Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 0.0e+00 1210.7 631 100.0
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 9.9e-267 923.3 595 83.2
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.2e-226 789.3 606 70.8
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.8e-220 769.6 599 68.8
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.0e-218 763.8 583 70.2
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 4.2e-217 758.4 599 67.9
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 6.1e-216 754.6 598 67.9
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 3.1e-212 742.3 596 68.0
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 3.5e-211 738.8 601 66.2
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 5.0e-210 734.9 599 66.4
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.6e-208 729.9 605 66.6
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 7.5e-206 721.1 597 65.7
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 1.3e-205 720.3 599 64.9
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 1.7e-205 719.9 599 65.1
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 2.8e-205 719.2 598 65.7
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.1e-204 717.2 598 65.6
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.9e-203 711.4 599 64.3
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.3e-202 710.3 601 64.6
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.3e-201 705.3 599 64.8
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 5.6e-201 704.9 572 66.8
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 1.2e-200 703.7 597 64.2
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 4.7e-200 701.8 597 64.8
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.2e-198 697.2 599 64.1
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 4.4e-198 695.3 598 64.7
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.2e-197 693.0 599 63.8
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 2.9e-197 692.6 601 62.9
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 4.9e-197 691.8 599 64.6
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.1e-196 690.6 579 63.7
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 1.9e-196 689.9 599 63.9
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 2.4e-196 689.5 579 64.6
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.2e-196 689.1 599 63.6
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 7.0e-196 688.0 599 64.3
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 1.6e-195 686.8 627 60.6
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 3.5e-195 685.6 600 63.8
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 4.6e-195 685.3 600 61.5
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 6.0e-195 684.9 598 63.5
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 3.9e-194 682.2 600 62.5
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 6.6e-194 681.4 599 61.8
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.5e-193 679.5 591 63.6
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 9.5e-193 677.6 572 64.2
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 1.6e-192 676.8 602 60.8
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 2.1e-192 676.4 599 62.4
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 2.8e-192 676.0 600 62.3
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.4e-191 673.7 596 61.9
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 3.1e-191 672.5 603 61.9
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.4e-190 669.1 596 61.7
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.5e-190 667.9 599 60.8
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 7.5e-190 667.9 602 62.1
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.2e-189 666.4 599 59.9
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 2.9e-189 666.0 601 62.7
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.1e-188 664.1 593 62.7
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 5.4e-188 661.8 600 62.2
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 9.2e-188 661.0 600 61.5
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 6.0e-187 658.3 598 60.2
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.3e-186 657.1 599 61.4
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 5.1e-186 655.2 598 61.4
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 5.1e-186 655.2 600 59.8
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 9.5e-185 651.0 602 61.0
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 1.6e-184 650.2 597 60.3
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 3.6e-184 649.0 599 60.8
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 6.2e-184 648.3 593 59.9
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 1.1e-183 647.5 593 59.5
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 1.8e-183 646.7 593 59.5
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 2.3e-183 646.4 597 59.8
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 4.0e-183 645.6 599 60.3
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 4.4e-182 642.1 582 60.5
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 5.8e-182 641.7 601 59.2
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 7.5e-182 641.3 597 59.8
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 3.2e-180 636.0 604 60.8
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 5.4e-180 635.2 597 59.0
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 7.1e-180 634.8 598 59.5
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 3.5e-179 632.5 599 58.4
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.5e-177 626.3 597 58.8
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.5e-177 626.3 590 60.0
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 5.6e-177 625.2 588 57.0
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 9.5e-177 624.4 591 60.9
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.4e-175 619.8 589 56.9
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 2.4e-175 619.8 582 59.6
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 4.0e-175 619.0 621 56.8
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.5e-174 617.1 599 58.1
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.0e-174 616.7 589 58.4
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 4.4e-174 615.5 621 57.3
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 4.4e-174 615.5 589 60.4
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 5.8e-174 615.1 612 58.3
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 3.8e-173 612.5 598 57.2
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 4.9e-173 612.1 610 56.9
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 6.4e-173 611.7 594 57.7
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 1.9e-169 600.1 585 56.2
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.9e-169 600.1 610 55.9
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 1.2e-168 597.4 604 56.3
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.6e-168 597.0 589 58.2
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.1e-168 596.7 610 55.9
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 4.7e-168 595.5 610 55.7
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 4.7e-168 595.5 600 55.0
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 6.2e-168 595.1 598 57.5
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 8.1e-168 594.7 593 56.7
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.1e-167 594.3 610 55.6
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 2.4e-167 593.2 603 56.9
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.0e-166 590.1 610 55.2
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 2.9e-165 586.3 627 55.2
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 1.2e-163 580.9 630 53.3
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 1.6e-163 580.5 624 53.5
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 7.8e-163 578.2 595 54.5
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 2.8e-160 569.7 414 73.7
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 4.8e-160 568.9 597 55.6
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 4.0e-159 565.8 600 56.2
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 7.1e-156 555.1 601 53.6
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 9.6e-153 544.7 631 53.1
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 3.7e-152 542.7 586 54.3
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 4.0e-143 512.7 595 49.7
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 4.5e-142 509.2 587 49.2
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.0e-141 508.1 608 48.4
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 1.7e-141 507.3 619 48.1
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 2.2e-141 506.9 621 50.1
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.4e-140 504.2 619 47.0
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 2.5e-140 503.4 618 46.9
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 3.2e-140 503.1 608 47.9
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 2.1e-139 500.4 579 50.8
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 1.3e-138 497.7 608 47.7
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 3.0e-138 496.5 569 50.4
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 5.1e-138 495.7 597 49.4
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 1.3e-136 491.1 603 50.2
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 2.4e-135 486.9 619 46.4
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 5.9e-134 482.3 609 47.0
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.3e-133 481.1 589 50.3
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 5.0e-133 479.2 586 47.3
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.7e-130 468.8 603 47.9
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 1.5e-129 467.6 608 47.5
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 9.7e-129 464.9 590 46.9
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 4.1e-127 459.5 629 46.1
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 1.2e-126 458.0 606 45.2
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.5e-126 457.6 617 47.0
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 2.9e-125 453.4 597 48.1
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 4.2e-124 449.5 590 45.8
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 7.9e-123 445.3 603 45.3
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 9.4e-116 421.8 652 41.6
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 8.8e-114 415.2 605 45.6
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 4.5e-110 402.9 440 53.2
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 1.2e-102 378.3 470 50.4
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 1.2e-94 351.7 607 39.4
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.8e-91 340.5 620 38.9
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.1e-91 339.3 311 56.9
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 8.0e-91 339.0 611 37.3
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 5.4e-87 326.2 545 43.5
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 2.0e-86 324.3 403 46.2
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 7.3e-84 315.8 587 38.0
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 8.3e-80 302.4 363 48.5
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 1.0e-77 295.4 358 48.0
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-73 282.0 674 32.8
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 2.8e-67 260.8 603 35.0
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.0e-61 242.3 193 70.5
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 5.4e-55 219.9 352 42.9
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.8e-51 207.6 122 79.5
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 7.9e-46 189.5 303 37.3
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.2e-43 179.9 237 43.5
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.8e-41 173.3 267 44.9
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 4.9e-40 170.2 238 47.1
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 6.5e-24 116.7 106 65.1
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.5e-17 95.5 173 37.0
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 3.0e-13 81.3 99 51.5
MBI13_g36809_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D240810 1.1e-07 62.8 38 78.9
MBI13_g36808_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.5e-07 60.5 99 47.5


User provided reference genes

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