Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 5.7e-184 647.5 344 100.0
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 5.7e-184 647.5 344 100.0
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 5.2e-161 571.2 346 87.0
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 3.4e-160 568.5 346 86.7
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 4.4e-160 568.2 345 83.8
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 4.4e-160 568.2 345 84.1
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 6.4e-159 564.3 338 84.3
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 4.1e-158 561.6 344 83.4
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 9.2e-158 560.5 349 84.2
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 1.2e-157 560.1 345 83.8
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 7.8e-157 557.4 345 82.9
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 1.0e-156 557.0 346 82.7
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 2.3e-156 555.8 345 82.3
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 2.3e-156 555.8 348 83.9
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 5.1e-156 554.7 345 82.0
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 5.1e-156 554.7 346 82.9
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 6.6e-156 554.3 345 82.0
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 7.3e-155 550.8 345 82.0
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 9.6e-155 550.4 342 82.2
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 1.2e-154 550.1 345 81.4
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 2.8e-154 548.9 345 81.7
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 5.2e-153 544.7 347 82.4
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 5.2e-153 544.7 345 81.2
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 1.2e-152 543.5 345 80.9
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.5e-152 543.1 345 80.9
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 2.0e-152 542.7 344 81.1
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 3.4e-152 542.0 345 82.0
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 1.7e-151 539.7 344 79.9
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 2.2e-151 539.3 345 80.6
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 2.9e-151 538.9 345 80.9
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 3.8e-151 538.5 342 80.4
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 3.8e-151 538.5 345 80.6
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 6.4e-151 537.7 344 79.1
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 8.4e-151 537.3 345 80.9
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 1.1e-150 537.0 345 81.2
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 4.2e-150 535.0 345 81.2
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 7.1e-150 534.3 345 80.3
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 2.1e-149 532.7 343 78.7
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 2.7e-149 532.3 343 78.7
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 4.6e-149 531.6 343 79.0
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 6.0e-149 531.2 343 79.0
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 1.0e-148 530.4 346 80.1
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.3e-148 530.0 345 78.8
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 1.7e-148 529.6 343 78.4
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 2.3e-148 529.3 343 78.7
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 3.9e-148 528.5 345 78.8
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 3.9e-148 528.5 343 78.4
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 1.9e-147 526.2 343 78.7
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 4.3e-147 525.0 343 77.6
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 1.3e-146 523.5 345 79.1
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 1.3e-146 523.5 345 78.8
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 1.3e-146 523.5 345 78.8
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 1.3e-146 523.5 392 71.4
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 1.6e-146 523.1 343 77.6
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 2.8e-146 522.3 343 77.3
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 2.8e-146 522.3 343 77.3
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 4.8e-146 521.5 343 77.8
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 8.1e-146 520.8 343 77.0
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 8.1e-146 520.8 343 77.0
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 8.1e-146 520.8 343 77.0
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 1.1e-145 520.4 355 76.1
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 1.2e-144 516.9 343 76.7
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 1.2e-144 516.9 343 76.4
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 1.5e-144 516.5 340 80.0
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 7.6e-144 514.2 367 74.9
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 1.3e-143 513.5 337 76.6
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 2.9e-143 512.3 340 79.7
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.1e-142 510.4 345 78.3
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 1.1e-142 510.4 325 79.7
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 1.4e-142 510.0 345 77.7
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 9.3e-142 507.3 355 74.1
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 1.2e-141 506.9 345 75.7
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 1.6e-141 506.5 337 79.2
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 1.6e-141 506.5 343 76.7
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 1.6e-141 506.5 345 76.5
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 2.7e-141 505.8 345 75.7
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 6.0e-141 504.6 346 76.3
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 1.3e-140 503.4 344 74.7
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 8.7e-140 500.7 347 76.1
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 1.5e-139 500.0 345 75.9
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 1.9e-139 499.6 351 75.8
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 1.9e-139 499.6 345 76.8
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 1.9e-139 499.6 415 66.5
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 2.5e-139 499.2 345 78.6
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 9.6e-139 497.3 336 74.1
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 2.8e-138 495.7 347 75.8
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 1.1e-137 493.8 343 75.8
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 9.0e-137 490.7 336 77.7
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 1.3e-135 486.9 358 72.9
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.5e-131 473.4 313 79.6
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 4.3e-131 471.9 308 80.2
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 7.4e-131 471.1 308 77.6
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 4.8e-130 468.4 344 70.3
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 8.1e-130 467.6 336 71.1
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 2.0e-128 463.0 272 86.0
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 7.9e-125 451.1 308 76.0
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 1.3e-124 450.3 295 81.4
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 2.3e-124 449.5 400 63.2
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 4.8e-122 441.8 272 81.2
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 8.2e-122 441.0 345 70.1
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 1.5e-120 436.8 345 69.6
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 4.5e-120 435.3 343 68.2
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 6.7e-116 421.4 418 58.6
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 2.5e-115 419.5 292 76.7
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 4.8e-114 415.2 328 69.8
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.2e-112 410.6 345 66.1
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 3.4e-112 409.1 345 65.8
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 1.5e-104 383.6 343 62.4
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 2.9e-103 379.4 222 84.2
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 1.4e-102 377.1 222 83.8
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 1.6e-101 373.6 384 54.2
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.6e-96 357.1 345 60.6
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 4.5e-96 355.5 248 75.4
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 8.2e-90 334.7 204 82.4
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 4.1e-89 332.4 435 49.4
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.5e-83 313.9 344 54.1
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 2.0e-83 313.5 335 50.7
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 8.3e-82 308.1 248 64.1
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 2.2e-79 300.1 249 66.3
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 2.8e-74 283.1 200 73.5
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 1.1e-73 281.2 169 82.8
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 4.0e-68 262.7 274 49.3
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 2.4e-65 253.4 255 56.9
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 6.0e-56 222.2 144 75.0
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 3.0e-55 219.9 144 77.1
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 3.3e-54 216.5 238 54.6
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 1.1e-52 211.5 165 71.5
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 3.4e-51 206.5 194 56.2
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 1.1e-49 201.4 351 37.6
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 4.7e-45 186.0 131 73.3
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 3.4e-43 179.9 110 83.6
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 7.6e-43 178.7 184 57.6
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 3.5e-40 169.9 317 36.6
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 7.8e-40 168.7 323 34.1
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 5.1e-39 166.0 334 33.8
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 4.0e-36 156.4 124 71.8
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 7.3e-30 135.6 113 63.7
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 1.1e-28 131.7 74 86.5
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 9.3e-25 118.6 95 68.4
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 1.1e-22 111.7 106 63.2
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 4.0e-20 103.2 73 65.8
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 5.3e-20 102.8 95 63.2
MD01G1007700 Malus domestica HOM05D005314 ORTHO05D246798 9.6e-06 55.5 31 83.9


User provided reference genes

Program Settings