.1e-27 123.6 102 51.0
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 9.1e-27 123.6 102 51.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.2e-26 123.2 102 52.9
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-25 119.8 107 47.7
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.3e-25 119.8 107 47.7
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 2.3e-25 119.0 91 54.9
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.5e-24 116.3 88 56.8
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 7.2e-24 114.0 88 55.7
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 2.8e-23 112.1 100 48.0
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 8.0e-23 110.5 64 70.3
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 1.0e-22 110.2 65 63.1
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.7e-20 102.8 90 48.9
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 2.8e-20 102.1 107 43.0
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 3.7e-20 101.7 91 51.6
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.4e-19 99.0 107 43.0
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 4.5e-18 94.7 111 41.4
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 3.0e-14 82.0 44 68.2
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 3.4e-13 78.6 98 38.8
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 8.3e-12 73.9 100 38.0
MBI04_g46496_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 3.3e-08 62.0 45 66.7
Nn8g39378 Nelumbo nucifera HOM05D007077 ORTHO05D008853 2.1e-07 59.3 45 64.4
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 2.8e-07 58.9 50 48.0
Actinidia26406 Actinidia chinensis HOM05D007077 ORTHO05D008853 5.2e-06 54.7 64 48.4


User provided reference genes

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