Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1073 Trochodendron aralioides HOM05D000015 ORTHO05D415342 6.0e-63 244.2 140 100.0
TAR628G1564 Trochodendron aralioides HOM05D000015 ORTHO05D001173 1.4e-11 73.6 37 94.6
COL.COLO4_03288 Corchorus olitorius HOM05D000015 ORTHO05D001173 2.6e-10 69.3 37 89.2
Rhsim11G0182600 Rhododendron simsii HOM05D000015 ORTHO05D001173 2.6e-10 69.3 37 86.5
MD05G1055900 Malus domestica HOM05D000015 ORTHO05D001173 3.4e-10 68.9 37 86.5
FAN15G3416 Fragaria x ananassa HOM05D000015 ORTHO05D001173 4.5e-10 68.6 37 86.5
FAN20G0262 Fragaria x ananassa HOM05D000015 ORTHO05D001173 4.5e-10 68.6 37 86.5
Actinidia00567 Actinidia chinensis HOM05D000015 ORTHO05D001173 5.9e-10 68.2 37 86.5
Duzib132G0091 Durio zibethinus HOM05D000015 ORTHO05D001173 5.9e-10 68.2 37 86.5
FAN24G1779 Fragaria x ananassa HOM05D000015 ORTHO05D001173 5.9e-10 68.2 37 83.8
MBI01_g21721_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D001173 5.9e-10 68.2 37 83.8
PSO675G8154 Papaver somniferum HOM05D000015 ORTHO05D001173 5.9e-10 68.2 37 81.1
Psat7g182240 Pisum sativum HOM05D000015 ORTHO05D001173 5.9e-10 68.2 37 86.5
Thecc.02G076700 Theobroma cacao HOM05D000015 ORTHO05D001173 5.9e-10 68.2 37 86.5
Zm00001eb319520 Zea mays HOM05D000015 ORTHO05D001173 5.9e-10 68.2 37 83.8
Dinv23466 Davidia involucrata HOM05D000015 ORTHO05D001173 7.6e-10 67.8 37 83.8
FvH4_2g10210 Fragaria vesca HOM05D000015 ORTHO05D001173 7.6e-10 67.8 37 83.8
PGR142G3457 Punica granatum HOM05D000015 ORTHO05D001173 7.6e-10 67.8 37 86.5
RcHm_v2.0_Chr6g0267441 Rosa chinensis HOM05D000015 ORTHO05D001173 1.0e-09 67.4 37 83.8
TWI79G0553 Tripterygium wilfordii HOM05D000015 ORTHO05D001173 1.0e-09 67.4 37 86.5
Gohir.A13G031000 Gossypium hirsutum HOM05D000015 ORTHO05D001173 1.3e-09 67.0 37 83.8
Gohir.D13G029000 Gossypium hirsutum HOM05D000015 ORTHO05D001173 1.3e-09 67.0 37 83.8
Gorai.013G033000 Gossypium raimondii HOM05D000015 ORTHO05D001173 1.3e-09 67.0 37 83.8
Medtr4g071560 Medicago truncatula HOM05D000015 ORTHO05D001173 1.7e-09 66.6 37 83.8
Zm00001eb103410 Zea mays HOM05D000015 ORTHO05D001173 1.7e-09 66.6 37 81.1
Atru.chr5.3129 Acer truncatum HOM05D000015 ORTHO05D001173 2.2e-09 66.2 37 78.4
Eucgr.I01318 Eucalyptus grandis HOM05D000015 ORTHO05D001173 2.2e-09 66.2 37 81.1
Nn6g32220 Nelumbo nucifera HOM05D000015 ORTHO05D001173 2.2e-09 66.2 37 81.1
PSO541G4534 Papaver somniferum HOM05D000015 ORTHO05D001173 2.2e-09 66.2 37 81.1
CSS0014785 Camellia sinensis var. sinensis HOM05D000015 ORTHO05D001173 2.9e-09 65.9 37 83.8
Duzib052G0800 Durio zibethinus HOM05D000015 ORTHO05D001173 2.9e-09 65.9 37 83.8
vmacro02060 Vaccinium macrocarpon HOM05D000015 ORTHO05D001173 2.9e-09 65.9 37 81.1
Glyma.11G111800 Glycine max HOM05D000015 ORTHO05D001173 5.0e-09 65.1 37 81.1
Phvul.011G039900 Phaseolus vulgaris HOM05D000015 ORTHO05D001173 5.0e-09 65.1 37 81.1
QL11p045903 Quercus lobata HOM05D000015 ORTHO05D001173 5.0e-09 65.1 37 81.1
QL11p045965 Quercus lobata HOM05D000015 ORTHO05D001173 5.0e-09 65.1 37 81.1
VMungo1127G0853 Vigna mungo HOM05D000015 ORTHO05D001173 5.0e-09 65.1 37 81.1
GSVIVG01024195001 Vitis vinifera HOM05D000015 ORTHO05D001173 5.0e-09 65.1 37 81.1
Lsat_1_v5_gn_4_67020 Lactuca sativa HOM05D002898 ORTHO05D003424 6.5e-09 64.7 37 78.4
Prupe.8G086300 Prunus persica HOM05D000015 ORTHO05D001173 6.5e-09 64.7 37 78.4
Cpa.g.sc1497.1 Carica papaya HOM05D000015 ORTHO05D001173 8.5e-09 64.3 37 78.4
Ciclev10027857m.g Citrus clementina HOM05D000015 ORTHO05D001173 8.5e-09 64.3 37 78.4
Potri.004G161400 Populus trichocarpa HOM05D000015 ORTHO05D001173 8.5e-09 64.3 37 78.4
Hund06276 Selenicereus undatus HOM05D000015 ORTHO05D001173 8.5e-09 64.3 37 78.4
Dinv42009 Davidia involucrata HOM05D000015 ORTHO05D001173 1.1e-08 63.9 37 81.1
Nn5g29201 Nelumbo nucifera HOM05D000015 ORTHO05D001173 1.1e-08 63.9 37 78.4
CiPaw.05G073000 Carya illinoinensis HOM05D000015 ORTHO05D001173 1.4e-08 63.5 37 73.0
QL11p045885 Quercus lobata HOM05D000015 ORTHO05D001173 1.9e-08 63.2 37 75.7
QL11p045949 Quercus lobata HOM05D000015 ORTHO05D001173 1.9e-08 63.2 37 75.7
Sabra04G0108300 Salix brachista HOM05D000015 ORTHO05D001173 1.9e-08 63.2 37 75.7
ATR0661G127 Amborella trichopoda HOM05D000015 ORTHO05D001173 7.2e-08 61.2 36 75.0
Cfa005095 Carpinus fangiana HOM05D000015 ORTHO05D001173 7.2e-08 61.2 37 73.0
Haze_02280 Corylus avellana HOM05D000013 ORTHO05D000689 7.2e-08 61.2 37 73.0
SEGI_22061 Sequoiadendron giganteum HOM05D000015 ORTHO05D001173 7.2e-08 61.2 37 73.0
HanXRQChr15g0472841 Helianthus annuus HOM05D000015 ORTHO05D010404 1.6e-07 60.1 37 73.0
Oeu008602.1 Olea europaea HOM05D000015 ORTHO05D001173 2.1e-07 59.7 37 70.3
SEGI_28158 Sequoiadendron giganteum HOM05D000015 ORTHO05D000984 6.1e-07 58.2 46 58.7
Eucgr.A01377 Eucalyptus grandis HOM05D000015 ORTHO05D000984 1.0e-06 57.4 37 70.3
Mapoly0013s0084 Marchantia polymorpha HOM05D000015 ORTHO05D000984 1.3e-06 57.0 50 54.0
ATR1145G057 Amborella trichopoda HOM05D000015 ORTHO05D001173 1.8e-06 56.6 40 70.0
Phvul.011G012100 Phaseolus vulgaris HOM05D000015 ORTHO05D001173 1.8e-06 56.6 39 74.4
SEGI_24736 Sequoiadendron giganteum HOM05D000015 ORTHO05D000984 3.0e-06 55.8 37 67.6
CiPaw.10G084000 Carya illinoinensis HOM05D000015 ORTHO05D000984 6.7e-06 54.7 33 75.8
SGA_v2.0_scaffold145G36077 Striga asiatica HOM05D000015 ORTHO05D002445 6.7e-06 54.7 37 67.6
MSTRG.1167 Avicennia marina HOM05D000015 ORTHO05D002445 8.7e-06 54.3 37 67.6
SMO351G0429 Selaginella moellendorffii HOM05D000015 ORTHO05D004138 8.7e-06 54.3 57 47.4


User provided reference genes

Program Settings