Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0507 Trochodendron aralioides HOM05D005220 ORTHO05D006082 5.8e-30 134.0 94 100.0
TAR636G1204 Trochodendron aralioides HOM05D005220 ORTHO05D006082 1.8e-23 112.5 93 63.4
TAR371G0084 Trochodendron aralioides HOM05D005220 ORTHO05D006082 1.0e-21 106.7 91 87.9
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 5.3e-15 84.3 93 50.5
Dinv34960 Davidia involucrata HOM05D005220 ORTHO05D006082 9.4e-12 73.6 98 45.9
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 4.6e-11 71.2 98 43.9
TAR622G0939 Trochodendron aralioides HOM05D005220 ORTHO05D006082 1.4e-10 69.7 101 41.6
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 1.8e-10 69.3 103 42.7
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 3.0e-10 68.6 98 41.8
MSTRG.3015 Avicennia marina HOM05D005220 ORTHO05D006082 1.1e-09 66.6 36 80.6
vmacro05657 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 4.3e-09 64.7 95 42.1
Oeu062150.1 Olea europaea HOM05D005220 ORTHO05D006082 5.7e-09 64.3 34 79.4
Actinidia01983 Actinidia chinensis HOM05D005220 ORTHO05D006082 7.4e-09 63.9 90 43.3
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 9.7e-09 63.5 98 39.8
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 9.7e-09 63.5 106 41.5
SalBow1G1470 Salvia bowleyana HOM05D005220 ORTHO05D006082 9.7e-09 63.5 36 72.2
Rhsim10G0044300 Rhododendron simsii HOM05D005220 ORTHO05D006082 1.3e-08 63.2 90 38.9
Actinidia07816 Actinidia chinensis HOM05D005220 ORTHO05D006082 2.2e-08 62.4 90 44.4
Migut.H00644 Erythranthe guttata HOM05D005220 ORTHO05D006082 2.2e-08 62.4 36 75.0
Oeu010241.1 Olea europaea HOM05D005220 ORTHO05D006082 2.2e-08 62.4 93 41.9
vmacro18154 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 3.7e-08 61.6 92 40.2
MBI16_g09907_MAGBIO Magnolia biondii HOM05D005220 ORTHO05D006082 6.3e-08 60.8 36 69.4
Potri.017G091700 Populus trichocarpa HOM05D005220 ORTHO05D006082 6.3e-08 60.8 96 40.6
TWI34G1812 Tripterygium wilfordii HOM05D005220 ORTHO05D006082 6.3e-08 60.8 93 45.2
MSTRG.23894 Avicennia marina HOM05D005220 ORTHO05D006082 1.1e-07 60.1 36 72.2
Lju41C5T5 Lonicera japonica HOM05D005220 ORTHO05D006082 1.1e-07 60.1 36 69.4
Lsat_1_v5_gn_2_87740 Lactuca sativa HOM05D005220 ORTHO05D006082 2.4e-07 58.9 98 39.8
TWI60G0661 Tripterygium wilfordii HOM05D005220 ORTHO05D006082 3.1e-07 58.5 91 41.8
Sabra17G0080700 Salix brachista HOM05D005220 ORTHO05D006082 4.1e-07 58.2 96 39.6
TAR374G0076 Trochodendron aralioides HOM05D005220 ORTHO05D006082 6.9e-07 57.4 34 64.7
Rhsim08G0074200 Rhododendron simsii HOM05D005220 ORTHO05D006082 9.1e-07 57.0 90 38.9
Manes.01G098100 Manihot esculenta HOM05D005220 ORTHO05D006082 1.2e-06 56.6 36 66.7
GSVIVG01011505001 Vitis vinifera HOM05D005220 ORTHO05D006082 1.2e-06 56.6 95 37.9
ATR0064G106 Amborella trichopoda HOM05D005220 ORTHO05D006082 1.5e-06 56.2 36 66.7
CDE10G0382 Ceratophyllum demersum HOM05D005220 ORTHO05D006082 2.0e-06 55.8 33 75.8
HanXRQChr14g0448751 Helianthus annuus HOM05D005220 ORTHO05D006082 5.9e-06 54.3 36 72.2
Aqoxy3G03583 Aquilegia oxysepala HOM05D005220 ORTHO05D006082 7.7e-06 53.9 36 63.9
Sed0003803 Sechium edule HOM05D005220 ORTHO05D006082 7.7e-06 53.9 92 35.9


User provided reference genes

Program Settings