Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.2e-136 490.0 277 100.0
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.1e-55 219.5 152 79.6
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 3.6e-51 206.1 270 51.5
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 4.6e-51 205.7 275 51.3
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 8.5e-45 184.9 217 54.8
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.2e-44 183.0 209 56.9
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 4.7e-43 179.1 163 66.3
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.0e-42 177.9 203 58.1
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 1.8e-42 177.2 205 53.7
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.3e-40 171.0 158 64.6
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 7.0e-39 165.2 275 46.2
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 7.0e-39 165.2 183 55.7
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.7e-37 160.6 152 65.1
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 1.7e-37 160.6 254 44.1
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 3.8e-37 159.5 154 60.4
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 6.1e-35 152.1 160 63.1
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 6.1e-35 152.1 270 42.6
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 6.1e-35 152.1 132 67.4
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 1.2e-33 147.9 252 42.5
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 2.0e-33 147.1 126 69.8
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.0e-33 147.1 164 56.1
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 2.6e-33 146.7 157 56.7
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.3e-32 144.4 268 41.4
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 2.4e-31 140.2 213 44.6
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 4.1e-31 139.4 148 56.8
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 9.1e-31 138.3 151 54.3
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 1.2e-30 137.9 150 56.7
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.6e-30 137.5 270 41.5
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.5e-30 136.3 270 41.1
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 5.9e-30 135.6 163 54.0
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 1.7e-29 134.0 217 43.8
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 1.7e-29 134.0 158 53.2
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 5.0e-29 132.5 188 48.4
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.9e-28 130.6 165 52.7
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 3.2e-28 129.8 133 59.4
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 4.2e-28 129.4 150 52.7
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 5.5e-28 129.0 188 47.9
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 7.2e-28 128.6 215 42.3
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.6e-27 127.5 270 39.6
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 2.1e-27 127.1 166 52.4
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 3.6e-27 126.3 108 68.5
PSO170G1391 Papaver somniferum HOM05D006421 ORTHO05D008268 3.6e-27 126.3 149 54.4
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.0e-26 124.8 147 53.7
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.4e-26 124.4 188 46.8
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 5.2e-26 122.5 277 36.8
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 2.6e-25 120.2 161 51.6
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 9.8e-25 118.2 134 57.5
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 2.2e-24 117.1 149 51.7
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 2.2e-24 117.1 147 52.4
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.8e-23 114.0 125 56.0
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 2.7e-22 110.2 132 51.5
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 1.7e-21 107.5 123 56.9
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 5.0e-21 105.9 117 53.8
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 1.5e-20 104.4 165 41.8
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 1.5e-20 104.4 163 47.2
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.9e-20 104.0 125 54.4
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 2.5e-20 103.6 256 40.6
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 3.2e-20 103.2 152 51.3
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 3.2e-20 103.2 129 51.9
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 4.2e-20 102.8 135 49.6
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 4.2e-20 102.8 235 35.7
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 7.2e-20 102.1 138 48.6
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 1.6e-19 100.9 194 41.2
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 2.1e-19 100.5 271 31.0
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 1.0e-18 98.2 129 48.1
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 3.0e-18 96.7 123 48.8
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 5.2e-18 95.9 257 33.5
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 5.2e-18 95.9 257 34.2
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 2.0e-17 94.0 152 44.1
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 2.0e-17 94.0 147 43.5
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 2.0e-17 94.0 123 48.0
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 2.6e-17 93.6 117 48.7
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.3e-16 91.3 117 45.3
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.7e-16 90.9 149 43.0
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 1.7e-16 90.9 166 44.6
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 1.7e-16 90.9 121 47.9
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 2.8e-16 90.1 146 45.2
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 2.8e-16 90.1 123 50.4
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 4.9e-16 89.4 142 45.1
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 6.3e-16 89.0 194 35.6
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 1.1e-15 88.2 101 55.4
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.4e-15 87.0 161 44.1
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 9.2e-15 85.1 150 42.7
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 2.0e-14 84.0 148 42.6
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 5.9e-14 82.4 89 52.8
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 7.7e-14 82.0 153 44.4
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 7.7e-14 82.0 101 45.5
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.0e-13 81.6 179 37.4
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 1.3e-13 81.3 168 43.5
CDE06G2618 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 1.7e-13 80.9 122 45.1
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 2.3e-13 80.5 163 43.6
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 3.8e-13 79.7 158 40.5
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 4.3e-12 76.3 121 41.3
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 1.2e-11 74.7 146 40.4
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 4.7e-11 72.8 157 40.8
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 1.8e-10 70.9 61 65.6
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 3.0e-10 70.1 160 41.2
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 1.2e-09 68.2 158 43.7
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 2.0e-09 67.4 159 40.9
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 4.4e-09 66.2 157 39.5
BcaB01g02474 Brassica carinata HOM05D003550 ORTHO05D004336 1.3e-08 64.7 121 37.2
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 2.2e-08 63.9 103 45.6
C04p41180 Brassica napus HOM05D003550 ORTHO05D032327 1.2e-06 58.2 111 35.1
BolC4t25700H Brassica oleracea HOM05D003550 ORTHO05D032327 1.2e-06 58.2 111 35.1
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 2.7e-06 57.0 128 39.8
A09p35180 Brassica napus HOM05D048499 ORTHO05D040234 2.7e-06 57.0 140 29.3
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 7.8e-06 55.5 128 39.1


User provided reference genes

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