Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 9.7e-68 260.0 130 100.0
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 1.6e-30 136.3 100 73.0
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 1.9e-26 122.9 100 65.0
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 2.4e-26 122.5 99 66.7
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 1.6e-25 119.8 107 62.6
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.3e-24 116.7 99 63.6
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 1.7e-24 116.3 100 64.0
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 8.6e-24 114.0 106 62.3
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.1e-23 113.6 101 63.4
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 2.5e-23 112.5 99 62.6
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 7.3e-23 110.9 99 62.6
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 9.5e-23 110.5 106 65.1
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 3.6e-22 108.6 102 61.8
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 6.2e-22 107.8 103 58.3
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 6.2e-22 107.8 98 60.2
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 1.4e-21 106.7 98 58.2
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.4e-21 105.9 110 56.4
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 5.2e-21 104.8 105 56.2
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 6.8e-21 104.4 99 59.6
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 6.8e-21 104.4 98 57.1
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.2e-20 103.6 100 59.0
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 1.5e-20 103.2 100 58.0
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.6e-20 102.4 98 56.1
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.6e-20 102.4 101 59.4
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 3.4e-20 102.1 98 56.1
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 4.4e-20 101.7 100 57.0
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 4.4e-20 101.7 106 60.4
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 9.9e-20 100.5 100 57.0
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 2.2e-19 99.4 100 58.0
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.8e-19 98.6 100 57.0
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 6.4e-19 97.8 99 57.6
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 8.4e-19 97.4 98 58.2
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.1e-18 97.1 100 57.0
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.9e-18 96.3 99 57.6
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 2.4e-18 95.9 100 54.0
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.2e-18 95.1 97 55.7
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 4.2e-18 95.1 99 56.6
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 5.4e-18 94.7 98 56.1
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 5.4e-18 94.7 98 56.1
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 5.4e-18 94.7 104 52.9
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 7.1e-18 94.4 100 55.0
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 1.2e-17 93.6 100 56.0
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 2.1e-17 92.8 98 56.1
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.1e-17 92.8 100 54.0
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 3.5e-17 92.0 102 50.0
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 3.5e-17 92.0 102 52.9
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 4.6e-17 91.7 99 56.6
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.6e-17 91.7 97 54.6
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 6.0e-17 91.3 101 54.5
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 6.0e-17 91.3 114 50.9
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 6.0e-17 91.3 98 57.1
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 1.0e-16 90.5 100 53.0
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.0e-16 90.5 101 51.5
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.3e-16 90.1 100 58.0
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.3e-16 90.1 100 53.0
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 1.7e-16 89.7 99 54.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 1.7e-16 89.7 100 58.0
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 1.7e-16 89.7 97 54.6
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 2.3e-16 89.4 98 54.1
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.3e-16 89.4 102 52.0
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 2.3e-16 89.4 100 53.0
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 3.0e-16 89.0 100 56.0
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 3.0e-16 89.0 100 54.0
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 3.9e-16 88.6 97 52.6
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 3.9e-16 88.6 98 55.1
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 6.6e-16 87.8 99 49.5
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 6.6e-16 87.8 99 52.5
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 6.6e-16 87.8 100 52.0
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 1.1e-15 87.0 101 53.5
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.1e-15 87.0 94 54.3
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.1e-15 87.0 112 47.3
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 1.9e-15 86.3 102 52.9
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.5e-15 85.9 95 53.7
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 2.5e-15 85.9 97 52.6
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.3e-15 85.5 102 50.0
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 9.6e-15 84.0 99 51.5
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 1.3e-14 83.6 110 49.1
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.3e-14 83.6 98 52.0
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 1.3e-14 83.6 101 51.5
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.3e-14 83.6 100 48.0
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 1.6e-14 83.2 98 52.0
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 1.6e-14 83.2 98 52.0
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.6e-14 83.2 101 47.5
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.1e-14 82.8 101 50.5
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 3.6e-14 82.0 103 48.5
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 4.8e-14 81.6 99 50.5
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.8e-14 81.6 99 48.5
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 4.8e-14 81.6 102 50.0
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 6.2e-14 81.3 100 52.0
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 8.1e-14 80.9 97 50.5
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.1e-13 80.5 107 48.6
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.1e-13 80.5 99 47.5
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 1.4e-13 80.1 101 49.5
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 2.4e-13 79.3 99 49.5
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 3.1e-13 79.0 98 51.0
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 4.0e-13 78.6 98 46.9
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 6.9e-13 77.8 99 43.4
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 5.8e-12 74.7 63 60.3
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 7.6e-12 74.3 99 48.5
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 2.2e-11 72.8 98 48.0
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 6.4e-11 71.2 66 54.5
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.4e-10 70.1 98 44.9
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 3.2e-10 68.9 114 39.5
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 5.4e-10 68.2 100 43.0
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 6.0e-09 64.7 100 44.0
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 7.8e-09 64.3 70 50.0
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 3.0e-08 62.4 46 67.4
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 3.3e-07 58.9 52 50.0
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 4.3e-07 58.5 66 48.5
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 7.3e-07 57.8 64 51.6


User provided reference genes

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