Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 1.0e-155 553.5 310 100.0
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 3.3e-98 362.5 296 71.3
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 1.0e-94 350.9 294 69.7
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 5.0e-94 348.6 312 68.6
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 1.9e-93 346.7 319 64.3
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 6.1e-92 341.7 294 67.7
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 7.4e-90 334.7 295 66.8
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.4e-88 329.7 295 66.4
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 4.1e-88 328.9 294 68.4
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 5.3e-88 328.6 307 64.8
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 4.5e-87 325.5 307 64.8
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 4.5e-87 325.5 294 65.3
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 8.5e-86 321.2 293 66.2
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 1.1e-85 320.9 295 64.1
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 2.5e-85 319.7 293 67.2
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 7.2e-85 318.2 312 61.9
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 2.3e-83 313.2 307 62.2
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 2.3e-83 313.2 294 64.6
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 5.2e-83 312.0 311 62.4
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 6.7e-83 311.6 293 64.2
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 2.6e-82 309.7 307 61.6
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 3.3e-82 309.3 307 61.6
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.4e-82 308.9 307 61.2
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 4.4e-82 308.9 321 60.7
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 7.4e-82 308.1 309 62.5
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 9.7e-82 307.8 259 68.3
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 1.3e-81 307.4 306 61.1
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.2e-81 306.6 294 63.3
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 2.2e-81 306.6 315 60.6
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 2.4e-80 303.1 294 61.9
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 3.1e-80 302.8 318 60.4
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 1.6e-79 300.4 296 63.5
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 3.5e-79 299.3 315 60.3
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 3.5e-79 299.3 294 62.9
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 1.3e-78 297.4 294 63.3
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 2.2e-78 296.6 294 61.2
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 2.2e-78 296.6 294 60.9
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 5.0e-78 295.4 318 58.8
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 1.2e-76 290.8 320 56.9
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 4.7e-76 288.9 294 59.9
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 8.0e-76 288.1 301 61.1
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.4e-75 287.3 294 61.2
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 1.7e-70 270.4 311 55.9
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 1.7e-70 270.4 295 58.6
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.7e-70 270.4 295 59.0
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 1.7e-70 270.4 318 58.2
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 5.0e-70 268.9 307 55.7
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 9.4e-69 264.6 254 63.0
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 1.6e-68 263.8 301 56.5
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 2.7e-68 263.1 299 57.5
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 4.7e-68 262.3 314 56.4
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 4.0e-67 259.2 264 63.6
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 6.8e-67 258.5 290 57.9
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 5.7e-66 255.4 317 56.2
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 7.0e-64 248.4 278 60.1
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 2.0e-63 246.9 293 56.7
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.9e-61 240.4 318 54.7
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 3.3e-61 239.6 300 56.0
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 5.5e-61 238.8 320 53.1
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 5.5e-61 238.8 320 53.1
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 4.7e-60 235.7 308 51.9
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 9.8e-58 228.0 266 52.6
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 4.1e-56 222.6 316 51.3
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 5.4e-56 222.2 295 50.5
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 7.8e-55 218.4 291 51.5
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 3.8e-54 216.1 270 53.7
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 5.0e-54 215.7 266 48.1
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 1.1e-53 214.5 244 59.0
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.5e-53 214.2 263 54.0
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 3.3e-53 213.0 222 61.7
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 4.3e-53 212.6 259 54.1
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.2e-52 211.1 229 56.8
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 1.6e-52 210.7 306 48.0
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 4.7e-52 209.1 311 48.2
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.3e-51 206.8 266 50.8
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 4.0e-51 206.1 294 48.3
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 2.6e-50 203.4 310 46.5
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 4.4e-50 202.6 311 46.0
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 5.8e-50 202.2 313 46.3
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 1.3e-49 201.1 324 44.4
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 1.7e-49 200.7 320 46.6
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 8.3e-49 198.4 297 46.1
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 1.1e-48 198.0 311 46.3
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 3.2e-48 196.4 274 47.1
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 2.0e-47 193.7 313 45.4
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 2.0e-47 193.7 295 48.8
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 6.0e-47 192.2 313 45.0
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 1.3e-46 191.0 312 45.8
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 1.3e-46 191.0 231 48.9
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 3.0e-46 189.9 312 45.8
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.9e-45 187.2 225 59.6
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 2.8e-44 183.3 277 52.3
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.3e-41 174.5 293 45.1
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 3.2e-40 169.9 226 48.7
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 5.4e-40 169.1 218 48.6
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 2.1e-39 167.2 208 49.0
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 6.6e-38 162.2 240 52.9
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 2.5e-37 160.2 244 46.7
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 1.6e-36 157.5 194 48.5
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 4.0e-35 152.9 258 42.6
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 1.2e-34 151.4 265 44.2
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 2.6e-34 150.2 189 48.1
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 6.6e-30 135.6 268 41.4
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.4e-24 117.9 79 79.7
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 1.2e-23 114.8 253 41.9
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 8.7e-22 108.6 134 46.3
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 2.6e-18 97.1 302 34.4
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 1.7e-17 94.4 284 31.3
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 1.0e-14 85.1 75 66.7
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 6.6e-14 82.4 234 31.2
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 8.7e-14 82.0 296 36.5
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 1.1e-13 81.6 156 38.5
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.9e-13 80.9 93 62.4
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 9.6e-13 78.6 121 54.5
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.3e-12 78.2 74 56.8
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 8.1e-12 75.5 321 34.3
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 2.6e-10 70.5 260 31.5
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 1.4e-08 64.7 296 28.0
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 3.2e-08 63.5 238 32.4


User provided reference genes

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