Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0721 Trochodendron aralioides HOM05D002515 ORTHO05D002722 2.0e-41 171.8 75 100.0
TAR636G1413 Trochodendron aralioides HOM05D002515 ORTHO05D002722 4.8e-27 124.0 53 98.1
TAR633G1102 Trochodendron aralioides HOM05D002515 ORTHO05D002722 3.9e-21 104.4 65 69.2
Cfa011498 Carpinus fangiana HOM05D002515 ORTHO05D006653 9.1e-18 93.2 63 60.3
Dinv35606 Davidia involucrata HOM05D002515 ORTHO05D002722 5.9e-17 90.5 54 64.8
Dinv16998 Davidia involucrata HOM05D002515 ORTHO05D002722 2.5e-15 85.1 55 67.3
Dinv43153 Davidia involucrata HOM05D002515 ORTHO05D002722 2.5e-15 85.1 55 67.3
Actinidia13143 Actinidia chinensis HOM05D002515 ORTHO05D002722 8.0e-14 80.1 56 57.1
GSVIVG01024972001 Vitis vinifera HOM05D002515 ORTHO05D002722 2.3e-13 78.6 52 61.5
Haze_24092 Corylus avellana HOM05D002515 ORTHO05D002722 4.0e-13 77.8 51 60.8
Actinidia05311 Actinidia chinensis HOM05D002515 ORTHO05D002722 5.2e-13 77.4 66 51.5
Rhsim04G0156800 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.5e-12 75.9 55 54.5
Rhsim04G0157000 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.5e-12 75.9 55 54.5
Actinidia37204 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.0e-12 75.5 66 50.0
CiPaw.13G094800 Carya illinoinensis HOM05D002515 ORTHO05D002722 2.0e-12 75.5 53 60.4
Actinidia07036 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.6e-12 75.1 53 60.4
QL01p032098 Quercus lobata HOM05D002515 ORTHO05D002722 3.4e-12 74.7 48 62.5
TWI74G1566 Tripterygium wilfordii HOM05D002515 ORTHO05D002722 1.3e-11 72.8 55 49.1
vmacro03074 Vaccinium macrocarpon HOM05D002515 ORTHO05D002722 1.7e-11 72.4 55 56.4
Prupe.6G078200 Prunus persica HOM05D002515 ORTHO05D002722 2.2e-11 72.0 50 58.0
PGR004G0883 Punica granatum HOM05D002515 ORTHO05D002722 2.2e-11 72.0 52 51.9
CSS0045597 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 8.3e-11 70.1 55 54.5
MELO3C025918.2 Cucumis melo HOM05D002515 ORTHO05D002722 1.1e-10 69.7 46 56.5
Ah.15g097300 Amaranthus hybridus HOM05D002515 ORTHO05D002722 1.4e-10 69.3 46 54.3
CsaV3_6G016870 Cucumis sativus L. HOM05D002515 ORTHO05D002722 1.4e-10 69.3 46 56.5
Potri.001G239500 Populus trichocarpa HOM05D002515 ORTHO05D002722 1.4e-10 69.3 51 56.9
Rhsim13G0082900 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.4e-10 69.3 55 52.7
TWI79G0006 Tripterygium wilfordii HOM05D002515 ORTHO05D002722 2.4e-10 68.6 53 50.9
Aqoxy4G02918 Aquilegia oxysepala HOM05D002515 ORTHO05D002722 3.1e-10 68.2 52 55.8
AUR62009577 Chenopodium quinoa HOM05D002515 ORTHO05D002722 4.1e-10 67.8 46 54.3
ClCG02G020160 Citrullus lanatus HOM05D002515 ORTHO05D002722 4.1e-10 67.8 54 51.9
Potri.016G095500 Populus trichocarpa HOM05D002515 ORTHO05D002722 4.1e-10 67.8 52 51.9
Thecc.09G300700 Theobroma cacao HOM05D002515 ORTHO05D002722 4.1e-10 67.8 51 52.9
Duzib168G0968 Durio zibethinus HOM05D002515 ORTHO05D002722 5.3e-10 67.4 51 51.0
MELO3C008878.2 Cucumis melo HOM05D002515 ORTHO05D002722 7.0e-10 67.0 54 51.9
CsaV3_4G031780 Cucumis sativus L. HOM05D002515 ORTHO05D002722 7.0e-10 67.0 54 51.9
CSS0008176 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 9.1e-10 66.6 55 50.9
CSS0029440 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 9.1e-10 66.6 55 50.9
CSS0041206 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 9.1e-10 66.6 55 50.9
ClCG04G004860 Citrullus lanatus HOM05D002515 ORTHO05D002722 9.1e-10 66.6 46 52.2
Ciclev10013810m.g Citrus clementina HOM05D002515 ORTHO05D002722 9.1e-10 66.6 56 48.2
PSO339G4477 Papaver somniferum HOM05D002515 ORTHO05D002722 9.1e-10 66.6 54 53.7
CSS0048347 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.2e-09 66.2 55 50.9
MBI14_g20110_MAGBIO Magnolia biondii HOM05D002515 ORTHO05D002722 1.2e-09 66.2 61 45.9
FAN25G0844 Fragaria x ananassa HOM05D002515 ORTHO05D002722 1.6e-09 65.9 50 52.0
MD04G1128800 Malus domestica HOM05D002515 ORTHO05D002722 1.6e-09 65.9 55 50.9
Duzib150G0343 Durio zibethinus HOM05D002515 ORTHO05D002722 2.0e-09 65.5 52 50.0
Nn2g10370 Nelumbo nucifera HOM05D002515 ORTHO05D002722 2.0e-09 65.5 76 42.1
Potri.009G030700 Populus trichocarpa HOM05D002515 ORTHO05D002722 2.0e-09 65.5 47 57.4
Gohir.A05G095700 Gossypium hirsutum HOM05D002515 ORTHO05D002722 3.5e-09 64.7 52 48.1
EL10Ac7g16016 Beta vulgaris HOM05D002515 ORTHO05D002722 4.5e-09 64.3 46 52.2
Sabra16G0144400 Salix brachista HOM05D002515 ORTHO05D002722 4.5e-09 64.3 51 54.9
CSS0017977 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.9e-09 63.9 52 51.9
CSS0034492 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.9e-09 63.9 55 49.1
AUR62001789 Chenopodium quinoa HOM05D002515 ORTHO05D002722 5.9e-09 63.9 46 52.2
FAN11G3380 Fragaria x ananassa HOM05D002515 ORTHO05D002722 5.9e-09 63.9 50 50.0
Manes.04G034800 Manihot esculenta HOM05D002515 ORTHO05D002722 5.9e-09 63.9 52 44.2
Ciclev10027797m.g Citrus clementina HOM05D002515 ORTHO05D002722 7.7e-09 63.5 52 51.9
FAN21G0377 Fragaria x ananassa HOM05D002515 ORTHO05D006653 7.7e-09 63.5 50 50.0
CSS0020060 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.0e-08 63.2 61 45.9
CSS0030774 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.0e-08 63.2 61 45.9
Cpa.g.sc81.155 Carica papaya HOM05D002515 ORTHO05D002722 1.0e-08 63.2 51 51.0
FvH4_3g36010 Fragaria vesca HOM05D002515 ORTHO05D002722 1.0e-08 63.2 50 50.0
arahy.Tifrunner.gnm1.ann1.T3EUR0 Arachis hypogaea HOM05D002515 ORTHO05D002722 1.3e-08 62.8 77 35.1
CSS0024264 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.3e-08 62.8 52 51.9
Duzib093G1384 Durio zibethinus HOM05D002515 ORTHO05D002722 1.3e-08 62.8 75 32.0
Gohir.D05G096000 Gossypium hirsutum HOM05D002515 ORTHO05D002722 1.7e-08 62.4 52 46.2
Gorai.009G099300 Gossypium raimondii HOM05D002515 ORTHO05D002722 1.7e-08 62.4 52 46.2
MD11G1109700 Malus domestica HOM05D002515 ORTHO05D002722 1.7e-08 62.4 50 52.0
FAN16G3741 Fragaria x ananassa HOM05D002515 ORTHO05D002722 3.8e-08 61.2 50 48.0
Oeu036148.1 Olea europaea HOM05D002515 ORTHO05D002722 3.8e-08 61.2 52 44.2
Medtr1g047660 Medicago truncatula HOM05D002515 ORTHO05D002722 5.0e-08 60.8 77 35.1
Prupe.6G254700 Prunus persica HOM05D002515 ORTHO05D002722 6.5e-08 60.5 55 47.3
Cpa.g.sc228.13 Carica papaya HOM05D003688 ORTHO05D004338 8.5e-08 60.1 53 47.2
Atru.chr8.1972 Acer truncatum HOM05D002515 ORTHO05D002722 1.5e-07 59.3 57 45.6
CSS0015566 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.5e-07 59.3 52 48.1
Duzib128G0266 Durio zibethinus HOM05D002515 ORTHO05D002722 1.5e-07 59.3 57 42.1
Thecc.09G322100 Theobroma cacao HOM05D002515 ORTHO05D002722 1.5e-07 59.3 52 48.1
Lalb_Chr03g0036731 Lupinus albus HOM05D002515 ORTHO05D002722 1.9e-07 58.9 50 50.0
MD12G1141400 Malus domestica HOM05D002515 ORTHO05D002722 1.9e-07 58.9 59 44.1
CANSAT54G1460 Cannabis sativa HOM05D002515 ORTHO05D002722 2.5e-07 58.5 50 48.0
SalBow3G0449 Salvia bowleyana HOM05D002515 ORTHO05D002722 2.5e-07 58.5 45 53.3
Manes.11G128400 Manihot esculenta HOM05D002515 ORTHO05D002722 3.2e-07 58.2 52 44.2
ATR0559G060 Amborella trichopoda HOM05D002515 ORTHO05D002722 5.5e-07 57.4 66 37.9
ECA236G1034 Erigeron canadensis HOM05D002515 ORTHO05D005057 7.2e-07 57.0 70 37.1
Nitab4.5_0000216g0300 Nicotiana tabacum HOM05D002515 ORTHO05D002722 9.4e-07 56.6 53 47.2
Peaxi162Scf00094g00141 Petunia axillaris HOM05D002515 ORTHO05D002722 1.2e-06 56.2 56 44.6
Lalb_Chr24g0394151 Lupinus albus HOM05D002515 ORTHO05D002722 1.6e-06 55.8 45 53.3
ATR0680G229 Amborella trichopoda HOM05D002082 ORTHO05D002130 2.1e-06 55.5 50 38.0
Cc06_g02660 Coffea canephora HOM05D002515 ORTHO05D002722 2.1e-06 55.5 52 42.3
Glyma.15G038400 Glycine max HOM05D002515 ORTHO05D002722 2.1e-06 55.5 53 50.9
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 2.7e-06 55.1 50 46.0
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 2.7e-06 55.1 50 46.0
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 2.7e-06 55.1 50 46.0
Migut.D02105 Erythranthe guttata HOM05D002515 ORTHO05D002722 2.7e-06 55.1 60 38.3
Glyma.13G335900 Glycine max HOM05D002515 ORTHO05D002722 2.7e-06 55.1 46 52.2
Phvul.007G107700 Phaseolus vulgaris HOM05D002515 ORTHO05D002722 2.7e-06 55.1 34 58.8
COL.COLO4_18507 Corchorus olitorius HOM05D002515 ORTHO05D002722 3.6e-06 54.7 58 48.3
Hund18912 Selenicereus undatus HOM05D002515 ORTHO05D002722 3.6e-06 54.7 41 46.3
VMungo0331G0247 Vigna mungo HOM05D002082 ORTHO05D002130 3.6e-06 54.7 64 39.1
Atru.chr3.3898 Acer truncatum HOM05D002515 ORTHO05D002722 8.0e-06 53.5 32 65.6
Gohir.A03G042033 Gossypium hirsutum HOM05D002515 ORTHO05D002722 8.0e-06 53.5 43 55.8


User provided reference genes

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