Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0852 Trochodendron aralioides HOM05D002346 ORTHO05D002452 4.6e-64 247.7 120 100.0
TAR622G0175 Trochodendron aralioides HOM05D002346 ORTHO05D002452 4.5e-35 151.4 159 56.0
TAR629G1897 Trochodendron aralioides HOM05D002346 ORTHO05D002452 6.1e-24 114.4 159 44.0
TAR371G1067 Trochodendron aralioides HOM05D002346 ORTHO05D002452 1.1e-20 103.6 99 55.6
Nn4g22002 Nelumbo nucifera HOM05D002346 ORTHO05D002452 3.1e-20 102.1 160 38.8
Nn4g24302 Nelumbo nucifera HOM05D002346 ORTHO05D002452 3.1e-20 102.1 160 38.8
Nn3g18329 Nelumbo nucifera HOM05D002346 ORTHO05D002452 7.7e-19 97.4 156 39.1
Potri.008G133400 Populus trichocarpa HOM05D002346 ORTHO05D002452 3.6e-16 88.6 117 41.0
MBI12_g03774_MAGBIO Magnolia biondii HOM05D002346 ORTHO05D002452 1.0e-15 87.0 98 52.0
Dinv26254 Davidia involucrata HOM05D002346 ORTHO05D002452 1.2e-14 83.6 103 41.7
FAN07G0308 Fragaria x ananassa HOM05D002346 ORTHO05D002452 1.5e-14 83.2 100 45.0
GSVIVG01011679001 Vitis vinifera HOM05D002346 ORTHO05D002452 3.4e-14 82.0 150 37.3
FAN12G1941 Fragaria x ananassa HOM05D002346 ORTHO05D002452 5.7e-14 81.3 100 44.0
CiPaw.06G049900 Carya illinoinensis HOM05D002346 ORTHO05D002452 1.7e-13 79.7 95 44.2
PSO478G3203 Papaver somniferum HOM05D002346 ORTHO05D002452 2.2e-13 79.3 103 45.6
RcHm_v2.0_Chr4g0443341 Rosa chinensis HOM05D002346 ORTHO05D002452 2.2e-13 79.3 95 45.3
Dinv09300 Davidia involucrata HOM05D002346 ORTHO05D002452 2.8e-13 79.0 98 43.9
PSO017G7279 Papaver somniferum HOM05D002346 ORTHO05D002452 3.7e-13 78.6 103 45.6
FAN22G0391 Fragaria x ananassa HOM05D002346 ORTHO05D002452 8.3e-13 77.4 100 43.0
FAN17G3128 Fragaria x ananassa HOM05D002346 ORTHO05D002452 1.1e-12 77.0 100 43.0
MD13G1030000 Malus domestica HOM05D002346 ORTHO05D002452 1.1e-12 77.0 96 45.8
Duzib251G0217 Durio zibethinus HOM05D002346 ORTHO05D002452 1.8e-12 76.3 149 33.6
QL10p031070 Quercus lobata HOM05D002346 ORTHO05D002452 2.4e-12 75.9 107 38.3
MBI19_g20041_MAGBIO Magnolia biondii HOM05D002346 ORTHO05D002452 3.1e-12 75.5 159 35.8
Aqoxy3G00036 Aquilegia oxysepala HOM05D002346 ORTHO05D002452 4.1e-12 75.1 96 42.7
Haze_10914 Corylus avellana HOM05D002346 ORTHO05D002452 4.1e-12 75.1 94 42.6
CSS0012514 Camellia sinensis var. sinensis HOM05D002346 ORTHO05D002452 5.4e-12 74.7 93 45.2
CSS0022053 Camellia sinensis var. sinensis HOM05D002346 ORTHO05D002452 5.4e-12 74.7 93 45.2
Thecc.02G290400 Theobroma cacao HOM05D002346 ORTHO05D002452 1.6e-11 73.2 149 32.2
Nitab4.5_0001546g0010 Nicotiana tabacum HOM05D002346 ORTHO05D002452 2.0e-11 72.8 71 50.7
Sabra10G0079200 Salix brachista HOM05D002346 ORTHO05D002452 2.7e-11 72.4 94 41.5
Prupe.1G331500 Prunus persica HOM05D002346 ORTHO05D002452 3.5e-11 72.0 95 45.3
Dinv28069 Davidia involucrata HOM05D002346 ORTHO05D002452 5.9e-11 71.2 87 43.7
Atru.chr9.1665 Acer truncatum HOM05D002346 ORTHO05D002452 1.0e-10 70.5 104 38.5
Cc11_g08030 Coffea canephora HOM05D002346 ORTHO05D002452 1.0e-10 70.5 124 36.3
Phvul.003G021000 Phaseolus vulgaris HOM05D002346 ORTHO05D002452 1.7e-10 69.7 113 37.2
Ciclev10015656m.g Citrus clementina HOM05D002346 ORTHO05D002452 2.3e-10 69.3 153 30.1
Manes.06G004000 Manihot esculenta HOM05D002346 ORTHO05D002452 2.9e-10 68.9 106 34.0
Ca_23619_v3 Cicer arietinum L. HOM05D002346 ORTHO05D002452 3.8e-10 68.6 125 32.0
Rhsim09G0091800 Rhododendron simsii HOM05D002346 ORTHO05D002452 3.8e-10 68.6 93 40.9
VMungo0251G1609 Vigna mungo HOM05D002346 ORTHO05D002452 3.8e-10 68.6 98 34.7
Cfa019631 Carpinus fangiana HOM05D002346 ORTHO05D002452 5.0e-10 68.2 114 37.7
Nitab4.5_0000238g0080 Nicotiana tabacum HOM05D002346 ORTHO05D002452 5.0e-10 68.2 71 47.9
Sabra15G0029500 Salix brachista HOM05D002346 ORTHO05D002452 5.0e-10 68.2 109 39.4
Actinidia27765 Actinidia chinensis HOM05D002346 ORTHO05D002452 6.6e-10 67.8 88 46.6
Lj4g0025032 Lotus japonicus HOM05D002346 ORTHO05D002452 6.6e-10 67.8 123 31.7
FvH4_4g33850 Fragaria vesca HOM05D002346 ORTHO05D002452 8.6e-10 67.4 133 35.3
Manes.15G133000 Manihot esculenta HOM05D002346 ORTHO05D002452 1.1e-09 67.0 97 37.1
COL.COLO4_28884 Corchorus olitorius HOM05D002346 ORTHO05D002452 1.9e-09 66.2 94 39.4
Haze_18893 Corylus avellana HOM05D002346 ORTHO05D002452 1.9e-09 66.2 114 36.8
Hma1.2p1_0163F.1_g072950 Hydrangea macrophylla HOM05D002346 ORTHO05D002452 1.9e-09 66.2 110 34.5
Potri.012G044900 Populus trichocarpa HOM05D002346 ORTHO05D002452 1.9e-09 66.2 108 38.0
Actinidia12384 Actinidia chinensis HOM05D002346 ORTHO05D002452 3.3e-09 65.5 90 41.1
Gohir.A01G148700 Gossypium hirsutum HOM05D002346 ORTHO05D002452 3.3e-09 65.5 146 30.1
CAN.G843.41 Capsicum annuum HOM05D002346 ORTHO05D002452 7.2e-09 64.3 98 37.8
Manes.17G082100 Manihot esculenta HOM05D002346 ORTHO05D002452 7.2e-09 64.3 94 38.3
PGSC0003DMG400014187 Solanum tuberosum HOM05D002346 ORTHO05D002452 7.2e-09 64.3 101 37.6
vmacro10688 Vaccinium macrocarpon HOM05D002346 ORTHO05D002452 7.2e-09 64.3 90 40.0
QL03p034902 Quercus lobata HOM05D002346 ORTHO05D002452 9.5e-09 63.9 93 37.6
Nitab4.5_0002046g0020 Nicotiana tabacum HOM05D002346 ORTHO05D002452 1.6e-08 63.2 91 39.6
Peaxi162Scf00314g00330 Petunia axillaris HOM05D002346 ORTHO05D002452 1.6e-08 63.2 113 39.8
Potri.015G035800 Populus trichocarpa HOM05D002346 ORTHO05D002452 1.6e-08 63.2 109 38.5
Gorai.002G173700 Gossypium raimondii HOM05D002346 ORTHO05D002452 2.1e-08 62.8 146 29.5
Lalb_Chr05g0222291 Lupinus albus HOM05D002346 ORTHO05D002452 2.1e-08 62.8 94 36.2
VMungo1215G2182 Vigna mungo HOM05D002346 ORTHO05D002452 2.1e-08 62.8 126 31.7
CiPaw.16G096500 Carya illinoinensis HOM05D002346 ORTHO05D002452 2.8e-08 62.4 114 35.1
Gohir.D01G141300 Gossypium hirsutum HOM05D002346 ORTHO05D002452 3.6e-08 62.0 146 29.5
Nitab4.5_0001264g0110 Nicotiana tabacum HOM05D002346 ORTHO05D002452 3.6e-08 62.0 101 37.6
CAN.G574.56 Capsicum annuum HOM05D002346 ORTHO05D002452 4.7e-08 61.6 114 35.1
PGR083G1816 Punica granatum HOM05D002346 ORTHO05D002452 1.0e-07 60.5 106 33.0
Duzib248G1422 Durio zibethinus HOM05D002346 ORTHO05D002452 3.0e-07 58.9 113 34.5
Phvul.002G319600 Phaseolus vulgaris HOM05D002346 ORTHO05D002452 3.0e-07 58.9 152 27.6
Cpa.g.sc2.215 Carica papaya HOM05D002346 ORTHO05D002452 4.0e-07 58.5 88 38.6
COL.COLO4_13078 Corchorus olitorius HOM05D002346 ORTHO05D002452 5.2e-07 58.2 112 34.8
Peaxi162Scf00376g00327 Petunia axillaris HOM05D002346 ORTHO05D002452 8.9e-07 57.4 64 43.8
PGSC0003DMG400032119 Solanum tuberosum HOM05D002346 ORTHO05D002452 8.9e-07 57.4 71 40.8
CsaV3_5G037080 Cucumis sativus L. HOM05D002346 ORTHO05D002452 1.5e-06 56.6 101 37.6
MELO3C015030.2 Cucumis melo HOM05D002346 ORTHO05D002452 2.6e-06 55.8 101 37.6
Glyma.08G043000 Glycine max HOM05D002346 ORTHO05D002452 2.6e-06 55.8 156 27.6
Nitab4.5_0011970g0020 Nicotiana tabacum HOM05D002346 ORTHO05D002452 3.4e-06 55.5 102 34.3
Medtr1g031930 Medicago truncatula HOM05D002346 ORTHO05D002452 4.4e-06 55.1 93 31.2
Glyma.05G235500 Glycine max HOM05D002346 ORTHO05D002452 7.5e-06 54.3 156 26.3


User provided reference genes

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