Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0871 Trochodendron aralioides HOM05D009842 ORTHO05D011134 1.2e-104 383.3 197 100.0
Nn2g10535 Nelumbo nucifera HOM05D009842 ORTHO05D011134 7.6e-56 221.1 184 66.8
PSO339G5653 Papaver somniferum HOM05D009842 ORTHO05D011134 4.5e-48 195.3 172 61.0
PSO384G1346 Papaver somniferum HOM05D009842 ORTHO05D011134 1.9e-46 189.9 180 58.3
Dinv31397 Davidia involucrata HOM05D009842 ORTHO05D011134 3.9e-44 182.2 168 61.9
Actinidia38217 Actinidia chinensis HOM05D009842 ORTHO05D011134 5.7e-43 178.3 188 53.2
ClCG02G013580 Citrullus lanatus HOM05D009842 ORTHO05D011134 1.4e-38 163.7 170 56.5
MELO3C023815.2 Cucumis melo HOM05D009842 ORTHO05D011134 3.2e-38 162.5 163 54.0
CsaV3_5G006590 Cucumis sativus L. HOM05D009842 ORTHO05D011134 9.3e-38 161.0 170 54.7
Solyc05g054840.3 Solanum lycopersicum HOM05D009842 ORTHO05D011134 1.0e-36 157.5 186 50.5
Sopen05g033310 Solanum pennellii HOM05D009842 ORTHO05D011134 3.3e-35 152.5 186 48.4
PGSC0003DMG400023509 Solanum tuberosum HOM05D009842 ORTHO05D011134 3.3e-35 152.5 188 48.9
Nitab4.5_0000914g0210 Nicotiana tabacum HOM05D009842 ORTHO05D011134 2.8e-34 149.4 170 51.8
MD01G1118400 Malus domestica HOM05D009842 ORTHO05D011134 3.7e-34 149.1 170 52.4
Sed0020761 Sechium edule HOM05D009842 ORTHO05D011134 1.4e-33 147.1 170 52.4
TWI38G0364 Tripterygium wilfordii HOM05D009842 ORTHO05D011134 1.8e-33 146.7 145 55.9
Nitab4.5_0011080g0030 Nicotiana tabacum HOM05D000454 ORTHO05D000591 2.0e-32 143.3 170 50.0
Prupe.2G225500 Prunus persica HOM05D009842 ORTHO05D011134 3.4e-32 142.5 176 48.3
PGR142G3647 Punica granatum HOM05D009842 ORTHO05D011134 5.9e-32 141.7 173 48.0
Cc02_g08540 Coffea canephora HOM05D009842 ORTHO05D011134 5.0e-31 138.7 166 49.4
HPP92_006590 Vanilla planifolia HOM05D009842 ORTHO05D011134 7.2e-30 134.8 160 45.6
CSS0009421 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 1.0e-23 114.4 167 44.9
CSS0024730 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 1.1e-22 110.9 182 42.3
Os05g0120800 Oryza sativa ssp. japonica HOM05D009842 ORTHO05D011134 4.7e-21 105.5 156 41.7
SMO165G0144 Selaginella moellendorffii HOM05D013267 ORTHO05D011134 2.6e-19 99.8 213 32.9
Zm00001eb265980 Zea mays HOM05D009842 ORTHO05D011134 7.4e-19 98.2 157 42.0
Actinidia02992 Actinidia chinensis HOM05D009842 ORTHO05D011134 2.2e-18 96.7 170 36.5
AagrBONN_evm.TU.Sc2ySwM_368.1565 Anthoceros agrestis HOM05D013267 ORTHO05D011134 1.8e-17 93.6 237 29.5
Mapoly0003s0076 Marchantia polymorpha HOM05D013267 ORTHO05D011134 4.1e-17 92.4 217 32.3
Peaxi162Scf00015g02512 Petunia axillaris HOM05D009842 ORTHO05D011134 2.9e-15 86.3 179 34.1
MCO02G316 Micromonas commoda HOM05D013267 ORTHO05D011134 6.5e-15 85.1 218 29.8
CBR_g29428 Chara braunii HOM05D013267 ORTHO05D011134 6.7e-12 75.1 222 26.1
Cre16.g688450 Chlamydomonas reinhardtii HOM05D013267 ORTHO05D011134 2.9e-07 59.7 215 27.4
PRCOL_00002030 Prasinoderma coloniale HOM05D013267 ORTHO05D011134 1.1e-06 57.8 219 25.6


User provided reference genes

Program Settings