Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0495 Trochodendron aralioides HOM05D007207 ORTHO05D009041 3.4e-104 382.1 263 100.0
TAR633G1504 Trochodendron aralioides HOM05D000656 ORTHO05D000871 1.5e-35 154.1 97 79.4
Nn2g13070 Nelumbo nucifera HOM05D007207 ORTHO05D009041 2.8e-29 133.3 99 71.7
CiPaw.13G111000 Carya illinoinensis HOM05D007207 ORTHO05D009041 2.2e-26 123.6 94 63.8
PSO339G6489 Papaver somniferum HOM05D007207 ORTHO05D009041 4.2e-25 119.4 95 67.4
MD03G1114400 Malus domestica HOM05D007207 ORTHO05D009041 5.4e-25 119.0 95 62.1
RcHm_v2.0_Chr5g0059711 Rosa chinensis HOM05D007207 ORTHO05D009041 1.6e-24 117.5 93 61.3
PSO063G2032 Papaver somniferum HOM05D007207 ORTHO05D009041 2.1e-24 117.1 95 66.3
Hma1.2p1_1030F.1_g249850 Hydrangea macrophylla HOM05D007207 ORTHO05D009041 3.5e-24 116.3 97 63.9
CANSAT54G0517 Cannabis sativa HOM05D007207 ORTHO05D009041 6.0e-24 115.5 91 63.7
Phvul.011G077500 Phaseolus vulgaris HOM05D007207 ORTHO05D009041 7.8e-24 115.2 93 62.4
Sed0024734 Sechium edule HOM05D007207 ORTHO05D009041 1.0e-23 114.8 92 60.9
GSVIVG01025169001 Vitis vinifera HOM05D007207 ORTHO05D009041 2.3e-23 113.6 91 63.7
Duzib170G0585 Durio zibethinus HOM05D007207 ORTHO05D009041 3.0e-23 113.2 96 57.3
QL01p022653 Quercus lobata HOM05D007207 ORTHO05D009041 3.0e-23 113.2 94 57.4
FvH4_3g32640 Fragaria vesca HOM05D007207 ORTHO05D009041 3.9e-23 112.8 93 60.2
FAN11G2184 Fragaria x ananassa HOM05D007207 ORTHO05D009041 3.9e-23 112.8 93 60.2
Actinidia20448 Actinidia chinensis HOM05D007207 ORTHO05D009041 5.1e-23 112.5 98 63.3
MBI11_g23474_MAGBIO Magnolia biondii HOM05D007207 ORTHO05D009041 5.1e-23 112.5 94 57.4
VMungo1127G1112 Vigna mungo HOM05D007207 ORTHO05D009041 5.1e-23 112.5 93 61.3
FAN25G0070 Fragaria x ananassa HOM05D007207 ORTHO05D009041 6.6e-23 112.1 92 62.0
Dinv32761 Davidia involucrata HOM05D007207 ORTHO05D009041 1.9e-22 110.5 90 65.6
QL01p022696 Quercus lobata HOM05D007207 ORTHO05D009041 1.9e-22 110.5 94 56.4
AUR62039621 Chenopodium quinoa HOM05D007207 ORTHO05D009041 5.6e-22 109.0 96 62.5
FAN21G0351 Fragaria x ananassa HOM05D007207 ORTHO05D009041 7.3e-22 108.6 93 58.1
Hund08142 Selenicereus undatus HOM05D007207 ORTHO05D009041 1.3e-21 107.8 94 59.6
EL10Ac9g22498 Beta vulgaris HOM05D007207 ORTHO05D009041 2.1e-21 107.1 95 61.1
Potri.009G012300 Populus trichocarpa HOM05D007207 ORTHO05D009041 4.8e-21 105.9 99 55.6
Duzib168G2405 Durio zibethinus HOM05D007207 ORTHO05D009041 8.1e-21 105.1 94 57.4
THA.LOC104815749 Tarenaya hassleriana HOM05D007207 ORTHO05D009041 1.8e-20 104.0 94 55.3
Medtr4g059710 Medicago truncatula HOM05D007207 ORTHO05D009041 2.4e-20 103.6 96 54.2
MSTRG.17815 Avicennia marina HOM05D007207 ORTHO05D009041 3.1e-20 103.2 89 58.4
Ca_05249_v3 Cicer arietinum L. HOM05D007207 ORTHO05D009041 3.1e-20 103.2 91 56.0
Ciclev10030232m.g Citrus clementina HOM05D007207 ORTHO05D009041 3.1e-20 103.2 92 54.3
Gohir.A07G117400 Gossypium hirsutum HOM05D007207 ORTHO05D009041 3.1e-20 103.2 94 54.3
TWI79G0777 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 4.0e-20 102.8 92 55.4
Glyma.12G069100 Glycine max HOM05D007207 ORTHO05D009041 1.2e-19 101.3 93 54.8
Gohir.D07G121800 Gossypium hirsutum HOM05D007207 ORTHO05D009041 1.2e-19 101.3 94 54.3
Gorai.001G131300 Gossypium raimondii HOM05D007207 ORTHO05D009041 1.2e-19 101.3 94 54.3
Psat7g224520 Pisum sativum HOM05D007207 ORTHO05D009041 1.2e-19 101.3 88 58.0
Peaxi162Scf00686g00043 Petunia axillaris HOM05D007207 ORTHO05D009041 1.5e-19 100.9 90 57.8
TPR.G17530 Trifolium pratense HOM05D007207 ORTHO05D009041 2.6e-19 100.1 93 58.1
Lj3g0024872 Lotus japonicus HOM05D007207 ORTHO05D009041 3.4e-19 99.8 91 56.0
Thecc.09G257600 Theobroma cacao HOM05D007207 ORTHO05D009041 3.4e-19 99.8 94 53.2
Lsat_1_v5_gn_1_65500 Lactuca sativa HOM05D007207 ORTHO05D009041 4.5e-19 99.4 90 57.8
Ah.01g015070 Amaranthus hybridus HOM05D007207 ORTHO05D009041 5.8e-19 99.0 93 59.1
CDE06G2547 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 5.8e-19 99.0 95 52.6
Sc06g0010040 Simmondsia chinensis HOM05D007207 ORTHO05D009041 5.8e-19 99.0 92 57.6
CDE07G0349 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 7.6e-19 98.6 95 51.6
HanXRQChr01g0018341 Helianthus annuus HOM05D007207 ORTHO05D009041 7.6e-19 98.6 90 55.6
Solyc06g016750.3 Solanum lycopersicum HOM05D007207 ORTHO05D009041 9.9e-19 98.2 90 54.4
arahy.Tifrunner.gnm1.ann1.F7CTDZ Arachis hypogaea HOM05D007207 ORTHO05D009041 1.3e-18 97.8 89 52.8
arahy.Tifrunner.gnm1.ann1.KZS5BJ Arachis hypogaea HOM05D007207 ORTHO05D009041 1.3e-18 97.8 89 52.8
Sopen06g007140 Solanum pennellii HOM05D007207 ORTHO05D009041 1.7e-18 97.4 90 54.4
CAN.G934.2 Capsicum annuum HOM05D007207 ORTHO05D009041 2.2e-18 97.1 90 56.7
Manes.04G022800 Manihot esculenta HOM05D007207 ORTHO05D009041 2.2e-18 97.1 91 51.6
Rhsim01G0217900 Rhododendron simsii HOM05D007207 ORTHO05D009041 2.9e-18 96.7 136 43.4
Cc01_g11290 Coffea canephora HOM05D007207 ORTHO05D009041 3.8e-18 96.3 93 53.8
ECA248G1375 Erigeron canadensis HOM05D000214 ORTHO05D000131 3.8e-18 96.3 90 55.6
MELO3C025765.2 Cucumis melo HOM05D007207 ORTHO05D009041 4.9e-18 95.9 144 39.6
HPP92_012669 Vanilla planifolia HOM05D007207 ORTHO05D009041 4.9e-18 95.9 102 52.0
Os03g0852300 Oryza sativa ssp. japonica HOM05D007207 ORTHO05D009041 1.1e-17 94.7 90 53.3
SalBow3G2981 Salvia bowleyana HOM05D007207 ORTHO05D009041 4.2e-17 92.8 90 50.0
Lalb_Chr01g0004241 Lupinus albus HOM05D007207 ORTHO05D009041 9.3e-17 91.7 97 48.5
TWI75G1762 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 9.3e-17 91.7 91 52.7
AT1G07980 Arabidopsis thaliana HOM05D007207 ORTHO05D009041 2.7e-16 90.1 88 53.4
PGR102G0648 Punica granatum HOM05D007207 ORTHO05D009041 3.5e-16 89.7 88 52.3
Thhalv10008787m.g Eutrema salsugineum HOM05D007207 ORTHO05D009041 6.0e-16 89.0 88 53.4
BcaC07g42510 Brassica carinata HOM05D007207 ORTHO05D009041 7.9e-16 88.6 88 53.4
A06p05070 Brassica napus HOM05D007207 ORTHO05D009041 7.9e-16 88.6 88 53.4
A09p66080 Brassica napus HOM05D007207 ORTHO05D009041 7.9e-16 88.6 88 53.4
BraA06t23713Z Brassica rapa HOM05D007207 ORTHO05D009041 7.9e-16 88.6 88 53.4
BraA09t41946Z Brassica rapa HOM05D007207 ORTHO05D009041 7.9e-16 88.6 88 53.4
Carub.0001s0733 Capsella rubella HOM05D007207 ORTHO05D009041 7.9e-16 88.6 88 51.1
CARHR007760 Cardamine hirsuta HOM05D007207 ORTHO05D009041 7.9e-16 88.6 88 52.3
SGA_v2.0_scaffold80G25756 Striga asiatica HOM05D007207 ORTHO05D009041 7.9e-16 88.6 126 41.3
Aa31LG2G9300 Aethionema arabicum HOM05D007207 ORTHO05D009041 1.0e-15 88.2 95 46.3
BcaB02g06697 Brassica carinata HOM05D007207 ORTHO05D009041 1.0e-15 88.2 88 53.4
Glyma.11G148000 Glycine max HOM05D007207 ORTHO05D009041 2.3e-15 87.0 89 52.8
AL1G18310 Arabidopsis lyrata HOM05D007207 ORTHO05D009041 3.0e-15 86.7 88 51.1
SEGI_13018 Sequoiadendron giganteum HOM05D007207 ORTHO05D009041 3.0e-15 86.7 95 48.4
BcaC05g24714 Brassica carinata HOM05D007207 ORTHO05D009041 1.1e-14 84.7 89 52.8
C05p06030 Brassica napus HOM05D007207 ORTHO05D009041 1.1e-14 84.7 89 52.8
C08p50230 Brassica napus HOM05D007207 ORTHO05D009041 1.1e-14 84.7 88 50.0
BolC5t29362H Brassica oleracea HOM05D007207 ORTHO05D009041 1.1e-14 84.7 89 52.8
BolC8t52552H Brassica oleracea HOM05D007207 ORTHO05D009041 1.1e-14 84.7 88 50.0
Sabra09G0008800 Salix brachista HOM05D007207 ORTHO05D009041 1.1e-14 84.7 154 35.7
Sp1g06610 Schrenkiella parvula HOM05D007207 ORTHO05D009041 1.1e-14 84.7 91 47.3
ClCG02G021080 Citrullus lanatus HOM05D007207 ORTHO05D009041 1.5e-14 84.3 154 35.1
Actinidia03739 Actinidia chinensis HOM05D007207 ORTHO05D009041 1.9e-14 84.0 77 58.4
Atru.chr3.3663 Acer truncatum HOM05D007207 ORTHO05D009041 7.4e-14 82.0 121 43.0
Prupe.6G099600 Prunus persica HOM05D007207 ORTHO05D009041 1.1e-12 78.2 58 60.3
CsaV3_6G021790 Cucumis sativus L. HOM05D007207 ORTHO05D009041 3.1e-12 76.6 57 59.6
AUR62024995 Chenopodium quinoa HOM05D007207 ORTHO05D009041 3.4e-11 73.2 63 61.9
Zm00001eb064730 Zea mays HOM05D007207 ORTHO05D009041 5.8e-11 72.4 85 47.1
Duzib170G0223 Durio zibethinus HOM05D007207 ORTHO05D009041 7.6e-11 72.0 57 56.1
Oeu027462.1 Olea europaea HOM05D007207 ORTHO05D009041 9.9e-11 71.6 56 57.1
unitig_699.g19196 Utricularia gibba HOM05D007207 ORTHO05D009041 9.9e-11 71.6 71 53.5
vmacro14446 Vaccinium macrocarpon HOM05D007207 ORTHO05D009041 9.9e-11 71.6 90 46.7
AagrBONN_evm.TU.Sc2ySwM_228.2356 Anthoceros agrestis HOM05D007207 ORTHO05D009041 4.9e-10 69.3 87 44.8
Mapoly0168s0007 Marchantia polymorpha HOM05D007207 ORTHO05D009041 6.4e-10 68.9 92 44.6
Migut.N02608 Erythranthe guttata HOM05D007207 ORTHO05D009041 1.9e-09 67.4 57 56.1
PGSC0003DMG401030137 Solanum tuberosum HOM05D038777 ORTHO05D009041 4.2e-09 66.2 56 55.4
CBR_g30333 Chara braunii HOM05D000789 ORTHO05D000897 3.5e-08 63.2 85 44.7
SHI06088 Sapria himalayana HOM05D007207 ORTHO05D009041 2.3e-07 60.5 59 50.8
CSS0045141 Camellia sinensis var. sinensis HOM05D057576 ORTHO05D043279 1.9e-06 57.4 68 47.1
CSS0050033 Camellia sinensis var. sinensis HOM05D057576 ORTHO05D043279 1.9e-06 57.4 68 47.1
Pp3c17_12030 Physcomitrium patens HOM05D007207 ORTHO05D009041 3.3e-06 56.6 86 39.5
Aa31LG8G12190 Aethionema arabicum HOM05D007207 ORTHO05D009041 4.3e-06 56.2 52 48.1


User provided reference genes

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