Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1099 Trochodendron aralioides HOM05D008595 ORTHO05D030706 2.6e-269 931.4 455 100.0
TAR362G0068 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.7e-50 204.5 152 68.4
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.0e-26 125.6 134 45.5
TAR374G1143 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.1e-24 117.9 122 46.7
TAR472G0003 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.0e-24 115.9 135 43.0
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-22 110.9 130 44.6
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.3e-22 110.5 125 44.8
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.3e-22 110.5 109 48.6
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.4e-22 109.4 106 48.1
Lsat_1_v5_gn_9_120321 Lactuca sativa HOM05D005763 ORTHO05D005970 1.4e-15 88.6 133 36.1
TAR623G0274 Trochodendron aralioides HOM05D001309 ORTHO05D030706 1.4e-15 88.6 48 81.2
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 1.8e-15 88.2 140 34.3
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 2.3e-15 87.8 142 30.3
TAR636G2786 Trochodendron aralioides HOM05D001309 ORTHO05D030706 3.0e-15 87.4 45 88.9
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.2e-15 86.7 150 32.0
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 6.8e-15 86.3 140 33.6
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.2e-14 85.5 140 33.6
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 1.5e-14 85.1 153 30.1
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 1.5e-14 85.1 137 35.8
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.5e-14 85.1 116 34.5
TAR623G0937 Trochodendron aralioides HOM05D001309 ORTHO05D030706 1.5e-14 85.1 48 77.1
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 2.0e-14 84.7 123 35.0
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 2.0e-14 84.7 128 33.6
TAR636G3673 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-14 84.7 76 55.3
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.5e-14 82.8 116 34.5
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 9.7e-14 82.4 130 32.3
MBI19_g00149_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.7e-14 82.4 118 32.2
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.3e-13 82.0 130 32.3
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 1.3e-13 82.0 130 32.3
COL.COLO4_23773 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.2e-13 81.3 145 32.4
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.2e-13 81.3 123 34.1
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 2.8e-13 80.9 135 34.8
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 3.7e-13 80.5 150 30.0
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.3e-13 79.7 123 31.7
COL.COLO4_29078 Corchorus olitorius HOM05D001309 ORTHO05D000385 6.3e-13 79.7 136 33.1
MBI05_g40697_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-12 79.0 140 30.7
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.4e-12 78.6 114 34.2
MBI16_g34941_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-12 78.6 138 31.2
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 1.8e-12 78.2 116 31.0
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 7.0e-12 76.3 129 30.2
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.0e-12 76.3 162 29.6
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.2e-11 75.5 112 31.2
Nn1g09472 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.7e-11 74.3 116 30.2
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 4.5e-11 73.6 114 33.3
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 4.5e-11 73.6 124 33.1
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 7.7e-11 72.8 148 29.1
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-10 72.4 121 30.6
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.0e-10 72.4 148 29.1
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.0e-10 72.4 148 29.1
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.0e-10 72.4 148 29.1
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-10 72.0 159 27.0
MBI12_g24830_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-10 72.0 100 36.0
TAR629G3448 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.2e-10 71.2 122 32.0
Gohir.D04G003250 Gossypium hirsutum HOM05D001309 ORTHO05D000385 2.9e-10 70.9 155 30.3
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.9e-10 70.9 148 28.4
Lsat_1_v5_gn_8_134701 Lactuca sativa HOM05D001309 ORTHO05D000385 3.8e-10 70.5 99 34.3
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 3.8e-10 70.5 129 28.7
COL.COLO4_15543 Corchorus olitorius HOM05D001309 ORTHO05D000385 5.0e-10 70.1 148 28.4
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 5.0e-10 70.1 129 27.1
TAR376G0513 Trochodendron aralioides HOM05D000015 ORTHO05D000249 5.0e-10 70.1 87 36.8
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 8.5e-10 69.3 123 35.0
ECA247G3253 Erigeron canadensis HOM05D005763 ORTHO05D005970 1.5e-09 68.6 164 26.2
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 1.9e-09 68.2 120 30.8
CANSAT21G1616 Cannabis sativa HOM05D002644 ORTHO05D000233 2.5e-09 67.8 122 32.8
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 3.2e-09 67.4 111 30.6
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-09 67.4 115 29.6
FvH4_1g28483 Fragaria vesca HOM05D000539 ORTHO05D000233 4.2e-09 67.0 102 31.4
FvH4_2g21272 Fragaria vesca HOM05D000539 ORTHO05D000233 4.2e-09 67.0 102 31.4
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 4.2e-09 67.0 118 25.4
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 4.2e-09 67.0 123 29.3
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 4.2e-09 67.0 150 26.0
arahy.Tifrunner.gnm1.ann1.U4Z5MQ Arachis hypogaea HOM05D010482 ORTHO05D000385 5.5e-09 66.6 109 31.2
EL10Ac1g01792 Beta vulgaris HOM05D008595 ORTHO05D010945 5.5e-09 66.6 174 24.7
EL10Ac6g14559 Beta vulgaris HOM05D008595 ORTHO05D010945 5.5e-09 66.6 127 28.3
EL10Ac8g19872 Beta vulgaris HOM05D008595 ORTHO05D010945 5.5e-09 66.6 136 26.5
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.5e-09 66.6 139 26.6
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-09 66.6 121 28.1
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 9.4e-09 65.9 120 30.0
EL10Ac1g02242 Beta vulgaris HOM05D008595 ORTHO05D010945 9.4e-09 65.9 127 29.1
EL10Ac6g14473 Beta vulgaris HOM05D008595 ORTHO05D010945 9.4e-09 65.9 127 27.6
FvH4_6g12902 Fragaria vesca HOM05D000539 ORTHO05D000233 9.4e-09 65.9 102 30.4
Gohir.D10G156350 Gossypium hirsutum HOM05D001309 ORTHO05D000385 9.4e-09 65.9 148 29.1
EL10Ac3g06761 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-08 65.5 127 27.6
EL10Ac3g06763 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-08 65.5 127 27.6
EL10Ac5g11175 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-08 65.5 127 27.6
EL10Ac5g11379 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-08 65.5 127 27.6
EL10Ac5g11789 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-08 65.5 127 27.6
EL10Ac7g16685 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-08 65.5 127 27.6
EL10Ac8g20153 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-08 65.5 127 27.6
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-08 65.5 127 27.6
Lj2g0015436 Lotus japonicus HOM05D002954 ORTHO05D010308 1.2e-08 65.5 116 30.2
EL10Ac2g03126 Beta vulgaris HOM05D008595 ORTHO05D010945 1.6e-08 65.1 127 27.6
EL10Ac5g11348 Beta vulgaris HOM05D008595 ORTHO05D010945 1.6e-08 65.1 137 27.0
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.1e-08 64.7 142 27.5
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 2.1e-08 64.7 140 27.1
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.1e-08 64.7 100 31.0
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 2.7e-08 64.3 118 29.7
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 2.7e-08 64.3 118 29.7
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.7e-08 64.3 149 26.2
FvH4_3g14251 Fragaria vesca HOM05D000539 ORTHO05D000233 4.7e-08 63.5 102 30.4
Lj4g0009512 Lotus japonicus HOM05D001309 ORTHO05D000385 6.1e-08 63.2 125 30.4
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.1e-08 63.2 98 30.6
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 6.1e-08 63.2 130 27.7
EL10Ac5g10887 Beta vulgaris HOM05D008595 ORTHO05D010945 8.0e-08 62.8 129 26.4
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 8.0e-08 62.8 132 28.8
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.0e-08 62.8 137 28.5
FvH4_1g20121 Fragaria vesca HOM05D000539 ORTHO05D000233 1.0e-07 62.4 102 30.4
EL10Ac4g08588 Beta vulgaris HOM05D008595 ORTHO05D010945 1.4e-07 62.0 127 26.8
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 1.4e-07 62.0 102 30.4
FvH4_3g31713 Fragaria vesca HOM05D000539 ORTHO05D000233 1.4e-07 62.0 112 29.5
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 1.8e-07 61.6 120 26.7
RcHm_v2.0_Chr2g0095191 Rosa chinensis HOM05D000107 ORTHO05D000062 1.8e-07 61.6 108 31.5
RcHm_v2.0_Chr6g0267111 Rosa chinensis HOM05D000539 ORTHO05D000233 1.8e-07 61.6 108 33.3
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.8e-07 61.6 114 25.4
Nitab4.5_0000522g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-07 61.2 119 28.6
RcHm_v2.0_Chr2g0123111 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-07 61.2 108 30.6
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 2.3e-07 61.2 125 30.4
EL10Ac8g19368 Beta vulgaris HOM05D008595 ORTHO05D010945 3.0e-07 60.8 127 26.0
COL.COLO4_08701 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.0e-07 60.8 124 29.0
COL.COLO4_06576 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.0e-07 60.5 143 24.5
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.0e-07 60.5 94 28.7
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 4.0e-07 60.5 193 24.9
SGA_v2.0_scaffold623G53232 Striga asiatica HOM05D004615 ORTHO05D000385 4.0e-07 60.5 122 27.0
EL10Ac5g11498 Beta vulgaris HOM05D008595 ORTHO05D010945 6.8e-07 59.7 195 24.1
FvH4_2g07752 Fragaria vesca HOM05D000539 ORTHO05D000233 6.8e-07 59.7 85 32.9
Nitab4.5_0022706g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 6.8e-07 59.7 139 27.3
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 6.8e-07 59.7 193 24.4
FvH4_6g23351 Fragaria vesca HOM05D000539 ORTHO05D000233 8.8e-07 59.3 112 28.6
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.8e-07 59.3 130 24.6
EL10Ac5g11465 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-06 58.9 127 26.8
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.2e-06 58.9 118 30.5
TAR383G0547 Trochodendron aralioides HOM05D000736 ORTHO05D002593 1.2e-06 58.9 63 49.2
EL10Ac6g14350 Beta vulgaris HOM05D008595 ORTHO05D010945 1.5e-06 58.5 105 31.4
Nn3g21442 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.5e-06 58.5 84 28.6
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-06 58.5 118 28.0
COL.COLO4_16333 Corchorus olitorius HOM05D011604 ORTHO05D012513 2.0e-06 58.2 134 23.9
FvH4_3g30982 Fragaria vesca HOM05D000539 ORTHO05D000233 2.0e-06 58.2 104 33.7
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 2.0e-06 58.2 133 27.8
MBI12_g08677_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D000385 2.6e-06 57.8 118 27.1
TAR266G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.6e-06 57.8 29 89.7
TAR622G1030 Trochodendron aralioides HOM05D000435 ORTHO05D000430 2.6e-06 57.8 34 73.5
EL10As20g24214 Beta vulgaris HOM05D008595 ORTHO05D010945 3.4e-06 57.4 94 30.9
Nn7g37626 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.4e-06 57.4 116 25.9
PSO832G1398 Papaver somniferum HOM05D001309 ORTHO05D000385 3.4e-06 57.4 124 30.6
Prupe.4G254500 Prunus persica HOM05D000539 ORTHO05D000233 3.4e-06 57.4 141 29.8
PGSC0003DMG400039419 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.4e-06 57.4 149 25.5
Zm00001eb234630 Zea mays HOM05D008576 ORTHO05D000385 3.4e-06 57.4 121 26.4
DCAR_006099 Daucus carota HOM05D022224 ORTHO05D000385 4.4e-06 57.0 132 25.0
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 4.4e-06 57.0 138 26.8
FAN02G2878 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.4e-06 57.0 104 32.7
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.4e-06 57.0 104 32.7
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-06 57.0 113 26.5
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 4.4e-06 57.0 125 25.6
Zm00001eb029070 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
Zm00001eb092990 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
Zm00001eb093010 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
Zm00001eb184880 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
Zm00001eb190070 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
Zm00001eb333630 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
Zm00001eb384730 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
Zm00001eb425380 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
Zm00001eb438630 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
Zm00001eb439020 Zea mays HOM05D008576 ORTHO05D000385 4.4e-06 57.0 121 26.4
EL10Ac1g01935 Beta vulgaris HOM05D008595 ORTHO05D010945 5.7e-06 56.6 113 25.7
FvH4_4g16571 Fragaria vesca HOM05D000539 ORTHO05D000233 5.7e-06 56.6 107 28.0
MBI15_g37112_MAGBIO Magnolia biondii HOM05D000308 ORTHO05D000194 5.7e-06 56.6 146 28.8
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 5.7e-06 56.6 128 25.8
RcHm_v2.0_Chr2g0102081 Rosa chinensis HOM05D000539 ORTHO05D000233 5.7e-06 56.6 118 26.3
Gohir.A12G105966 Gossypium hirsutum HOM05D040140 ORTHO05D000385 7.5e-06 56.2 100 28.0
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 7.5e-06 56.2 143 22.4
PGSC0003DMG400015737 Solanum tuberosum HOM05D001309 ORTHO05D000385 7.5e-06 56.2 104 28.8
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.5e-06 56.2 140 26.4
COL.COLO4_22621 Corchorus olitorius HOM05D008576 ORTHO05D000385 9.8e-06 55.8 145 27.6
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 9.8e-06 55.8 115 28.7
Nitab4.5_0000524g0110 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.8e-06 55.8 97 28.9
SGA_v2.0_scaffold279G46788 Striga asiatica HOM05D004615 ORTHO05D000385 9.8e-06 55.8 128 26.6
Zm00001eb027370 Zea mays HOM05D008576 ORTHO05D000385 9.8e-06 55.8 121 26.4


User provided reference genes

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