Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0902 Trochodendron aralioides HOM05D006208 ORTHO05D007606 8.8e-137 490.3 259 100.0
vmacro07634 Vaccinium macrocarpon HOM05D006208 ORTHO05D007606 3.1e-49 199.5 161 64.6
Dinv14560 Davidia involucrata HOM05D006208 ORTHO05D007606 6.1e-45 185.3 162 61.7
Nn8g39480 Nelumbo nucifera HOM05D006208 ORTHO05D007606 2.3e-44 183.3 161 59.0
Thecc.05G239100 Theobroma cacao HOM05D006208 ORTHO05D007606 3.0e-44 183.0 163 55.8
Duzib177G0527 Durio zibethinus HOM05D006208 ORTHO05D007606 5.7e-43 178.7 163 54.6
Manes.08G150900 Manihot esculenta HOM05D006208 ORTHO05D007606 9.7e-43 177.9 162 58.0
GSVIVG01029918001 Vitis vinifera HOM05D006208 ORTHO05D007606 1.3e-42 177.6 162 56.8
MD12G1014000 Malus domestica HOM05D006208 ORTHO05D007606 2.2e-42 176.8 161 56.5
Potri.013G067600 Populus trichocarpa HOM05D006208 ORTHO05D007606 2.2e-42 176.8 162 56.8
Lj1A1159G88 Lonicera japonica HOM05D006208 ORTHO05D007606 4.8e-42 175.6 162 55.6
QL07p016540 Quercus lobata HOM05D006208 ORTHO05D007606 4.8e-42 175.6 164 57.3
Hma1.2p1_0776F.1_g216610 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 1.4e-41 174.1 160 58.1
RcHm_v2.0_Chr3g0495701 Rosa chinensis HOM05D006208 ORTHO05D007606 1.4e-41 174.1 163 54.6
AUR62036506 Chenopodium quinoa HOM05D006208 ORTHO05D007606 1.2e-40 171.0 159 53.5
Hma1.2p1_1127F.1_g259670 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 1.5e-40 170.6 160 57.5
Gorai.013G113800 Gossypium raimondii HOM05D006208 ORTHO05D007606 2.0e-40 170.2 143 58.7
Gohir.D13G101700 Gossypium hirsutum HOM05D006208 ORTHO05D007606 2.6e-40 169.9 143 58.7
EL10As12g24012 Beta vulgaris HOM05D006208 ORTHO05D007606 3.5e-40 169.5 157 57.3
TWI34G1475 Tripterygium wilfordii HOM05D006208 ORTHO05D007606 3.5e-40 169.5 160 55.6
Ciclev10032470m.g Citrus clementina HOM05D006208 ORTHO05D007606 1.7e-39 167.2 161 54.7
Sabra13G0059000 Salix brachista HOM05D006208 ORTHO05D007606 3.8e-39 166.0 164 53.7
SGA_v2.0_scaffold66G22407 Striga asiatica HOM05D006208 ORTHO05D007606 3.8e-39 166.0 159 56.0
Gohir.A13G096300 Gossypium hirsutum HOM05D006208 ORTHO05D007606 6.5e-39 165.2 143 57.3
Hund10725 Selenicereus undatus HOM05D006208 ORTHO05D007606 6.5e-39 165.2 160 54.4
MBI19_g04334_MAGBIO Magnolia biondii HOM05D006208 ORTHO05D007606 1.1e-38 164.5 162 58.0
Lalb_Chr22g0358421 Lupinus albus HOM05D006208 ORTHO05D007606 2.5e-38 163.3 160 52.5
FAN13G0695 Fragaria x ananassa HOM05D006208 ORTHO05D007606 3.2e-38 162.9 161 54.7
Cpa.g.sc73.15 Carica papaya HOM05D006208 ORTHO05D007606 4.2e-38 162.5 163 52.1
Glyma.19G119400 Glycine max HOM05D006208 ORTHO05D007606 4.2e-38 162.5 183 48.1
Medtr7g087140 Medicago truncatula HOM05D006208 ORTHO05D007606 4.2e-38 162.5 164 51.2
Solyc10g085660.3 Solanum lycopersicum HOM05D006208 ORTHO05D007606 5.5e-38 162.2 164 50.0
Ca_03440_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 7.2e-38 161.8 159 53.5
Ca_08778_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 7.2e-38 161.8 159 53.5
Atru.chr2.1570 Acer truncatum HOM05D006208 ORTHO05D007606 1.2e-37 161.0 164 54.9
MELO3C019160.2 Cucumis melo HOM05D006208 ORTHO05D007606 1.2e-37 161.0 163 55.2
Sopen10g035070 Solanum pennellii HOM05D006208 ORTHO05D007606 1.2e-37 161.0 159 51.6
A06p05650 Brassica napus HOM05D000200 ORTHO05D000262 1.6e-37 160.6 163 50.9
BraA06t23774Z Brassica rapa HOM05D000200 ORTHO05D000262 3.6e-37 159.5 163 50.3
CANSAT78G0878 Cannabis sativa HOM05D006208 ORTHO05D007606 3.6e-37 159.5 166 50.6
Cc03_g15330 Coffea canephora HOM05D006208 ORTHO05D007606 3.6e-37 159.5 159 52.2
Eucgr.K01547 Eucalyptus grandis HOM05D006208 ORTHO05D007606 4.7e-37 159.1 163 49.7
BcaB07g34110 Brassica carinata HOM05D006208 ORTHO05D007606 6.1e-37 158.7 164 51.8
COL.COLO4_08902 Corchorus olitorius HOM05D006208 ORTHO05D007606 6.1e-37 158.7 164 52.4
FAN04G2426 Fragaria x ananassa HOM05D006208 ORTHO05D007606 6.1e-37 158.7 162 54.3
PGSC0003DMG400008402 Solanum tuberosum HOM05D006208 ORTHO05D007606 8.0e-37 158.3 162 50.6
Nitab4.5_0015172g0010 Nicotiana tabacum HOM05D006208 ORTHO05D007606 1.0e-36 157.9 143 55.9
FAN18G4346 Fragaria x ananassa HOM05D006208 ORTHO05D007606 1.4e-36 157.5 162 54.3
VMungo1383G1214 Vigna mungo HOM05D006208 ORTHO05D007606 1.4e-36 157.5 164 52.4
BcaC05g24798 Brassica carinata HOM05D006208 ORTHO05D007606 2.3e-36 156.8 170 48.2
Nitab4.5_0000381g0210 Nicotiana tabacum HOM05D006208 ORTHO05D007606 3.9e-36 156.0 138 57.2
SalBow6G5221 Salvia bowleyana HOM05D006208 ORTHO05D007606 6.7e-36 155.2 159 52.8
FvH4_5g39040 Fragaria vesca HOM05D006208 ORTHO05D007606 1.1e-35 154.5 162 53.1
Aqoxy6G01592 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 2.6e-35 153.3 168 47.6
DCAR_020701 Daucus carota HOM05D006208 ORTHO05D007606 3.3e-35 152.9 181 49.2
ClCG04G006060 Citrullus lanatus HOM05D006208 ORTHO05D007606 4.4e-35 152.5 249 41.4
CiPaw.09G165300 Carya illinoinensis HOM05D006208 ORTHO05D007606 5.7e-35 152.1 179 48.6
Migut.B00931 Erythranthe guttata HOM05D006208 ORTHO05D007606 5.7e-35 152.1 159 52.2
CARHR008630 Cardamine hirsuta HOM05D006208 ORTHO05D007606 9.7e-35 151.4 164 50.0
Carub.0001s0806 Capsella rubella HOM05D006208 ORTHO05D007606 1.3e-34 151.0 163 49.7
unitig_0.g581 Utricularia gibba HOM05D006208 ORTHO05D007606 2.2e-34 150.2 139 58.3
AT1G08710 Arabidopsis thaliana HOM05D006208 ORTHO05D007606 2.8e-34 149.8 163 48.5
MSTRG.19726 Avicennia marina HOM05D006208 ORTHO05D007606 8.2e-34 148.3 159 51.6
CAN.G1018.11 Capsicum annuum HOM05D006208 ORTHO05D007606 3.1e-33 146.4 159 45.9
FvH4_3g02594 Fragaria vesca HOM05D006208 ORTHO05D007606 3.1e-33 146.4 176 50.0
arahy.Tifrunner.gnm1.ann1.71CHM8 Arachis hypogaea HOM05D006208 ORTHO05D007606 4.1e-33 146.0 164 50.0
Cfa019872 Carpinus fangiana HOM05D006208 ORTHO05D007606 5.3e-33 145.6 138 55.8
Thhalv10008513m.g Eutrema salsugineum HOM05D006208 ORTHO05D007606 9.1e-33 144.8 169 49.1
Peaxi162Scf00146g00097 Petunia axillaris HOM05D006208 ORTHO05D007606 9.1e-33 144.8 159 45.9
Sp1g07360 Schrenkiella parvula HOM05D006208 ORTHO05D007606 1.6e-32 144.1 163 49.1
Lj1g0003173 Lotus japonicus HOM05D006208 ORTHO05D007606 2.0e-32 143.7 161 47.8
AL1G19150 Arabidopsis lyrata HOM05D006208 ORTHO05D007606 2.6e-32 143.3 164 49.4
THA.LOC104798848 Tarenaya hassleriana HOM05D006208 ORTHO05D007606 7.7e-32 141.7 168 48.2
ECA232G0512 Erigeron canadensis HOM05D006208 ORTHO05D007606 1.3e-31 141.0 165 48.5
Sed0009124 Sechium edule HOM05D006208 ORTHO05D007606 2.2e-31 140.2 154 51.9
Aa31sc449G40 Aethionema arabicum HOM05D006208 ORTHO05D007606 2.9e-31 139.8 159 45.9
ATR0068G109 Amborella trichopoda HOM05D006208 ORTHO05D007606 6.5e-31 138.7 164 45.7
HanXRQChr09g0255371 Helianthus annuus HOM05D006208 ORTHO05D007606 1.1e-30 137.9 167 46.1
Sc22g0000860 Simmondsia chinensis HOM05D006208 ORTHO05D007606 2.7e-29 133.3 103 68.9
HPP92_022884 Vanilla planifolia HOM05D006208 ORTHO05D007606 8.0e-29 131.7 143 50.3
TAR628G1465 Trochodendron aralioides HOM05D000093 ORTHO05D000835 2.3e-28 130.2 76 93.4
Peaxi162Scf00146g00107 Petunia axillaris HOM05D006208 ORTHO05D007606 1.2e-27 127.9 137 48.2
Peaxi162Scf62544g00003 Petunia axillaris HOM05D006208 ORTHO05D007606 1.2e-27 127.9 137 48.2
CDE09G0594 Ceratophyllum demersum HOM05D002946 ORTHO05D007606 2.6e-27 126.7 163 43.6
Lsat_1_v5_gn_4_159701 Lactuca sativa HOM05D006208 ORTHO05D007606 4.4e-27 125.9 162 44.4
Haze_20379 Corylus avellana HOM05D006208 ORTHO05D007606 5.7e-27 125.6 158 47.5
AUR62037069 Chenopodium quinoa HOM05D006208 ORTHO05D007606 9.7e-27 124.8 116 53.4
Psat3g085200 Pisum sativum HOM05D006208 ORTHO05D007606 1.4e-25 120.9 117 55.6
Phvul.001G107700 Phaseolus vulgaris HOM05D006208 ORTHO05D007606 3.1e-25 119.8 116 51.7
Ah.12g062010 Amaranthus hybridus HOM05D006208 ORTHO05D007606 2.0e-24 117.1 124 49.2
Rhsim03G0045700 Rhododendron simsii HOM05D006208 ORTHO05D007606 2.7e-24 116.7 99 61.6
arahy.Tifrunner.gnm1.ann1.2NMK5X Arachis hypogaea HOM05D006208 ORTHO05D007606 7.7e-24 115.2 116 53.4
TPR.G35926 Trifolium pratense HOM05D006208 ORTHO05D007606 2.9e-23 113.2 103 56.3
SEGI_27241 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 1.1e-22 111.3 157 40.8
CsaV3_4G029050 Cucumis sativus L. HOM05D006208 ORTHO05D007606 6.1e-21 105.5 104 55.8
FAN08G0500 Fragaria x ananassa HOM05D006208 ORTHO05D007606 6.1e-21 105.5 100 58.0
Zm00001eb149890 Zea mays HOM05D006208 ORTHO05D007606 1.2e-19 101.3 104 48.1
SHI14855 Sapria himalayana HOM05D000023 ORTHO05D000014 4.8e-18 95.9 167 38.9
Os01g0814700 Oryza sativa ssp. japonica HOM05D006208 ORTHO05D007606 1.1e-17 94.7 104 45.2
Pp3c18_14450 Physcomitrium patens HOM05D006208 ORTHO05D007606 3.1e-17 93.2 137 34.3
FAN21G1425 Fragaria x ananassa HOM05D006208 ORTHO05D007606 7.0e-17 92.0 84 60.7
CBR_g36542 Chara braunii HOM05D006208 ORTHO05D007606 1.4e-12 77.8 134 32.8
Medtr7g087330 Medicago truncatula HOM05D006208 ORTHO05D007606 1.8e-12 77.4 102 44.1
Rhsim03G0045600 Rhododendron simsii HOM05D006208 ORTHO05D007606 5.2e-12 75.9 62 61.3
SalBow5G5293 Salvia bowleyana HOM05D000001 ORTHO05D009952 6.8e-12 75.5 112 42.0
Oeu054958.1 Olea europaea HOM05D006208 ORTHO05D007606 1.2e-11 74.7 78 52.6
C05p06810 Brassica napus HOM05D000200 ORTHO05D000262 5.7e-11 72.4 81 48.1
BolC5t29440H Brassica oleracea HOM05D000200 ORTHO05D000262 5.7e-11 72.4 81 48.1
AagrBONN_evm.TU.Sc2ySwM_117.1480 Anthoceros agrestis HOM05D006208 ORTHO05D007606 2.4e-09 67.0 145 26.2
SMO351G0165 Selaginella moellendorffii HOM05D006208 ORTHO05D007606 4.1e-09 66.2 147 27.2
Prupe.7G018500 Prunus persica HOM05D006208 ORTHO05D007606 1.6e-08 64.3 65 47.7
Aqoxy6G02519 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 4.3e-06 56.2 53 50.9
AL5G15230 Arabidopsis lyrata HOM05D001124 ORTHO05D007606 5.6e-06 55.8 65 41.5
TPR.G7816 Trifolium pratense HOM05D006208 ORTHO05D007606 5.6e-06 55.8 56 48.2
TPR.G7831 Trifolium pratense HOM05D006208 ORTHO05D007606 9.5e-06 55.1 82 39.0


User provided reference genes

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