Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.2e-73 279.6 130 100.0
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 5.0e-40 167.9 108 70.4
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 2.7e-33 145.6 104 61.5
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 1.7e-32 142.9 112 58.9
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 3.9e-32 141.7 111 59.5
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 1.5e-31 139.8 105 59.0
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.5e-31 139.0 105 61.0
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 3.3e-31 138.7 77 71.4
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 4.3e-31 138.3 98 61.2
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 4.3e-31 138.3 109 57.8
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 9.5e-31 137.1 105 58.1
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 1.6e-30 136.3 108 57.4
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.6e-30 136.3 105 60.0
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.6e-30 136.3 105 60.0
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 2.1e-30 136.0 96 59.4
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 2.8e-30 135.6 116 58.6
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 3.6e-30 135.2 88 67.0
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 4.7e-30 134.8 109 53.2
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 6.2e-30 134.4 116 57.8
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 6.2e-30 134.4 86 66.3
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 8.1e-30 134.0 108 57.4
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.1e-29 133.7 111 57.7
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 1.8e-29 132.9 111 55.9
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 2.3e-29 132.5 94 63.8
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 2.3e-29 132.5 86 61.6
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 2.3e-29 132.5 95 62.1
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 4.0e-29 131.7 78 67.9
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 4.0e-29 131.7 96 60.4
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 6.8e-29 131.0 87 63.2
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 6.8e-29 131.0 86 60.5
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 8.9e-29 130.6 84 64.3
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 1.2e-28 130.2 118 50.8
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 2.0e-28 129.4 89 61.8
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 2.6e-28 129.0 122 50.0
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 3.4e-28 128.6 71 71.8
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 3.4e-28 128.6 101 56.4
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 3.4e-28 128.6 122 52.5
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 4.4e-28 128.3 90 61.1
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 7.5e-28 127.5 122 50.8
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 7.5e-28 127.5 122 50.8
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 7.5e-28 127.5 122 50.8
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 9.9e-28 127.1 108 54.6
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 9.9e-28 127.1 69 68.1
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 1.3e-27 126.7 82 62.2
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.3e-27 126.7 128 44.5
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.7e-27 126.3 101 56.4
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.7e-27 126.3 122 50.8
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 2.2e-27 125.9 110 54.5
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 3.7e-27 125.2 94 58.5
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 4.9e-27 124.8 92 60.9
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 4.9e-27 124.8 111 50.5
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.4e-26 123.2 78 66.7
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 3.2e-26 122.1 73 64.4
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 4.1e-26 121.7 106 50.9
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 5.4e-26 121.3 90 60.0
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 7.1e-26 120.9 117 51.3
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 9.2e-26 120.6 72 68.1
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 1.2e-25 120.2 90 56.7
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 1.6e-25 119.8 73 63.0
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.6e-25 119.8 87 59.8
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 2.1e-25 119.4 104 51.9
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 6.0e-25 117.9 60 75.0
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.7e-24 116.3 82 56.1
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.7e-24 116.3 115 46.1
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.3e-24 115.9 90 58.9
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 8.6e-24 114.0 69 62.3
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 8.6e-24 114.0 61 72.1
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 3.3e-23 112.1 77 55.8
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 4.3e-23 111.7 92 54.3
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 2.1e-22 109.4 80 57.5
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 3.6e-22 108.6 92 54.3
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 1.8e-21 106.3 90 55.6
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 1.8e-21 106.3 109 48.6
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 2.4e-21 105.9 93 51.6
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 2.4e-21 105.9 92 53.3
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 4.0e-21 105.1 110 48.2
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 4.0e-21 105.1 91 56.0
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 4.0e-21 105.1 93 51.6
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 5.2e-21 104.8 91 53.8
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 5.2e-21 104.8 100 48.0
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 5.2e-21 104.8 59 67.8
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 6.8e-21 104.4 108 45.4
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.2e-20 103.6 97 50.5
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 2.6e-20 102.4 59 64.4
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 5.8e-20 101.3 92 51.1
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 6.4e-19 97.8 85 45.9
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 3.2e-18 95.5 90 50.0
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 5.4e-18 94.7 88 43.2
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 7.1e-18 94.4 81 59.3
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 9.2e-18 94.0 93 47.3
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 1.6e-17 93.2 81 50.6
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 6.0e-17 91.3 80 50.0
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 1.5e-15 86.7 70 51.4
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 1.9e-15 86.3 69 56.5
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 4.3e-15 85.1 128 40.6
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 9.6e-15 84.0 56 66.1
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 3.1e-13 79.0 88 44.3
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 2.1e-06 56.2 34 61.8


User provided reference genes

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