Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0767 Trochodendron aralioides HOM05D004409 ORTHO05D005292 4.2e-43 177.6 86 100.0
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.7e-31 139.0 69 95.7
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 7.2e-19 97.1 66 66.7
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 8.0e-18 93.6 66 71.2
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 1.8e-17 92.4 65 63.1
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 6.8e-17 90.5 65 60.0
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.5e-16 89.4 64 60.9
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.3e-15 86.3 65 56.9
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.2e-15 85.5 65 58.5
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 2.8e-15 85.1 65 58.5
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 8.3e-15 83.6 62 62.9
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 1.4e-14 82.8 65 56.9
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 3.1e-14 81.6 65 53.8
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 4.1e-14 81.3 66 56.1
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 9.1e-14 80.1 67 53.7
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 9.1e-14 80.1 71 67.6
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 2.0e-13 79.0 65 55.4
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 2.0e-13 79.0 57 56.1
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.0e-13 79.0 65 55.4
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 3.5e-13 78.2 67 55.2
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 7.7e-13 77.0 60 56.7
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.3e-12 75.5 65 55.4
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.9e-12 75.1 59 57.6
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.9e-12 75.1 65 53.8
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 6.6e-12 73.9 66 47.0
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 8.6e-12 73.6 70 51.4
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 1.1e-11 73.2 61 57.4
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.1e-11 73.2 57 56.1
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.5e-11 72.8 63 55.6
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.5e-11 72.8 64 51.6
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 1.9e-11 72.4 69 60.9
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 1.9e-11 72.4 66 51.5
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 2.5e-11 72.0 56 53.6
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 3.3e-11 71.6 63 54.0
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 3.3e-11 71.6 54 53.7
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 3.3e-11 71.6 54 53.7
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 4.2e-11 71.2 67 53.7
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 4.2e-11 71.2 56 53.6
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 4.2e-11 71.2 56 53.6
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 2.1e-10 68.9 59 57.6
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.8e-10 68.6 69 47.8
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 3.6e-10 68.2 47 57.4
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 3.6e-10 68.2 67 52.2
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 4.7e-10 67.8 70 44.3
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 8.0e-10 67.0 65 47.7
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.4e-09 66.2 72 44.4
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 3.0e-09 65.1 66 53.0
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 3.0e-09 65.1 65 49.2
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 6.8e-09 63.9 57 47.4
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 6.8e-09 63.9 62 48.4
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 8.9e-09 63.5 54 51.9
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 8.9e-09 63.5 62 46.8
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 8.9e-09 63.5 62 46.8
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 2.0e-08 62.4 62 45.2
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 3.4e-08 61.6 42 64.3
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 3.4e-08 61.6 66 47.0
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 3.4e-08 61.6 40 65.0
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 3.4e-08 61.6 42 61.9
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 4.4e-08 61.2 67 44.8
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 7.5e-08 60.5 37 67.6
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 9.8e-08 60.1 55 50.9
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.3e-07 59.7 55 49.1
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 1.7e-07 59.3 59 40.7
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 1.7e-07 59.3 69 42.0
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 2.2e-07 58.9 54 42.6
FvH4_7g26400 Fragaria vesca HOM05D004409 ORTHO05D005292 2.2e-07 58.9 66 42.4
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.2e-07 58.9 66 42.4
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 2.8e-07 58.5 66 47.0
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 3.7e-07 58.2 61 47.5
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 3.7e-07 58.2 65 41.5
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 4.9e-07 57.8 64 46.9
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.9e-07 57.8 53 49.1
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 6.3e-07 57.4 57 49.1
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 6.3e-07 57.4 60 45.0
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 6.3e-07 57.4 66 40.9
MELO3C013895.2 Cucumis melo HOM05D004409 ORTHO05D005292 8.3e-07 57.0 65 44.6
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.3e-07 57.0 66 39.4
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 1.4e-06 56.2 71 40.8
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 1.8e-06 55.8 59 49.2
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 2.4e-06 55.5 69 42.0
ClCG10G002150 Citrullus lanatus HOM05D004409 ORTHO05D005292 3.1e-06 55.1 55 49.1
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 3.1e-06 55.1 58 46.6
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 4.1e-06 54.7 69 34.8
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.1e-06 54.7 42 52.4
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 7.0e-06 53.9 75 40.0
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.0e-06 53.9 67 38.8
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 9.2e-06 53.5 65 43.1
Thecc.07G180600 Theobroma cacao HOM05D004409 ORTHO05D005292 9.2e-06 53.5 67 37.3


User provided reference genes

Program Settings