Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 6.4e-228 793.9 442 100.0
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 6.3e-159 564.7 411 72.7
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 9.4e-155 550.8 432 68.1
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 7.0e-142 508.1 430 65.3
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 2.7e-141 506.1 427 66.0
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 4.5e-141 505.4 430 64.4
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 1.9e-139 500.0 409 65.0
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 9.4e-139 497.7 411 64.5
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 3.6e-138 495.7 414 64.0
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 8.8e-137 491.1 441 60.3
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 1.5e-136 490.3 410 63.7
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 7.5e-136 488.0 410 64.1
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 1.1e-134 484.2 411 61.8
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 1.8e-134 483.4 408 61.8
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 1.8e-134 483.4 408 61.8
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 2.4e-134 483.0 409 63.8
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 3.5e-133 479.2 412 61.7
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 1.7e-132 476.9 411 61.6
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 2.5e-131 473.0 408 62.0
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 2.1e-130 469.9 440 60.2
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 1.0e-129 467.6 410 61.7
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 3.0e-129 466.1 411 59.9
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 6.8e-129 464.9 409 60.1
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 1.2e-128 464.2 411 60.1
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 4.4e-128 462.2 440 57.0
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 5.7e-128 461.8 409 60.6
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 2.8e-127 459.5 413 60.0
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 1.6e-125 453.8 411 58.6
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 5.9e-125 451.8 413 58.4
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 2.1e-122 443.4 412 57.5
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 3.6e-122 442.6 408 58.6
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 6.1e-122 441.8 443 56.7
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 6.1e-122 441.8 410 58.8
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 8.0e-122 441.4 412 57.5
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 1.0e-121 441.0 411 56.7
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 1.2e-120 437.6 412 57.8
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 9.8e-120 434.5 411 56.2
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 9.8e-120 434.5 374 59.9
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 1.3e-119 434.1 411 57.2
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 2.2e-119 433.3 414 57.5
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 6.4e-119 431.8 408 56.9
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 3.2e-118 429.5 410 56.6
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 7.0e-118 428.3 410 58.0
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 7.0e-118 428.3 410 55.4
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 2.7e-117 426.4 413 54.7
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 6.0e-117 425.2 410 56.3
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 8.6e-116 421.4 410 55.9
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 1.9e-115 420.2 410 56.1
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 1.9e-115 420.2 388 57.5
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 3.3e-115 419.5 410 56.1
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 4.3e-115 419.1 408 54.9
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 1.6e-114 417.2 410 54.4
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 2.8e-114 416.4 410 55.6
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 2.8e-114 416.4 408 55.9
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 3.6e-114 416.0 408 53.7
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 4.7e-114 415.6 410 53.7
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 1.8e-113 413.7 388 56.7
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 3.1e-113 412.9 408 54.9
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 3.1e-113 412.9 412 54.6
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.2e-113 412.1 415 54.2
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 1.2e-112 411.0 408 53.2
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 1.5e-112 410.6 411 53.0
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 2.0e-112 410.2 410 52.4
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 3.4e-112 409.5 415 54.2
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 5.8e-112 408.7 408 53.4
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 5.8e-112 408.7 410 53.4
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 7.5e-112 408.3 410 54.4
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 1.6e-109 400.6 408 52.5
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 3.5e-109 399.4 415 52.5
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 7.8e-109 398.3 408 52.7
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 1.3e-108 397.5 409 53.3
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 3.1e-105 386.3 409 53.1
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 4.0e-105 386.0 410 53.7
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 4.0e-105 386.0 440 49.5
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 4.0e-105 386.0 356 57.3
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 2.6e-104 383.3 395 52.4
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 1.7e-103 380.6 413 53.0
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 2.2e-103 380.2 409 51.1
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 4.1e-102 375.9 405 51.1
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 3.9e-100 369.4 435 48.5
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 8.6e-100 368.2 379 53.8
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 1.1e-99 367.9 409 51.6
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 1.9e-99 367.1 407 49.9
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 6.2e-98 362.1 422 49.5
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 2.0e-96 357.1 302 60.3
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 7.6e-96 355.1 357 56.9
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 1.5e-88 330.9 328 58.8
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 2.1e-85 320.5 403 46.2
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 7.3e-83 312.0 315 56.8
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 1.6e-82 310.8 323 57.9
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 4.5e-80 302.8 400 45.5
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 4.6e-77 292.7 408 43.9
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 6.0e-77 292.4 300 55.0
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 8.7e-76 288.5 377 40.8
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 4.0e-73 279.6 382 43.7
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 1.9e-70 270.8 425 37.2
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 1.0e-63 248.4 243 56.8
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 2.5e-62 243.8 390 37.4
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 2.5e-59 233.8 202 54.5
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 9.0e-57 225.3 198 53.5
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 1.5e-40 171.4 213 49.3
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 2.6e-35 154.1 198 41.9
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 1.8e-28 131.3 87 66.7
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.0e-23 115.5 121 48.8
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 3.4e-19 100.5 227 33.5
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.7e-18 98.2 65 64.6
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.1e-17 93.6 56 69.6
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 9.1e-17 92.4 64 65.6
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 2.0e-11 74.7 111 49.5
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 4.9e-10 70.1 100 47.0
SGA_v2.0_scaffold81G26073 Striga asiatica HOM05D006834 ORTHO05D008623 1.0e-07 62.4 85 45.9
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.7e-07 61.6 35 74.3


User provided reference genes

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