Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 2.7e-228 795.0 418 100.0
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 8.0e-156 554.3 420 71.0
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 1.7e-145 520.0 391 71.1
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 4.3e-141 505.4 402 66.7
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 4.3e-141 505.4 393 69.0
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 1.3e-137 493.8 391 68.3
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 2.9e-137 492.7 386 66.6
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 1.9e-136 490.0 388 68.8
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 2.1e-135 486.5 387 68.2
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 1.7e-134 483.4 393 67.7
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 5.6e-133 478.4 391 67.5
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 4.7e-132 475.3 389 66.1
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 6.2e-132 474.9 386 65.5
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 1.4e-131 473.8 385 65.2
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 2.4e-131 473.0 388 66.8
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 5.8e-130 468.4 387 65.1
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 9.9e-130 467.6 409 62.6
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 4.9e-129 465.3 386 65.3
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 4.2e-128 462.2 389 65.3
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 5.4e-128 461.8 401 62.6
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 1.2e-127 460.7 390 64.1
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 1.6e-127 460.3 391 63.9
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 6.0e-127 458.4 391 64.5
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 7.8e-127 458.0 401 62.1
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.0e-126 456.1 394 62.2
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 6.6e-126 454.9 392 63.3
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 7.3e-125 451.4 390 62.8
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 9.6e-125 451.1 434 58.5
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 9.6e-125 451.1 394 62.9
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 3.6e-124 449.1 387 63.6
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 1.1e-123 447.6 348 68.1
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 2.4e-123 446.4 388 62.9
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 5.3e-123 445.3 329 70.5
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 7.6e-122 441.4 395 61.5
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 7.6e-122 441.4 398 60.8
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 1.3e-121 440.7 382 62.3
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 1.7e-121 440.3 384 62.8
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 1.7e-121 440.3 393 60.1
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 3.8e-121 439.1 391 63.7
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 4.9e-121 438.7 389 61.2
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 4.9e-121 438.7 382 61.5
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 8.4e-121 438.0 366 63.7
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 1.1e-120 437.6 410 60.0
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 1.4e-120 437.2 354 65.5
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 3.2e-120 436.0 410 59.8
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 3.2e-120 436.0 389 61.2
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 4.2e-120 435.6 388 61.9
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 6.0e-119 431.8 358 63.4
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 3.0e-118 429.5 409 57.9
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 2.5e-117 426.4 416 59.4
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 4.3e-117 425.6 388 60.6
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 3.7e-116 422.5 337 66.5
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 4.8e-116 422.2 387 59.9
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 1.4e-115 420.6 392 59.7
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 4.0e-115 419.1 388 60.1
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 7.6e-114 414.8 343 65.9
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 3.8e-113 412.5 367 62.4
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 8.4e-113 411.4 405 57.3
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 1.4e-112 410.6 399 58.4
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 3.5e-111 406.0 355 61.4
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 4.6e-111 405.6 410 57.3
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 7.9e-111 404.8 384 58.1
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 1.3e-110 404.1 376 58.0
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 8.7e-110 401.4 382 59.9
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 5.6e-109 398.7 341 63.9
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 1.3e-108 397.5 392 56.9
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 3.1e-107 392.9 410 54.4
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 7.6e-106 388.3 371 60.1
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 4.2e-104 382.5 404 53.0
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 8.7e-102 374.8 276 70.3
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 5.3e-99 365.5 392 55.6
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 9.0e-99 364.8 411 53.3
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 5.5e-96 355.5 312 61.9
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 8.7e-94 348.2 389 54.2
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 9.7e-93 344.7 462 47.4
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 3.7e-92 342.8 388 51.3
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 4.5e-90 335.9 310 60.6
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 4.5e-90 335.9 392 48.2
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 6.5e-89 332.0 247 69.6
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 2.6e-85 320.1 221 74.2
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 1.7e-84 317.4 316 57.0
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 6.9e-83 312.0 392 48.5
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 4.7e-79 299.3 278 60.8
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 2.0e-74 283.9 204 73.0
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 4.0e-70 269.6 186 75.3
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 1.3e-68 264.6 186 73.1
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 1.8e-67 260.8 325 46.5
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.2e-66 258.1 303 50.2
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 9.4e-64 248.4 403 40.7
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 4.0e-62 243.0 245 58.0
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 3.1e-59 233.4 447 36.2
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 1.6e-58 231.1 396 39.4
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 9.5e-56 221.9 208 61.5
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 1.2e-50 204.9 145 74.5
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 2.1e-39 167.5 120 73.3
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 5.2e-38 162.9 131 66.4
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 8.3e-36 155.6 104 76.9
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 3.2e-35 153.7 116 69.8
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 4.6e-34 149.8 100 77.0
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 2.2e-28 131.0 337 33.2
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 2.9e-28 130.6 87 75.9
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 2.3e-25 120.9 162 47.5
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 7.3e-24 115.9 350 28.3
CSS0007704 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 1.4e-19 101.7 83 65.1
Haze_16199 Corylus avellana HOM05D007236 ORTHO05D009150 3.6e-15 87.0 76 65.8
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 1.4e-14 85.1 402 25.9
Nitab4.5_0000499g0130 Nicotiana tabacum HOM05D007236 ORTHO05D009150 3.0e-09 67.4 55 63.6
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 2.5e-08 64.3 57 52.6
SEGI_17616 Sequoiadendron giganteum HOM05D001509 ORTHO05D001361 4.0e-06 57.0 236 23.3


User provided reference genes

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