Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0622 Trochodendron aralioides HOM05D000248 ORTHO05D000146 1.6e-49 199.1 99 100.0
TAR636G3458 Trochodendron aralioides HOM05D000248 ORTHO05D000146 4.0e-37 157.9 96 81.2
TAR636G0783 Trochodendron aralioides HOM05D000248 ORTHO05D000146 3.1e-34 148.3 83 86.7
TAR636G2068 Trochodendron aralioides HOM05D000248 ORTHO05D000146 4.1e-34 147.9 98 78.6
TAR365G0442 Trochodendron aralioides HOM05D000248 ORTHO05D000146 9.9e-12 73.6 119 41.2
TAR365G0987 Trochodendron aralioides HOM05D000248 ORTHO05D000146 1.3e-11 73.2 102 42.2
TAR365G0542 Trochodendron aralioides HOM05D000248 ORTHO05D000146 3.7e-11 71.6 105 43.8
TAR365G0663 Trochodendron aralioides HOM05D000248 ORTHO05D000146 4.9e-11 71.2 121 39.7
TAR633G1009 Trochodendron aralioides HOM05D000248 ORTHO05D000146 2.4e-10 68.9 122 41.8
TAR636G3635 Trochodendron aralioides HOM05D000248 ORTHO05D000146 2.4e-10 68.9 139 36.7
Ciclev10003100m.g Citrus clementina HOM05D000248 ORTHO05D000146 4.1e-10 68.2 99 38.4
Ciclev10005670m.g Citrus clementina HOM05D000248 ORTHO05D000146 5.4e-10 67.8 99 40.4
Ciclev10002065m.g Citrus clementina HOM05D000248 ORTHO05D000146 9.2e-10 67.0 99 38.4
Ciclev10003813m.g Citrus clementina HOM05D000248 ORTHO05D000146 9.2e-10 67.0 99 39.4
TAR194G0003 Trochodendron aralioides HOM05D000248 ORTHO05D000146 9.2e-10 67.0 121 40.5
Ciclev10005617m.g Citrus clementina HOM05D000248 ORTHO05D000146 1.2e-09 66.6 99 39.4
TAR636G3681 Trochodendron aralioides HOM05D000248 ORTHO05D000146 1.6e-09 66.2 122 38.5
Ciclev10005659m.g Citrus clementina HOM05D000248 ORTHO05D000146 2.1e-09 65.9 99 40.4
Ciclev10005661m.g Citrus clementina HOM05D000248 ORTHO05D000146 2.1e-09 65.9 99 38.4
TAR103G0002 Trochodendron aralioides HOM05D000248 ORTHO05D000146 2.1e-09 65.9 99 42.4
QL09p029368 Quercus lobata HOM05D000248 ORTHO05D000146 7.8e-09 63.9 98 41.8
Dinv40367 Davidia involucrata HOM05D000248 ORTHO05D000146 1.7e-08 62.8 98 34.7
TAR633G1561 Trochodendron aralioides HOM05D000248 ORTHO05D000146 5.1e-08 61.2 118 40.7
Ciclev10005650m.g Citrus clementina HOM05D000248 ORTHO05D000146 6.6e-08 60.8 99 37.4
Ciclev10003607m.g Citrus clementina HOM05D000248 ORTHO05D000146 8.6e-08 60.5 99 37.4
Ciclev10005646m.g Citrus clementina HOM05D000248 ORTHO05D000146 8.6e-08 60.5 99 39.4
Eucgr.H00081 Eucalyptus grandis HOM05D000248 ORTHO05D000146 8.6e-08 60.5 98 38.8
Peaxi162Scf00003g00148 Petunia axillaris HOM05D000248 ORTHO05D000146 8.6e-08 60.5 98 39.8
Potri.001G050100 Populus trichocarpa HOM05D000248 ORTHO05D000146 8.6e-08 60.5 101 36.6
TWI23G0538 Tripterygium wilfordii HOM05D000248 ORTHO05D000146 8.6e-08 60.5 115 36.5
CsaV3_3G011110 Cucumis sativus L. HOM05D000248 ORTHO05D000146 1.1e-07 60.1 105 39.0
COL.COLO4_20291 Corchorus olitorius HOM05D000248 ORTHO05D000146 1.5e-07 59.7 99 37.4
CsaV3_3G011100 Cucumis sativus L. HOM05D000248 ORTHO05D000146 1.5e-07 59.7 105 37.1
CAN.G706.7 Capsicum annuum HOM05D000248 ORTHO05D000146 4.3e-07 58.2 96 35.4
Ciclev10003574m.g Citrus clementina HOM05D000248 ORTHO05D000146 5.6e-07 57.8 100 37.0
Cc02_g34460 Coffea canephora HOM05D000248 ORTHO05D000146 5.6e-07 57.8 99 37.4
TAR362G0817 Trochodendron aralioides HOM05D000248 ORTHO05D000146 5.6e-07 57.8 113 41.6
Eucgr.H01356 Eucalyptus grandis HOM05D000248 ORTHO05D000146 7.3e-07 57.4 111 34.2
Lj5C347G4 Lonicera japonica HOM05D000248 ORTHO05D000146 7.3e-07 57.4 101 33.7
Nitab4.5_0006355g0030 Nicotiana tabacum HOM05D000248 ORTHO05D000146 7.3e-07 57.4 96 35.4
TAR636G0165 Trochodendron aralioides HOM05D000248 ORTHO05D000146 7.3e-07 57.4 107 41.1
TAR636G1939 Trochodendron aralioides HOM05D000248 ORTHO05D000146 7.3e-07 57.4 104 40.4
CSS0035232 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 9.5e-07 57.0 100 37.0
Ciclev10005647m.g Citrus clementina HOM05D000248 ORTHO05D000146 1.2e-06 56.6 99 37.4
QL09p029160 Quercus lobata HOM05D000248 ORTHO05D000146 1.2e-06 56.6 97 38.1
Hma1.2p1_0472F.1_g159720 Hydrangea macrophylla HOM05D000248 ORTHO05D000146 1.6e-06 56.2 104 34.6
PSO017G6036 Papaver somniferum HOM05D000248 ORTHO05D000146 1.6e-06 56.2 121 35.5
AT2G02360 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 2.1e-06 55.8 91 36.3
Duzib151G0107 Durio zibethinus HOM05D000248 ORTHO05D000146 2.1e-06 55.8 95 37.9
QL09p029288 Quercus lobata HOM05D000248 ORTHO05D000146 2.1e-06 55.8 97 41.2
TWI59G0331 Tripterygium wilfordii HOM05D000248 ORTHO05D000146 2.1e-06 55.8 115 36.5
COL.COLO4_20279 Corchorus olitorius HOM05D000248 ORTHO05D000146 2.8e-06 55.5 99 37.4
Eucgr.H00080 Eucalyptus grandis HOM05D000248 ORTHO05D000146 2.8e-06 55.5 98 36.7
Nitab4.5_0000676g0270 Nicotiana tabacum HOM05D000248 ORTHO05D000146 2.8e-06 55.5 97 38.1
PGR031G0900 Punica granatum HOM05D000248 ORTHO05D000146 2.8e-06 55.5 110 32.7
Aqoxy2G03759 Aquilegia oxysepala HOM05D000248 ORTHO05D000146 3.6e-06 55.1 113 36.3
CSS0005023 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 3.6e-06 55.1 99 36.4
Ciclev10006729m.g Citrus clementina HOM05D000248 ORTHO05D000146 3.6e-06 55.1 99 35.4
Glyma.10G169600 Glycine max HOM05D000248 ORTHO05D000146 3.6e-06 55.1 98 39.8
Thecc.04G207800 Theobroma cacao HOM05D000248 ORTHO05D000146 3.6e-06 55.1 100 38.0
TAR365G0279 Trochodendron aralioides HOM05D000248 ORTHO05D000146 3.6e-06 55.1 94 41.5
CSS0048390 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 4.7e-06 54.7 101 37.6
Ciclev10003370m.g Citrus clementina HOM05D000248 ORTHO05D000146 4.7e-06 54.7 99 35.4
Dinv38257 Davidia involucrata HOM05D000248 ORTHO05D000146 4.7e-06 54.7 97 38.1
Lj3A568T35 Lonicera japonica HOM05D000248 ORTHO05D000146 4.7e-06 54.7 107 41.1
Duzib268G0519 Durio zibethinus HOM05D000248 ORTHO05D000146 6.2e-06 54.3 98 35.7
Lalb_Chr21g0311351 Lupinus albus HOM05D000248 ORTHO05D000146 6.2e-06 54.3 106 35.8
PSO063G6434 Papaver somniferum HOM05D000248 ORTHO05D000146 6.2e-06 54.3 121 34.7
PSO675G7575 Papaver somniferum HOM05D000248 ORTHO05D000146 6.2e-06 54.3 101 37.6
MELO3C006323.2 Cucumis melo HOM05D000248 ORTHO05D000146 8.1e-06 53.9 105 35.2
CsaV3_3G011120 Cucumis sativus L. HOM05D000248 ORTHO05D000146 8.1e-06 53.9 105 35.2
Nn1g07798 Nelumbo nucifera HOM05D000248 ORTHO05D000146 8.1e-06 53.9 115 35.7
Nn3g19934 Nelumbo nucifera HOM05D000248 ORTHO05D000146 8.1e-06 53.9 128 34.4
PSO017G0177 Papaver somniferum HOM05D000248 ORTHO05D000146 8.1e-06 53.9 101 33.7
Sabra01G0035000 Salix brachista HOM05D000248 ORTHO05D000146 8.1e-06 53.9 100 37.0
TWI73G0020 Tripterygium wilfordii HOM05D000248 ORTHO05D000146 8.1e-06 53.9 99 32.3
GSVIVG01003907001 Vitis vinifera HOM05D000248 ORTHO05D000146 8.1e-06 53.9 98 41.8


User provided reference genes

Program Settings