Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0851 Trochodendron aralioides HOM05D006751 ORTHO05D008710 2.6e-183 645.2 317 100.0
TAR636G1901 Trochodendron aralioides HOM05D006751 ORTHO05D008710 9.2e-112 407.5 362 61.9
Cfa010403 Carpinus fangiana HOM05D006751 ORTHO05D008710 1.1e-83 314.3 438 42.7
Duzib133G0478 Durio zibethinus HOM05D006751 ORTHO05D008710 3.4e-82 309.3 427 41.7
Thecc.01G216600 Theobroma cacao HOM05D006751 ORTHO05D008710 4.6e-79 298.9 427 41.9
Manes.12G049300 Manihot esculenta HOM05D006751 ORTHO05D008710 1.5e-77 293.9 429 41.0
QL09p049892 Quercus lobata HOM05D006751 ORTHO05D008710 5.6e-77 292.0 436 40.1
CiPaw.13G050300 Carya illinoinensis HOM05D006751 ORTHO05D008710 6.9e-75 285.0 440 40.2
Dinv28842 Davidia involucrata HOM05D006751 ORTHO05D008710 2.0e-74 283.5 380 44.5
vmacro14722 Vaccinium macrocarpon HOM05D006751 ORTHO05D008710 2.5e-72 276.6 452 39.2
Hma1.2p1_0149F.1_g066540 Hydrangea macrophylla HOM05D006751 ORTHO05D008710 1.6e-71 273.9 391 43.0
Thecc.01G216700 Theobroma cacao HOM05D006751 ORTHO05D008710 3.5e-71 272.7 406 40.9
Gohir.D11G146600 Gossypium hirsutum HOM05D006751 ORTHO05D008710 8.7e-70 268.1 422 40.3
COL.COLO4_16111 Corchorus olitorius HOM05D006751 ORTHO05D008710 1.9e-69 266.9 434 38.9
Gorai.007G157000 Gossypium raimondii HOM05D006751 ORTHO05D008710 1.9e-69 266.9 428 40.2
Nn1g08194 Nelumbo nucifera HOM05D006751 ORTHO05D008710 8.2e-68 261.5 367 40.9
GSVIVG01004748001 Vitis vinifera HOM05D006751 ORTHO05D008710 1.1e-67 261.2 367 40.6
Ciclev10020463m.g Citrus clementina HOM05D006751 ORTHO05D008710 2.0e-66 256.9 427 37.5
Actinidia09459 Actinidia chinensis HOM05D006751 ORTHO05D008710 3.4e-66 256.1 340 43.5
TWI18G0571 Tripterygium wilfordii HOM05D006751 ORTHO05D008710 4.5e-66 255.8 450 37.6
Rhsim01G0251000 Rhododendron simsii HOM05D006751 ORTHO05D008710 5.9e-66 255.4 379 41.2
Eucgr.H00756 Eucalyptus grandis HOM05D006751 ORTHO05D008710 2.2e-65 253.4 436 37.8
Hund18452 Selenicereus undatus HOM05D006751 ORTHO05D008710 1.1e-64 251.1 349 43.0
Sed0014566 Sechium edule HOM05D006751 ORTHO05D008710 4.2e-64 249.2 430 36.3
PSO017G4001 Papaver somniferum HOM05D006751 ORTHO05D008710 7.2e-64 248.4 414 38.2
ClCG09G008710 Citrullus lanatus HOM05D006751 ORTHO05D008710 4.6e-63 245.7 436 36.2
Cc01_g16530 Coffea canephora HOM05D006751 ORTHO05D008710 7.9e-63 245.0 430 36.5
AUR62001149 Chenopodium quinoa HOM05D006751 ORTHO05D008710 6.7e-62 241.9 418 37.3
PSO063G4788 Papaver somniferum HOM05D006751 ORTHO05D008710 3.3e-61 239.6 375 39.2
AUR62016527 Chenopodium quinoa HOM05D006751 ORTHO05D008710 1.3e-60 237.7 427 37.5
Atru.chr6.1446 Acer truncatum HOM05D006751 ORTHO05D008710 8.2e-60 235.0 366 38.0
CsaV3_7G026250 Cucumis sativus L. HOM05D006751 ORTHO05D008710 2.4e-59 233.4 392 37.2
Prupe.8G196400 Prunus persica HOM05D006751 ORTHO05D008710 1.5e-58 230.7 394 36.8
PGR083G0288 Punica granatum HOM05D006751 ORTHO05D008710 2.0e-58 230.3 427 35.6
Haze_03352 Corylus avellana HOM05D006751 ORTHO05D008710 4.5e-58 229.2 230 49.1
EL10Ac7g17934 Beta vulgaris HOM05D006751 ORTHO05D008710 1.0e-57 228.0 420 35.2
Sc17g0001950 Simmondsia chinensis HOM05D006751 ORTHO05D009307 1.0e-57 228.0 355 39.4
Cpa.g.sc8.122 Carica papaya HOM05D006751 ORTHO05D008710 2.2e-57 226.9 343 39.7
Potri.002G247400 Populus trichocarpa HOM05D006751 ORTHO05D008710 2.2e-57 226.9 397 37.3
MD05G1169200 Malus domestica HOM05D006751 ORTHO05D008710 6.5e-57 225.3 394 37.8
Hund05587 Selenicereus undatus HOM05D006751 ORTHO05D008710 2.5e-56 223.4 433 36.5
Lsat_1_v5_gn_9_17301 Lactuca sativa HOM05D006751 ORTHO05D008710 2.7e-55 219.9 362 37.8
MD10G1157500 Malus domestica HOM05D006751 ORTHO05D008710 2.7e-55 219.9 394 37.6
Aqoxy2G03936 Aquilegia oxysepala HOM05D006751 ORTHO05D008710 1.0e-54 218.0 385 35.6
DCAR_012676 Daucus carota HOM05D006751 ORTHO05D008710 3.9e-54 216.1 399 36.1
Glyma.18G158800 Glycine max HOM05D006751 ORTHO05D008710 5.1e-54 215.7 433 34.9
Ca_07507_v3 Cicer arietinum L. HOM05D006751 ORTHO05D008710 8.8e-54 214.9 454 32.6
Oeu003263.2 Olea europaea HOM05D006751 ORTHO05D008710 2.6e-53 213.4 438 34.7
RcHm_v2.0_Chr6g0283741 Rosa chinensis HOM05D006751 ORTHO05D008710 9.7e-53 211.5 393 36.9
FAN27G0294 Fragaria x ananassa HOM05D006751 ORTHO05D008710 1.3e-52 211.1 342 39.2
Solyc06g083220.3 Solanum lycopersicum HOM05D006751 ORTHO05D008710 1.3e-52 211.1 432 35.4
Lj1g0007193 Lotus japonicus HOM05D006751 ORTHO05D008710 2.2e-52 210.3 374 35.3
Sopen06g034610 Solanum pennellii HOM05D006751 ORTHO05D008710 2.2e-52 210.3 429 35.2
MBI16_g06251_MAGBIO Magnolia biondii HOM05D006751 ORTHO05D008710 2.8e-52 209.9 341 38.7
Atru.chr6.1445 Acer truncatum HOM05D006751 ORTHO05D008710 6.3e-52 208.8 306 39.5
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 2.4e-51 206.8 418 35.4
arahy.Tifrunner.gnm1.ann1.5UHD3M Arachis hypogaea HOM05D006751 ORTHO05D008710 5.3e-51 205.7 445 32.6
HanXRQChr07g0193061 Helianthus annuus HOM05D006751 ORTHO05D008710 5.3e-51 205.7 326 36.8
TPR.G28325 Trifolium pratense HOM05D006751 ORTHO05D008710 5.3e-51 205.7 380 34.7
FvH4_2g18360 Fragaria vesca HOM05D006751 ORTHO05D008710 1.2e-50 204.5 394 35.5
PGSC0003DMG400020172 Solanum tuberosum HOM05D006751 ORTHO05D008710 1.5e-50 204.1 368 37.8
FvH4_2g18361 Fragaria vesca HOM05D006751 ORTHO05D008710 2.6e-50 203.4 331 38.4
FAN15G3221 Fragaria x ananassa HOM05D006751 ORTHO05D008710 2.6e-50 203.4 332 38.3
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 4.5e-50 202.6 368 37.0
Nitab4.5_0003020g0170 Nicotiana tabacum HOM05D006751 ORTHO05D008710 1.1e-48 198.0 311 39.5
Peaxi162Scf01312g00068 Petunia axillaris HOM05D006751 ORTHO05D008710 1.9e-48 197.2 302 39.4
Actinidia23767 Actinidia chinensis HOM05D006751 ORTHO05D008710 3.2e-48 196.4 317 40.1
Medtr7g055720 Medicago truncatula HOM05D006751 ORTHO05D008710 9.4e-48 194.9 396 34.1
arahy.Tifrunner.gnm1.ann1.HN87AT Arachis hypogaea HOM05D006751 ORTHO05D008710 1.2e-47 194.5 473 30.9
Medtr7g055730 Medicago truncatula HOM05D006751 ORTHO05D008710 2.1e-47 193.7 401 33.2
Phvul.008G132700 Phaseolus vulgaris HOM05D006751 ORTHO05D008710 6.1e-47 192.2 332 33.7
Migut.O00924 Erythranthe guttata HOM05D006751 ORTHO05D008710 2.3e-46 190.3 416 33.2
AL9U11370 Arabidopsis lyrata HOM05D006751 ORTHO05D008710 8.8e-46 188.3 401 34.2
MELO3C021072.2 Cucumis melo HOM05D006751 ORTHO05D008710 3.3e-45 186.4 344 36.3
Gohir.A11G140300 Gossypium hirsutum HOM05D006751 ORTHO05D008710 2.8e-44 183.3 285 39.6
FAN27G0238 Fragaria x ananassa HOM05D006751 ORTHO05D009307 4.1e-43 179.5 291 39.5
Peaxi162Scf01312g00069 Petunia axillaris HOM05D006751 ORTHO05D008710 9.1e-43 178.3 368 34.5
THA.LOC104821658 Tarenaya hassleriana HOM05D006751 ORTHO05D008710 7.7e-42 175.3 417 29.5
AT4G13030 Arabidopsis thaliana HOM05D006751 ORTHO05D008710 1.3e-41 174.5 376 34.0
CARHR218330 Cardamine hirsuta HOM05D006751 ORTHO05D008710 1.7e-41 174.1 362 33.7
Sabra02G0188300 Salix brachista HOM05D006751 ORTHO05D008710 2.2e-41 173.7 451 31.5
Oeu041603.1 Olea europaea HOM05D006751 ORTHO05D008710 6.5e-41 172.2 297 35.4
Sp7g10140 Schrenkiella parvula HOM05D006751 ORTHO05D008710 1.1e-40 171.4 310 35.2
VMungo1383G3158 Vigna mungo HOM05D006751 ORTHO05D008710 3.2e-40 169.9 381 32.8
Aa31LG9G5060 Aethionema arabicum HOM05D006751 ORTHO05D008710 4.2e-40 169.5 291 35.1
BcaB04g17726 Brassica carinata HOM05D006751 ORTHO05D008710 4.2e-40 169.5 332 32.2
Migut.D02514 Erythranthe guttata HOM05D006751 ORTHO05D008710 7.2e-40 168.7 364 32.1
CSS0035402 Camellia sinensis var. sinensis HOM05D006751 ORTHO05D008710 1.6e-39 167.5 128 60.2
BcaC07g37406 Brassica carinata HOM05D006751 ORTHO05D008710 2.7e-39 166.8 374 31.8
A08p07190 Brassica napus HOM05D006751 ORTHO05D008710 2.7e-39 166.8 374 31.6
C08p08830 Brassica napus HOM05D006751 ORTHO05D008710 2.7e-39 166.8 374 31.8
BolC8t47729H Brassica oleracea HOM05D006751 ORTHO05D008710 2.7e-39 166.8 374 31.8
BraA08t32731Z Brassica rapa HOM05D006751 ORTHO05D008710 2.7e-39 166.8 374 31.6
MSTRG.18827 Avicennia marina HOM05D006751 ORTHO05D008710 1.8e-38 164.1 342 33.6
TPR.G29151 Trifolium pratense HOM05D006751 ORTHO05D008710 3.0e-38 163.3 348 33.6
unitig_37.g12882 Utricularia gibba HOM05D006751 ORTHO05D008710 4.0e-38 162.9 340 33.2
FAN24G0495 Fragaria x ananassa HOM05D006751 ORTHO05D008710 5.2e-38 162.5 389 31.6
SEGI_02078 Sequoiadendron giganteum HOM05D006751 ORTHO05D008710 5.3e-35 152.5 362 27.9
HPP92_016887 Vanilla planifolia HOM05D006751 ORTHO05D008710 5.9e-34 149.1 285 31.6
HanXRQChr10g0316091 Helianthus annuus HOM05D006751 ORTHO05D008710 2.8e-28 130.2 127 49.6
EL10Ac5g11653 Beta vulgaris HOM05D006751 ORTHO05D008710 1.3e-25 121.3 322 29.5
Lalb_Chr03g0041361 Lupinus albus HOM05D006751 ORTHO05D008710 3.8e-25 119.8 229 34.1
Os05g0274300 Oryza sativa ssp. japonica HOM05D006751 ORTHO05D008710 5.0e-25 119.4 275 31.3
Pp3c21_18970 Physcomitrium patens HOM05D006751 ORTHO05D008710 1.6e-23 114.4 339 27.4
Psat3g149800 Pisum sativum HOM05D006751 ORTHO05D008710 9.2e-19 98.6 154 39.0
ATR0681G155 Amborella trichopoda HOM05D006751 ORTHO05D008710 2.7e-18 97.1 102 47.1
Migut.D02513 Erythranthe guttata HOM05D006751 ORTHO05D008710 3.5e-18 96.7 156 42.9
Zm00001eb261870 Zea mays HOM05D006751 ORTHO05D008710 2.9e-17 93.6 99 46.5
Carub.0007s2974 Capsella rubella HOM05D006751 ORTHO05D008710 1.2e-13 81.6 99 47.5
Aa31LG9G9530 Aethionema arabicum HOM05D006751 ORTHO05D008710 1.3e-12 78.2 71 53.5
Actinidia21015 Actinidia chinensis HOM05D007689 ORTHO05D009701 1.8e-11 74.3 221 23.1
Sc17g0001960 Simmondsia chinensis HOM05D006751 ORTHO05D008710 2.7e-10 70.5 52 63.5
Zm00001eb318450 Zea mays HOM05D006751 ORTHO05D008710 1.1e-08 65.1 70 48.6
HanXRQChr02g0049031 Helianthus annuus HOM05D007689 ORTHO05D009701 1.5e-08 64.7 293 20.8
Ciclev10020446m.g Citrus clementina HOM05D007689 ORTHO05D009701 3.3e-08 63.5 308 21.8
Gohir.D07G131100 Gossypium hirsutum HOM05D007689 ORTHO05D009701 7.3e-08 62.4 291 21.6
Peaxi162Scf00102g00110 Petunia axillaris HOM05D007689 ORTHO05D009701 2.1e-07 60.8 290 19.7
HanXRQChr02g0049021 Helianthus annuus HOM05D007689 ORTHO05D009701 3.6e-07 60.1 339 19.2
Zm00001eb406270 Zea mays HOM05D006751 ORTHO05D008710 1.1e-06 58.5 50 56.0
Eucgr.K03520 Eucalyptus grandis HOM05D007689 ORTHO05D009701 1.4e-06 58.2 301 21.3
Actinidia40349 Actinidia chinensis HOM05D007689 ORTHO05D009701 2.3e-06 57.4 134 24.6
Nitab4.5_0001097g0080 Nicotiana tabacum HOM05D007689 ORTHO05D009701 4.0e-06 56.6 116 26.7
MSTRG.10131 Avicennia marina HOM05D007689 ORTHO05D009701 6.8e-06 55.8 108 28.7
TWI36G0491 Tripterygium wilfordii HOM05D007689 ORTHO05D009701 6.8e-06 55.8 52 44.2


User provided reference genes

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