Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.8e-50 201.1 93 100.0
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 2.6e-38 161.8 88 84.1
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 9.8e-38 159.8 88 80.7
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 9.8e-38 159.8 87 81.6
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 6.4e-37 157.1 87 80.5
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 8.3e-37 156.8 89 80.9
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.2e-35 152.9 86 79.1
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.6e-35 152.5 86 81.4
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 1.6e-35 152.5 89 76.4
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 2.0e-35 152.1 89 78.7
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 2.0e-35 152.1 88 81.8
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.7e-35 151.8 88 81.8
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 2.7e-35 151.8 87 80.5
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 2.7e-35 151.8 87 79.3
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 3.5e-35 151.4 88 80.7
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.5e-35 151.4 88 80.7
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.5e-35 151.4 87 79.3
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 4.6e-35 151.0 88 76.1
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 4.6e-35 151.0 88 80.7
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 7.8e-35 150.2 88 77.3
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 7.8e-35 150.2 88 79.5
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.3e-34 149.4 82 85.4
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 3.0e-34 148.3 86 80.2
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 3.0e-34 148.3 86 80.2
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.9e-34 147.9 88 78.4
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 5.0e-34 147.5 87 75.9
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.1e-33 146.4 89 75.3
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.1e-33 146.4 89 76.4
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.5e-33 146.0 90 77.8
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 1.9e-33 145.6 86 77.9
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.9e-33 145.6 82 82.9
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 2.5e-33 145.2 80 80.0
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 2.5e-33 145.2 89 74.2
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 3.3e-33 144.8 85 76.5
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.3e-33 144.4 89 76.4
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 9.5e-33 143.3 90 70.0
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 9.5e-33 143.3 91 72.5
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 1.2e-32 142.9 83 78.3
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.2e-32 142.9 88 77.3
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.2e-32 142.9 84 82.1
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 2.8e-32 141.7 88 71.6
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 4.7e-32 141.0 90 72.2
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 1.1e-31 139.8 81 76.5
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 1.1e-31 139.8 87 73.6
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 5.2e-31 137.5 87 70.1
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 6.8e-31 137.1 82 78.0
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 6.8e-31 137.1 89 73.0
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 8.9e-31 136.7 83 77.1
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 8.9e-31 136.7 89 74.2
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 8.9e-31 136.7 88 71.6
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.2e-30 136.3 90 68.9
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.5e-30 136.0 84 71.4
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 3.4e-30 134.8 79 75.9
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 3.4e-30 134.8 79 75.9
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 3.4e-30 134.8 87 70.1
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 4.4e-30 134.4 82 74.4
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 4.4e-30 134.4 82 74.4
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 5.8e-30 134.0 79 73.4
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 7.5e-30 133.7 90 71.1
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 2.9e-29 131.7 84 72.6
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.7e-29 131.3 79 69.6
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.7e-29 131.3 79 69.6
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.4e-28 129.4 79 70.9
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 1.9e-28 129.0 89 70.8
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 2.4e-28 128.6 96 66.7
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 3.2e-28 128.3 81 70.4
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 5.4e-28 127.5 81 72.8
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 3.5e-27 124.8 100 63.0
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 1.0e-26 123.2 86 66.3
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.7e-26 122.5 82 73.2
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 1.7e-26 122.5 95 60.0
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.7e-26 122.5 89 69.7
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 3.0e-26 121.7 90 64.4
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 5.1e-26 120.9 92 64.1
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 8.6e-26 120.2 81 71.6
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 4.3e-25 117.9 82 70.7
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.2e-24 116.3 70 77.1
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 2.1e-24 115.5 93 55.9
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 3.6e-24 114.8 96 60.4
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 8.1e-24 113.6 83 67.5
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 2.3e-23 112.1 86 62.8
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 5.2e-23 110.9 91 62.6
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 5.8e-22 107.5 81 65.4
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 7.6e-22 107.1 86 61.6
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 9.9e-22 106.7 79 62.0
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 2.4e-20 102.1 74 63.5
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.6e-19 99.4 88 55.7
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 4.6e-19 97.8 73 63.0
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 6.0e-19 97.4 76 60.5
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 7.8e-19 97.1 60 75.0
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.6e-18 94.0 82 58.5
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.1e-17 93.2 84 54.8
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.9e-17 92.4 79 55.7
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 1.2e-16 89.7 89 48.3
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 1.1e-15 86.7 89 51.7
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 3.2e-12 75.1 85 49.4
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.5e-09 65.5 87 42.5
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 9.6e-09 63.5 47 59.6
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 1.4e-07 59.7 76 39.5
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 4.0e-07 58.2 48 58.3


User provided reference genes

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