Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0827 Trochodendron aralioides HOM05D005956 ORTHO05D007197 1.0e-219 766.9 534 100.0
PSO170G2336 Papaver somniferum HOM05D005956 ORTHO05D007197 5.8e-143 511.9 459 81.9
PSO063G0021 Papaver somniferum HOM05D005956 ORTHO05D007197 1.6e-140 503.8 478 81.2
CSS0010876 Camellia sinensis var. sinensis HOM05D005956 ORTHO05D007197 1.1e-133 481.1 460 79.6
CiPaw.01G207000 Carya illinoinensis HOM05D005956 ORTHO05D007197 6.5e-126 455.3 457 68.7
Duzib192G0068 Durio zibethinus HOM05D005956 ORTHO05D007197 3.2e-125 453.0 458 67.9
Actinidia21896 Actinidia chinensis HOM05D005956 ORTHO05D007197 4.2e-125 452.6 470 68.5
Thecc.06G054100 Theobroma cacao HOM05D005956 ORTHO05D007197 3.6e-124 449.5 458 69.2
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 2.6e-122 443.4 454 79.1
Rhsim08G0251500 Rhododendron simsii HOM05D005956 ORTHO05D007197 1.8e-120 437.2 458 77.5
Cfa003426 Carpinus fangiana HOM05D005956 ORTHO05D007197 2.4e-120 436.8 458 68.1
vmacro18734 Vaccinium macrocarpon HOM05D005956 ORTHO05D007197 3.1e-120 436.4 458 77.7
Atru.chr1.2600 Acer truncatum HOM05D005956 ORTHO05D007197 4.1e-120 436.0 451 68.1
MD17G1161200 Malus domestica HOM05D005956 ORTHO05D007197 1.3e-118 431.0 457 66.5
Sabra07G0001300 Salix brachista HOM05D005956 ORTHO05D007197 1.7e-118 430.6 468 65.0
TWI12G1352 Tripterygium wilfordii HOM05D005956 ORTHO05D007197 5.0e-118 429.1 459 67.1
QL07p046118 Quercus lobata HOM05D005956 ORTHO05D007197 9.4e-117 424.9 457 66.3
Manes.14G006900 Manihot esculenta HOM05D005956 ORTHO05D007197 1.6e-116 424.1 461 64.9
RcHm_v2.0_Chr2g0149071 Rosa chinensis HOM05D005956 ORTHO05D007197 3.0e-115 419.9 458 66.4
Nitab4.5_0000499g0110 Nicotiana tabacum HOM05D005956 ORTHO05D007197 5.2e-115 419.1 449 66.8
Migut.D02038 Erythranthe guttata HOM05D005956 ORTHO05D007197 6.3e-113 412.1 461 73.5
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 2.4e-112 410.2 462 64.9
ATR0626G219 Amborella trichopoda HOM05D005956 ORTHO05D007197 5.9e-111 405.6 458 73.8
Cpa.g.sc176.24 Carica papaya HOM05D005956 ORTHO05D007197 1.0e-110 404.8 476 63.2
Aa31LG4G2050 Aethionema arabicum HOM05D005956 ORTHO05D007197 1.7e-110 404.1 454 67.6
Potri.007G001800 Populus trichocarpa HOM05D005956 ORTHO05D007197 1.7e-110 404.1 469 64.0
Gorai.010G135000 Gossypium raimondii HOM05D005956 ORTHO05D007197 8.5e-110 401.7 459 63.8
PGR083G0114 Punica granatum HOM05D005956 ORTHO05D007197 1.1e-109 401.4 450 62.9
Oeu039938.1 Olea europaea HOM05D005956 ORTHO05D007197 2.5e-109 400.2 461 74.0
Eucgr.J03191 Eucalyptus grandis HOM05D005956 ORTHO05D007197 1.2e-108 397.9 456 62.9
MELO3C020528.2 Cucumis melo HOM05D005956 ORTHO05D007197 4.0e-107 392.9 477 60.8
BraA07t31918Z Brassica rapa HOM05D000309 ORTHO05D007197 6.7e-107 392.1 456 62.5
CAN.G790.4 Capsicum annuum HOM05D005956 ORTHO05D007197 1.5e-106 391.0 480 60.6
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 9.7e-106 388.3 457 66.7
Lsat_1_v5_gn_4_106240 Lactuca sativa HOM05D005956 ORTHO05D007197 1.3e-105 387.9 450 73.3
SGA_v2.0_scaffold115G32115 Striga asiatica HOM05D005956 ORTHO05D007197 8.3e-105 385.2 479 69.1
Nn2g12784 Nelumbo nucifera HOM05D005956 ORTHO05D007197 1.4e-104 384.4 458 64.2
AUR62000122 Chenopodium quinoa HOM05D005956 ORTHO05D007197 4.1e-104 382.9 460 61.1
HanXRQChr15g0497231 Helianthus annuus HOM05D005956 ORTHO05D007197 2.0e-103 380.6 451 71.2
Hma1.2p1_1111F.1_g258470 Hydrangea macrophylla HOM05D005956 ORTHO05D007197 1.5e-101 374.4 473 66.0
SGA_v2.0_scaffold69G23343 Striga asiatica HOM05D005956 ORTHO05D007197 1.5e-101 374.4 461 62.0
Haze_16217 Corylus avellana HOM05D005956 ORTHO05D007197 4.2e-101 372.9 610 51.1
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 5.5e-101 372.5 458 68.3
Ciclev10013933m.g Citrus clementina HOM05D005956 ORTHO05D007197 3.6e-100 369.8 451 62.3
SalBow8G3086 Salvia bowleyana HOM05D005956 ORTHO05D007197 6.1e-100 369.0 461 70.9
Ah.05g168390 Amaranthus hybridus HOM05D005956 ORTHO05D007197 8.0e-100 368.6 459 70.2
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 1.0e-99 368.2 462 61.3
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 1.4e-99 367.9 462 61.5
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 1.4e-99 367.9 462 61.5
Sopen03g041770 Solanum pennellii HOM05D005956 ORTHO05D007197 1.4e-99 367.9 460 61.7
CANSAT01G3224 Cannabis sativa HOM05D005956 ORTHO05D007197 1.8e-99 367.5 464 58.6
C06p52830 Brassica napus HOM05D000309 ORTHO05D007197 8.8e-99 365.2 455 66.8
A07p44100 Brassica napus HOM05D000309 ORTHO05D007197 2.6e-98 363.6 455 66.8
ClCG03G000530 Citrullus lanatus HOM05D005956 ORTHO05D007197 5.7e-98 362.5 448 60.7
Solyc03g124040.3 Solanum lycopersicum HOM05D005956 ORTHO05D007197 9.8e-98 361.7 460 60.9
BcaC08g47440 Brassica carinata HOM05D005956 ORTHO05D007197 2.8e-97 360.1 455 70.8
BolC6t40300H Brassica oleracea HOM05D000163 ORTHO05D000219 6.3e-97 359.0 455 70.5
Sp5g33970 Schrenkiella parvula HOM05D005956 ORTHO05D007197 8.3e-97 358.6 451 64.3
Dinv08767 Davidia involucrata HOM05D005956 ORTHO05D007197 1.1e-96 358.2 400 82.2
EL10Ac7g17213 Beta vulgaris HOM05D005956 ORTHO05D007197 4.1e-96 356.3 478 65.9
COL.COLO4_25126 Corchorus olitorius HOM05D005956 ORTHO05D007197 5.4e-96 355.9 458 59.2
Sed0023146 Sechium edule HOM05D005956 ORTHO05D007197 9.1e-96 355.1 469 57.4
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 2.0e-95 354.0 461 53.8
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 2.7e-95 353.6 461 53.8
Aqoxy7G02692 Aquilegia oxysepala HOM05D005956 ORTHO05D007197 3.5e-95 353.2 458 69.7
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 4.5e-95 352.8 461 54.2
PGSC0003DMG400009194 Solanum tuberosum HOM05D005956 ORTHO05D007197 2.9e-94 350.1 456 61.2
unitig_578.g15928 Utricularia gibba HOM05D005956 ORTHO05D007197 5.0e-94 349.4 450 56.4
AUR62019303 Chenopodium quinoa HOM05D005956 ORTHO05D007197 1.1e-93 348.2 495 55.2
VMungo1080G0145 Vigna mungo HOM05D005956 ORTHO05D007197 1.5e-93 347.8 463 53.1
BcaB03g16055 Brassica carinata HOM05D005956 ORTHO05D007197 3.3e-93 346.7 452 64.8
THA.LOC104812335 Tarenaya hassleriana HOM05D005956 ORTHO05D007197 5.5e-93 345.9 454 68.3
Peaxi162Scf00038g02615 Petunia axillaris HOM05D005956 ORTHO05D007197 9.5e-93 345.1 461 59.9
MBI16_g10330_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 3.6e-92 343.2 458 69.4
Sc05g0006980 Simmondsia chinensis HOM05D005956 ORTHO05D007197 2.3e-91 340.5 316 70.9
Lj7A719T46 Lonicera japonica HOM05D005956 ORTHO05D007197 2.6e-90 337.0 448 67.9
Hund05666 Selenicereus undatus HOM05D005956 ORTHO05D007197 4.4e-90 336.3 476 57.4
Carub.0002s2578 Capsella rubella HOM05D005956 ORTHO05D007197 4.9e-89 332.8 456 53.7
CsaV3_1G036410 Cucumis sativus L. HOM05D005956 ORTHO05D007197 1.8e-88 330.9 448 58.9
Gohir.D06G117400 Gossypium hirsutum HOM05D005956 ORTHO05D007197 8.0e-84 315.5 318 54.7
Glyma.15G000800 Glycine max HOM05D005956 ORTHO05D007197 5.4e-80 302.8 461 51.4
Prupe.3G025200 Prunus persica HOM05D005956 ORTHO05D007197 4.6e-79 299.7 280 57.9
FvH4_4g20560 Fragaria vesca HOM05D005956 ORTHO05D007197 6.6e-78 295.8 318 53.8
HPP92_000245 Vanilla planifolia HOM05D005956 ORTHO05D007197 6.6e-78 295.8 457 40.5
LjContig00482g0022414 Lotus japonicus HOM05D005956 ORTHO05D007197 1.1e-77 295.0 454 52.4
Atru.chr1.2601 Acer truncatum HOM05D005956 ORTHO05D007197 5.6e-77 292.7 308 53.9
CDE02G2643 Ceratophyllum demersum HOM05D005956 ORTHO05D007197 3.6e-76 290.0 306 52.9
AL2G39370 Arabidopsis lyrata HOM05D005956 ORTHO05D007197 6.2e-76 289.3 454 61.0
Lalb_Chr24g0392721 Lupinus albus HOM05D005956 ORTHO05D007197 1.4e-75 288.1 450 49.6
AT1G78930 Arabidopsis thaliana HOM05D005956 ORTHO05D007197 3.1e-75 287.0 454 59.7
Thhalv10018313m.g Eutrema salsugineum HOM05D005956 ORTHO05D007197 5.2e-75 286.2 454 60.6
Zm00001eb000010 Zea mays HOM05D005956 ORTHO05D007197 1.2e-74 285.0 473 59.4
Medtr6g003960 Medicago truncatula HOM05D005956 ORTHO05D007197 3.7e-73 280.0 461 47.9
TPR.G21350 Trifolium pratense HOM05D005956 ORTHO05D007197 1.4e-72 278.1 463 47.7
Phvul.005G185600 Phaseolus vulgaris HOM05D005956 ORTHO05D007197 5.1e-70 269.6 322 44.7
Ca_00996_v3 Cicer arietinum L. HOM05D005956 ORTHO05D007197 8.1e-68 262.3 465 49.2
Os09g0560100 Oryza sativa ssp. japonica HOM05D005956 ORTHO05D007197 8.1e-68 262.3 477 58.9
Psat5g306040 Pisum sativum HOM05D005956 ORTHO05D007197 5.2e-67 259.6 453 46.8
DCAR_030820 Daucus carota HOM05D005956 ORTHO05D007197 2.2e-65 254.2 455 51.0
MBI16_g00686_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 9.2e-64 248.8 323 81.4
Actinidia24382 Actinidia chinensis HOM05D005956 ORTHO05D007197 6.0e-63 246.1 369 61.5
Hma1.2p1_1111F.1_g258480 Hydrangea macrophylla HOM05D005956 ORTHO05D007197 7.8e-63 245.7 279 62.0
MBI16_g37212_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 3.3e-61 240.4 314 61.8
ECA233G3598 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-60 236.9 437 60.4
Zm00001eb320340 Zea mays HOM05D005956 ORTHO05D007197 7.8e-55 219.2 475 54.9
CARHR072540 Cardamine hirsuta HOM05D005956 ORTHO05D007197 1.3e-52 211.8 148 69.6
Gohir.A06G112700 Gossypium hirsutum HOM05D005956 ORTHO05D007197 8.4e-49 199.1 215 78.1
AagrBONN_evm.TU.Sc2ySwM_368.2861 Anthoceros agrestis HOM05D005956 ORTHO05D007197 2.4e-43 181.0 457 49.9
SGA_v2.0_scaffold115G32113 Striga asiatica HOM05D005956 ORTHO05D007197 2.0e-42 177.9 200 50.5
Mapoly0216s0005 Marchantia polymorpha HOM05D005956 ORTHO05D007197 3.7e-36 157.1 459 50.8
SEGI_03409 Sequoiadendron giganteum HOM05D005956 ORTHO05D007197 4.9e-33 146.7 148 52.7
SEGI_15409 Sequoiadendron giganteum HOM05D005956 ORTHO05D007197 4.9e-33 146.7 148 52.7
MD09G1167300 Malus domestica HOM05D005956 ORTHO05D007197 4.2e-32 143.7 133 60.9
Pp3c18_18510 Physcomitrium patens HOM05D005956 ORTHO05D007197 3.0e-30 137.5 437 36.4
HPP92_000192 Vanilla planifolia HOM05D005956 ORTHO05D007197 5.8e-26 123.2 177 37.9
Sc05g0006990 Simmondsia chinensis HOM05D005956 ORTHO05D007197 1.3e-25 122.1 69 78.3
MD09G1167200 Malus domestica HOM05D005956 ORTHO05D007197 3.2e-24 117.5 102 58.8
arahy.Tifrunner.gnm1.ann1.X8CU4B Arachis hypogaea HOM05D005956 ORTHO05D007197 1.8e-22 111.7 95 56.8
Nitab4.5_0005679g0020 Nicotiana tabacum HOM05D005956 ORTHO05D007197 5.1e-22 110.2 67 70.1
SGA_v2.0_scaffold1097G53840 Striga asiatica HOM05D005956 ORTHO05D007197 1.1e-21 109.0 79 63.3
Glyma.06G230200 Glycine max HOM05D005956 ORTHO05D007197 1.5e-21 108.6 74 67.6
Psat0s410g0120 Pisum sativum HOM05D005956 ORTHO05D007197 9.7e-21 105.9 76 64.5
arahy.Tifrunner.gnm1.ann1.DBZ4H1 Arachis hypogaea HOM05D005956 ORTHO05D007197 8.2e-20 102.8 93 58.1
Nitab4.5_0005679g0030 Nicotiana tabacum HOM05D005956 ORTHO05D007197 1.2e-18 99.0 72 70.8
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 6.5e-17 93.2 69 56.5
CBR_g20999 Chara braunii HOM05D005956 ORTHO05D001299 5.5e-16 90.1 142 33.8
HanXRQChr04g0125301 Helianthus annuus HOM05D005956 ORTHO05D007197 6.1e-15 86.7 59 62.7
arahy.Tifrunner.gnm1.ann1.85VD00 Arachis hypogaea HOM05D005956 ORTHO05D007197 7.9e-15 86.3 74 56.8
SEGI_36231 Sequoiadendron giganteum HOM05D005956 ORTHO05D007197 1.8e-14 85.1 177 39.5
SGA_v2.0_scaffold69G23347 Striga asiatica HOM05D005956 ORTHO05D007197 3.3e-13 80.9 299 47.2
arahy.Tifrunner.gnm1.ann1.X81K0T Arachis hypogaea HOM05D005956 ORTHO05D007197 1.5e-10 72.0 57 57.9
arahy.Tifrunner.gnm1.ann1.ZI8HJG Arachis hypogaea HOM05D005956 ORTHO05D007197 2.1e-07 61.6 62 50.0
Pp3c5_9520 Physcomitrium patens HOM05D005605 ORTHO05D001299 4.7e-07 60.5 58 39.7
Aqoxy6G01086 Aquilegia oxysepala HOM05D001557 ORTHO05D001299 7.9e-07 59.7 208 23.6
Ca_17273_v3 Cicer arietinum L. HOM05D002901 ORTHO05D003183 6.7e-06 56.6 56 39.3
Hma1.2p1_0276F.1_g111320 Hydrangea macrophylla HOM05D002901 ORTHO05D003183 6.7e-06 56.6 56 37.5
Lj4g0013449 Lotus japonicus HOM05D002901 ORTHO05D003183 6.7e-06 56.6 56 41.1
Pp3c3_15310 Physcomitrium patens HOM05D005605 ORTHO05D007615 6.7e-06 56.6 51 47.1
TPR.G34335 Trifolium pratense HOM05D002901 ORTHO05D003183 6.7e-06 56.6 56 39.3
ATR0564G510 Amborella trichopoda HOM05D000161 ORTHO05D000111 8.8e-06 56.2 81 38.3
Cfa018219 Carpinus fangiana HOM05D002901 ORTHO05D003183 8.8e-06 56.2 56 39.3
Haze_17884 Corylus avellana HOM05D002901 ORTHO05D003183 8.8e-06 56.2 56 39.3
Medtr1g115415 Medicago truncatula HOM05D002901 ORTHO05D003183 8.8e-06 56.2 56 41.1


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