Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.3e-221 771.9 563 100.0
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 3.4e-125 453.0 522 70.1
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 4.9e-124 449.1 534 73.6
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.8e-118 430.6 393 78.9
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.6e-111 407.5 517 60.2
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 1.4e-110 404.4 519 64.0
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 2.6e-109 400.2 518 64.3
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 7.6e-109 398.7 516 69.6
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 7.6e-109 398.7 519 62.4
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.3e-108 397.9 534 67.8
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 2.9e-108 396.7 540 49.4
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 3.8e-108 396.4 516 63.2
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 8.4e-108 395.2 516 62.8
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 3.9e-105 386.3 518 68.1
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 2.5e-104 383.6 523 62.9
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 2.8e-103 380.2 514 60.7
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 6.2e-103 379.0 539 58.3
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 1.1e-102 378.3 514 58.4
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 2.6e-101 373.6 523 61.4
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 5.8e-101 372.5 515 56.9
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.3e-100 371.3 523 61.8
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 8.4e-100 368.6 517 58.4
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 8.4e-100 368.6 515 49.1
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 5.5e-99 365.9 540 50.7
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 1.6e-98 364.4 515 67.2
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 2.1e-98 364.0 518 57.5
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 4.6e-98 362.8 524 61.8
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 1.8e-97 360.9 517 55.1
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.8e-97 360.9 552 47.5
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 2.3e-97 360.5 517 62.1
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 3.0e-97 360.1 515 62.9
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.9e-97 359.8 537 44.5
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 8.7e-97 358.6 517 60.0
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.1e-96 358.2 517 60.3
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 2.5e-96 357.1 522 67.2
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.6e-95 354.4 555 54.8
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 4.8e-95 352.8 455 58.2
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.8e-94 350.9 539 38.8
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 1.2e-93 348.2 549 54.6
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 4.5e-93 346.3 544 57.9
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 8.4e-92 342.0 534 47.0
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 1.2e-90 338.2 509 44.6
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.3e-89 334.7 531 57.6
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.1e-88 331.6 528 48.3
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 1.5e-88 331.3 514 51.8
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 9.7e-88 328.6 515 55.5
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 1.6e-87 327.8 519 61.3
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.4e-86 324.7 515 54.4
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 3.4e-85 320.1 513 57.7
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 3.4e-85 320.1 547 54.7
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.8e-84 316.6 548 44.9
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 1.4e-83 314.7 516 56.6
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 2.5e-83 313.9 335 63.6
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 7.2e-83 312.4 516 57.4
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 9.4e-83 312.0 549 49.5
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 2.1e-82 310.8 530 54.9
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 3.6e-82 310.1 516 49.8
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 6.1e-82 309.3 517 58.6
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 6.1e-82 309.3 539 54.5
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 3.9e-81 306.6 516 56.8
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 6.7e-81 305.8 523 61.2
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 2.0e-80 304.3 624 48.6
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 4.8e-79 299.7 543 52.5
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 4.8e-79 299.7 543 52.5
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 8.2e-79 298.9 518 60.4
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.1e-78 298.5 511 62.0
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 1.1e-78 298.5 542 49.8
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 1.8e-78 297.7 542 48.7
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 2.6e-77 293.9 523 60.2
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 2.6e-77 293.9 536 53.2
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 2.6e-77 293.9 536 53.2
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 2.6e-77 293.9 520 61.2
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 2.9e-76 290.4 543 54.3
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 5.0e-76 289.7 512 52.5
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 5.0e-76 289.7 527 61.5
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 1.9e-75 287.7 518 55.4
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 3.2e-75 287.0 536 52.8
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 4.7e-74 283.1 539 50.5
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 1.5e-72 278.1 408 63.7
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 7.0e-70 269.2 509 57.0
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 4.5e-69 266.5 366 68.6
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 7.7e-69 265.8 516 46.5
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 1.0e-68 265.4 457 53.0
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 2.1e-66 257.7 520 50.6
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 2.6e-64 250.8 437 56.1
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 2.8e-63 247.3 535 57.0
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 2.0e-61 241.1 534 54.9
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 3.5e-61 240.4 368 54.1
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 5.9e-61 239.6 527 57.7
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 1.0e-60 238.8 520 50.4
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 5.0e-60 236.5 439 51.9
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 6.5e-60 236.1 501 57.1
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 7.2e-59 232.6 541 54.9
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 2.2e-55 221.1 536 58.4
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 2.2e-55 221.1 543 44.8
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 4.8e-55 219.9 531 51.4
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 1.4e-54 218.4 435 54.0
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 1.6e-53 214.9 412 58.7
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 3.8e-52 210.3 152 67.1
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 3.8e-52 210.3 152 67.1
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 1.2e-50 205.3 520 44.8
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.2e-48 198.7 508 26.0
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 2.3e-44 184.5 475 52.2
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.8e-41 174.9 116 79.3
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 4.9e-39 166.8 333 59.8
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.2e-23 114.8 268 41.0
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.2e-22 110.9 148 83.1
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 4.6e-21 107.1 158 39.9
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 2.6e-16 91.3 145 51.7
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 2.8e-10 71.2 89 39.3
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.1e-06 59.3 41 70.7
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 1.1e-06 59.3 48 60.4
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 3.2e-06 57.8 48 58.3
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 4.2e-06 57.4 41 65.9
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 9.3e-06 56.2 49 61.2
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 9.3e-06 56.2 40 67.5


User provided reference genes

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