Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 3.8e-53 211.1 96 100.0
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 1.2e-33 146.4 86 81.4
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 5.4e-31 137.5 84 71.4
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 1.0e-29 133.3 85 71.8
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 4.3e-28 127.9 83 69.9
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 1.2e-27 126.3 85 71.8
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 3.6e-27 124.8 84 71.4
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 8.0e-27 123.6 84 69.0
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 1.4e-26 122.9 78 66.7
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 1.8e-26 122.5 66 78.8
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 5.2e-26 120.9 73 71.2
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 2.0e-25 119.0 84 66.7
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 2.6e-25 118.6 73 67.1
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 3.4e-25 118.2 94 66.0
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 4.4e-25 117.9 84 66.7
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.8e-25 117.5 84 66.7
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 9.8e-25 116.7 84 65.5
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 1.3e-24 116.3 86 57.0
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 1.7e-24 115.9 76 64.5
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.7e-24 115.9 83 60.2
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.2e-24 115.5 84 64.3
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.9e-24 115.2 84 64.3
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 2.9e-24 115.2 90 61.1
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 3.7e-24 114.8 80 63.8
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 4.9e-24 114.4 65 73.8
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.9e-24 114.4 85 65.9
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 6.4e-24 114.0 82 67.1
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 8.3e-24 113.6 69 69.6
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 8.3e-24 113.6 73 67.1
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 1.1e-23 113.2 77 67.5
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 1.4e-23 112.8 84 63.1
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 1.4e-23 112.8 56 80.4
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.4e-23 112.8 74 68.9
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 1.9e-23 112.5 85 62.4
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.9e-23 112.5 68 67.6
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 1.9e-23 112.5 65 75.4
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 2.4e-23 112.1 77 64.9
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 2.4e-23 112.1 80 62.5
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 3.2e-23 111.7 82 61.0
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 3.2e-23 111.7 74 64.9
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 3.2e-23 111.7 65 70.8
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 4.1e-23 111.3 74 68.9
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.4e-23 110.9 87 60.9
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 7.1e-23 110.5 75 62.7
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.1e-23 110.5 87 60.9
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 7.1e-23 110.5 87 60.9
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 9.2e-23 110.2 78 60.3
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 1.2e-22 109.8 76 61.8
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 1.2e-22 109.8 76 60.5
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 1.2e-22 109.8 77 63.6
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.6e-22 109.4 59 72.9
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.7e-22 108.6 86 58.1
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 2.7e-22 108.6 85 65.9
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 3.5e-22 108.2 65 67.7
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.5e-22 108.2 80 63.8
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 3.5e-22 108.2 86 65.1
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 4.6e-22 107.8 70 67.1
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 4.6e-22 107.8 70 67.1
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 4.6e-22 107.8 70 67.1
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 4.6e-22 107.8 70 67.1
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 4.6e-22 107.8 70 67.1
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 4.6e-22 107.8 85 64.7
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 6.0e-22 107.5 80 63.8
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 6.0e-22 107.5 80 63.8
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 6.0e-22 107.5 50 86.0
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 6.0e-22 107.5 83 54.2
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 7.8e-22 107.1 86 61.6
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 1.0e-21 106.7 70 68.6
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.0e-21 106.7 57 73.7
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 1.0e-21 106.7 50 88.0
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 1.3e-21 106.3 64 67.2
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 1.3e-21 106.3 76 60.5
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 1.3e-21 106.3 86 65.1
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 3.0e-21 105.1 71 67.6
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 3.0e-21 105.1 83 57.8
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 3.9e-21 104.8 50 84.0
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 3.9e-21 104.8 70 62.9
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 5.1e-21 104.4 68 66.2
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 8.6e-21 103.6 54 79.6
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 8.6e-21 103.6 56 71.4
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 8.6e-21 103.6 83 55.4
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 1.1e-20 103.2 48 83.3
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 1.5e-20 102.8 71 62.0
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.5e-20 102.8 93 54.8
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.5e-20 102.8 76 59.2
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 1.9e-20 102.4 48 83.3
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 1.9e-20 102.4 50 80.0
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 1.9e-20 102.4 74 64.9
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.9e-20 102.4 80 61.2
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.9e-20 102.4 85 55.3
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 4.3e-20 101.3 48 81.2
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 4.3e-20 101.3 79 55.7
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 4.3e-20 101.3 79 55.7
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 4.3e-20 101.3 79 55.7
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 7.3e-20 100.5 50 78.0
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 1.6e-19 99.4 51 76.5
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.6e-19 99.4 50 76.0
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 2.1e-19 99.0 64 67.2
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 2.1e-19 99.0 49 77.6
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 2.8e-19 98.6 75 62.7
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 2.8e-19 98.6 78 55.1
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 2.8e-19 98.6 74 60.8
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 4.7e-19 97.8 64 62.5
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 4.7e-19 97.8 45 84.4
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 8.1e-19 97.1 50 72.0
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 1.1e-18 96.7 49 75.5
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.1e-18 96.7 49 75.5
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.4e-18 96.3 47 83.0
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 5.2e-18 94.4 71 57.7
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 6.8e-18 94.0 48 72.9
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 1.5e-17 92.8 81 53.1
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.5e-17 92.8 77 59.7
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 1.5e-17 92.8 80 51.2
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 2.6e-17 92.0 52 71.2
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 1.1e-15 86.7 54 63.0
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 2.1e-14 82.4 49 61.2


User provided reference genes

Program Settings