Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 2.5e-87 325.5 175 100.0
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 1.2e-31 140.6 191 49.7
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 3.9e-27 125.6 233 42.1
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 8.9e-24 114.4 191 40.3
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 1.5e-23 113.6 230 40.9
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 7.5e-23 111.3 191 42.9
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 2.1e-20 103.2 190 39.5
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 2.1e-20 103.2 192 40.1
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 4.6e-20 102.1 206 40.8
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 6.0e-20 101.7 193 41.5
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 1.3e-19 100.5 187 44.9
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 5.1e-19 98.6 178 39.3
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 6.6e-19 98.2 184 41.3
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 3.3e-18 95.9 180 37.2
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 3.3e-18 95.9 209 38.3
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 9.5e-18 94.4 194 39.2
Oeu055231.1 Olea europaea HOM05D007526 ORTHO05D009350 2.8e-17 92.8 186 39.8
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 6.2e-17 91.7 189 39.2
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 8.1e-17 91.3 189 38.6
Manes.03G164000 Manihot esculenta HOM05D007526 ORTHO05D009350 3.1e-16 89.4 198 35.4
Glyma.10G180900 Glycine max HOM05D007526 ORTHO05D009350 4.0e-16 89.0 170 37.6
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 5.2e-16 88.6 193 39.4
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 1.2e-15 87.4 184 39.7
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 4.4e-15 85.5 191 37.2
Cc03_g05540 Coffea canephora HOM05D007526 ORTHO05D009350 5.8e-15 85.1 190 37.4
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 2.9e-14 82.8 191 35.1
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 6.4e-14 81.6 191 35.6
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 6.4e-14 81.6 191 35.6
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 6.4e-14 81.6 213 36.2
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 8.4e-14 81.3 181 37.6
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 1.4e-13 80.5 204 34.3
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 1.4e-13 80.5 187 35.8
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 1.9e-13 80.1 197 37.6
arahy.Tifrunner.gnm1.ann1.STCN49 Arachis hypogaea HOM05D007526 ORTHO05D009350 2.4e-13 79.7 191 30.9
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 3.2e-13 79.3 182 33.0
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 4.1e-13 79.0 213 34.3
arahy.Tifrunner.gnm1.ann1.582VFN Arachis hypogaea HOM05D007526 ORTHO05D009350 5.4e-13 78.6 191 30.4
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 5.4e-13 78.6 201 31.8
EL10Ac3g05005 Beta vulgaris HOM05D007526 ORTHO05D009350 9.2e-13 77.8 211 36.0
Sopen09g033060 Solanum pennellii HOM05D007526 ORTHO05D009350 9.2e-13 77.8 229 32.8
CDE02G1593 Ceratophyllum demersum HOM05D045424 ORTHO05D009350 1.2e-12 77.4 200 36.0
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 1.2e-12 77.4 200 31.0
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 1.2e-12 77.4 216 32.9
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.6e-12 77.0 186 37.1
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 2.1e-12 76.6 189 32.8
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 2.7e-12 76.3 216 31.5
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 2.7e-12 76.3 187 35.8
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 3.5e-12 75.9 183 36.6
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 4.6e-12 75.5 197 34.5
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 4.6e-12 75.5 196 33.7
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 7.8e-12 74.7 185 36.2
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 1.0e-11 74.3 200 33.5
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 1.7e-11 73.6 187 34.2
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 1.7e-11 73.6 192 37.0
Dinv27054 Davidia involucrata HOM05D007526 ORTHO05D009350 2.3e-11 73.2 78 55.1
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 2.3e-11 73.2 186 33.3
Ah.04g155760 Amaranthus hybridus HOM05D007526 ORTHO05D009350 3.9e-11 72.4 205 33.2
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 5.1e-11 72.0 204 31.9
VMungo0720G0856 Vigna mungo HOM05D007526 ORTHO05D009350 5.1e-11 72.0 229 31.0
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 6.6e-11 71.6 231 31.6
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 1.1e-10 70.9 189 32.8
QL06p018008 Quercus lobata HOM05D007526 ORTHO05D009350 1.9e-10 70.1 110 45.5
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 2.5e-10 69.7 194 33.5
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 4.3e-10 68.9 197 31.0
AUR62015571 Chenopodium quinoa HOM05D007526 ORTHO05D009350 5.6e-10 68.6 207 33.8
Psat6g104840 Pisum sativum HOM05D007526 ORTHO05D009350 5.6e-10 68.6 179 31.8
TPR.G25185 Trifolium pratense HOM05D007526 ORTHO05D009350 7.3e-10 68.2 190 28.9
Hma1.2p1_0267F.1_g107260 Hydrangea macrophylla HOM05D007526 ORTHO05D009350 9.6e-10 67.8 57 61.4
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 9.6e-10 67.8 184 33.7
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.2e-09 67.4 187 38.0
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 1.2e-09 67.4 204 36.8
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 1.2e-09 67.4 187 33.7
Phvul.007G273600 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 1.6e-09 67.0 241 27.8
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 1.6e-09 67.0 184 33.7
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 2.1e-09 66.6 172 34.9
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 3.6e-09 65.9 180 33.3
Actinidia01843 Actinidia chinensis HOM05D007526 ORTHO05D009350 1.4e-08 63.9 54 64.8
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.4e-08 63.9 189 32.8
Sed0008521 Sechium edule HOM05D007526 ORTHO05D009350 1.4e-08 63.9 199 28.6
Lj5g0022077 Lotus japonicus HOM05D007526 ORTHO05D009350 1.8e-08 63.5 193 29.5
AL7G41840 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 2.4e-08 63.2 192 28.1
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 2.4e-08 63.2 191 34.6
Thhalv10026764m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 2.4e-08 63.2 195 30.3
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.4e-08 63.2 179 33.5
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 2.4e-08 63.2 185 33.5
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 4.0e-08 62.4 202 33.7
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 5.2e-08 62.0 200 31.0
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 6.8e-08 61.6 192 32.3
Migut.G00517 Erythranthe guttata HOM05D007526 ORTHO05D009350 6.8e-08 61.6 101 41.6
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 6.8e-08 61.6 199 29.6
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 8.9e-08 61.2 198 32.3
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 8.9e-08 61.2 194 34.0
Medtr1g076110 Medicago truncatula HOM05D007526 ORTHO05D009350 1.2e-07 60.8 53 62.3
BraA04t16457Z Brassica rapa HOM05D007526 ORTHO05D009350 1.5e-07 60.5 194 28.4
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 1.5e-07 60.5 185 33.0
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 1.5e-07 60.5 185 31.4
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 1.5e-07 60.5 176 32.4
CANSAT78G2320 Cannabis sativa HOM05D007526 ORTHO05D009350 2.0e-07 60.1 224 29.5
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 2.6e-07 59.7 196 32.1
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 2.6e-07 59.7 184 32.1
COL.COLO4_15878 Corchorus olitorius HOM05D007526 ORTHO05D009350 3.4e-07 59.3 50 58.0
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 4.4e-07 58.9 206 29.6
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 5.8e-07 58.5 170 33.5
TPR.G1498 Trifolium pratense HOM05D007526 ORTHO05D009350 7.6e-07 58.2 177 33.9
Carub.0007s2786 Capsella rubella HOM05D007526 ORTHO05D009350 1.3e-06 57.4 70 47.1
ECA240G1530 Erigeron canadensis HOM05D064852 ORTHO05D009350 1.3e-06 57.4 180 32.8
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 1.3e-06 57.4 181 32.0
ATR0736G129 Amborella trichopoda HOM05D007526 ORTHO05D009350 1.7e-06 57.0 255 27.8
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 2.2e-06 56.6 169 30.8
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 2.2e-06 56.6 195 34.9
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 2.2e-06 56.6 195 34.4
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 2.2e-06 56.6 206 31.6
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 3.8e-06 55.8 195 33.3
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 3.8e-06 55.8 195 33.3
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 4.9e-06 55.5 205 32.7
BcaB02g08612 Brassica carinata HOM05D007526 ORTHO05D009350 8.4e-06 54.7 204 26.0
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 8.4e-06 54.7 181 31.5


User provided reference genes

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