Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0198 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.1e-56 222.2 121 100.0
TAR636G1048 Trochodendron aralioides HOM05D002652 ORTHO05D002739 4.0e-39 164.9 153 66.0
TAR636G2313 Trochodendron aralioides HOM05D002652 ORTHO05D002739 9.8e-30 133.7 135 54.1
TAR636G3443 Trochodendron aralioides HOM05D002652 ORTHO05D002739 9.8e-30 133.7 154 53.9
TAR636G2060 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.2e-21 105.9 150 49.3
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 2.3e-18 95.9 154 38.3
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.0e-18 95.5 155 37.4
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 5.0e-18 94.7 155 37.4
Atru.chr4.1903 Acer truncatum HOM05D002652 ORTHO05D002739 6.6e-18 94.4 146 43.8
Rhsim02G0046900 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.6e-17 91.3 145 37.2
vmacro15484 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 4.7e-16 88.2 143 43.4
RhsimUnG0058300 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.4e-15 86.7 140 35.7
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 3.1e-15 85.5 155 35.5
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.1e-15 85.5 155 35.5
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 4.0e-15 85.1 144 33.3
Prupe.4G134500 Prunus persica HOM05D002652 ORTHO05D002739 5.2e-15 84.7 145 37.2
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 6.8e-15 84.3 155 42.6
QL08p018841 Quercus lobata HOM05D002652 ORTHO05D002739 8.9e-15 84.0 146 32.9
TAR636G0960 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.2e-14 83.6 58 69.0
QL06p021327 Quercus lobata HOM05D002652 ORTHO05D002739 1.5e-14 83.2 146 32.2
RcHm_v2.0_Chr4g0395801 Rosa chinensis HOM05D002652 ORTHO05D002739 3.4e-14 82.0 155 41.3
FAN25G0267 Fragaria x ananassa HOM05D002652 ORTHO05D002739 4.4e-14 81.6 145 40.7
COL.COLO4_15908 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.3e-13 80.1 131 35.1
vmacro15483 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 1.7e-13 79.7 144 32.6
Rhsim02G0045000 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.9e-13 79.0 111 37.8
Cfa014794 Carpinus fangiana HOM05D002652 ORTHO05D002739 3.7e-13 78.6 147 32.7
FvH4_4g04990 Fragaria vesca HOM05D002652 ORTHO05D002739 3.7e-13 78.6 162 32.7
RcHm_v2.0_Chr5g0024661 Rosa chinensis HOM05D002652 ORTHO05D002739 3.7e-13 78.6 145 33.8
Rhsim02G0047200 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.9e-13 78.2 111 37.8
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 6.4e-13 77.8 146 33.6
Nn1g00655 Nelumbo nucifera HOM05D002652 ORTHO05D002739 6.4e-13 77.8 155 31.0
Nn1g00658 Nelumbo nucifera HOM05D002652 ORTHO05D002739 6.4e-13 77.8 155 31.0
Nn1g00660 Nelumbo nucifera HOM05D002652 ORTHO05D002739 6.4e-13 77.8 150 31.3
Haze_25448 Corylus avellana HOM05D002652 ORTHO05D002739 8.3e-13 77.4 142 35.9
Nn2g14922 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.4e-12 76.6 144 38.2
THA.LOC104821630 Tarenaya hassleriana HOM05D002652 ORTHO05D002739 1.4e-12 76.6 149 32.2
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 4.1e-12 75.1 149 32.2
FAN12G4037 Fragaria x ananassa HOM05D002652 ORTHO05D002739 4.1e-12 75.1 143 35.0
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 4.1e-12 75.1 160 32.5
CiPaw.01G177100 Carya illinoinensis HOM05D002652 ORTHO05D002739 5.4e-12 74.7 146 31.5
Actinidia11376 Actinidia chinensis HOM05D002652 ORTHO05D002739 7.1e-12 74.3 111 34.2
ECA247G3161 Erigeron canadensis HOM05D002652 ORTHO05D002739 9.2e-12 73.9 150 32.0
FvH4_3g15020 Fragaria vesca HOM05D002652 ORTHO05D002739 1.2e-11 73.6 145 35.2
AL9U10120 Arabidopsis lyrata HOM05D002652 ORTHO05D002739 1.6e-11 73.2 147 39.5
FvH4_4g04860 Fragaria vesca HOM05D002652 ORTHO05D002739 1.6e-11 73.2 143 32.9
Potri.010G191400 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.6e-11 73.2 146 32.2
AT4G13440 Arabidopsis thaliana HOM05D002652 ORTHO05D002739 2.7e-11 72.4 147 39.5
RhsimUnG0058100 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.5e-11 72.0 145 31.0
RcHm_v2.0_Chr4g0395461 Rosa chinensis HOM05D002652 ORTHO05D002739 4.6e-11 71.6 145 31.7
Actinidia39935 Actinidia chinensis HOM05D002652 ORTHO05D002739 6.0e-11 71.2 108 36.1
QL09p048820 Quercus lobata HOM05D002652 ORTHO05D002739 7.8e-11 70.9 151 39.7
RcHm_v2.0_Chr4g0395571 Rosa chinensis HOM05D002652 ORTHO05D002739 7.8e-11 70.9 143 31.5
Carub.0007s2911 Capsella rubella HOM05D002652 ORTHO05D002739 1.3e-10 70.1 147 31.3
COL.COLO4_15909 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.3e-10 70.1 153 29.4
QL06p021274 Quercus lobata HOM05D002652 ORTHO05D002739 1.3e-10 70.1 148 31.1
QL09p048410 Quercus lobata HOM05D002652 ORTHO05D002739 1.3e-10 70.1 151 37.7
Cpa.g.sc8968.1 Carica papaya HOM05D002652 ORTHO05D002739 1.7e-10 69.7 146 30.8
Dinv29797 Davidia involucrata HOM05D002652 ORTHO05D002739 1.7e-10 69.7 143 30.8
SalBow2G1631 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.7e-10 69.7 149 32.9
FvH4_4g04900 Fragaria vesca HOM05D002652 ORTHO05D002739 2.3e-10 69.3 145 31.0
Rhsim02G0044400 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.3e-10 69.3 141 29.1
Rhsim02G0046500 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.3e-10 69.3 141 29.1
COL.COLO4_15901 Corchorus olitorius HOM05D002652 ORTHO05D002739 3.0e-10 68.9 151 27.8
Haze_11472 Corylus avellana HOM05D002652 ORTHO05D002739 3.0e-10 68.9 150 31.3
Oeu020135.1 Olea europaea HOM05D002652 ORTHO05D002739 3.0e-10 68.9 145 32.4
BcaB07g30971 Brassica carinata HOM05D002652 ORTHO05D002739 3.9e-10 68.6 154 31.8
A09p20860 Brassica napus HOM05D002652 ORTHO05D002739 3.9e-10 68.6 154 30.5
BraA09t37688Z Brassica rapa HOM05D002652 ORTHO05D002739 3.9e-10 68.6 148 31.1
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 3.9e-10 68.6 152 32.9
SalBow3G3644 Salvia bowleyana HOM05D002652 ORTHO05D002739 3.9e-10 68.6 144 30.6
CARHR219080 Cardamine hirsuta HOM05D002652 ORTHO05D002739 6.6e-10 67.8 147 31.3
Aa31LG9G4240 Aethionema arabicum HOM05D002652 ORTHO05D002739 8.6e-10 67.4 147 29.3
FvH4_4g04850 Fragaria vesca HOM05D002652 ORTHO05D002739 8.6e-10 67.4 151 29.1
FAN12G2048 Fragaria x ananassa HOM05D002652 ORTHO05D002739 8.6e-10 67.4 151 29.1
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 8.6e-10 67.4 158 28.5
Rhsim02G0046300 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.1e-09 67.0 141 36.2
FvH4_3g15000 Fragaria vesca HOM05D002652 ORTHO05D002739 1.5e-09 66.6 166 30.1
FAN21G1568 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.5e-09 66.6 166 30.1
MSTRG.4179 Avicennia marina HOM05D002652 ORTHO05D002739 1.9e-09 66.2 149 37.6
BcaC04g21865 Brassica carinata HOM05D002652 ORTHO05D002739 1.9e-09 66.2 148 30.4
C09p26400 Brassica napus HOM05D002652 ORTHO05D002739 1.9e-09 66.2 148 30.4
BolC9t55542H Brassica oleracea HOM05D002652 ORTHO05D002739 1.9e-09 66.2 148 30.4
Haze_11422 Corylus avellana HOM05D001324 ORTHO05D001220 1.9e-09 66.2 144 31.9
RcHm_v2.0_Chr4g0395551 Rosa chinensis HOM05D002652 ORTHO05D002739 1.9e-09 66.2 150 28.7
FAN17G1721 Fragaria x ananassa HOM05D002652 ORTHO05D002739 2.5e-09 65.9 151 35.8
Oeu011205.1 Olea europaea HOM05D002652 ORTHO05D002739 2.5e-09 65.9 139 39.6
Oeu061866.1 Olea europaea HOM05D002652 ORTHO05D002739 2.5e-09 65.9 137 33.6
QL09p048770 Quercus lobata HOM05D002652 ORTHO05D002739 2.5e-09 65.9 150 31.3
FAN11G1518 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.3e-09 65.5 156 29.5
FAN16G2437 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.3e-09 65.5 156 29.5
Hma1.2p1_0565F.1_g179480 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 3.3e-09 65.5 143 36.4
Aa31LG7G1800 Aethionema arabicum HOM05D002652 ORTHO05D002739 5.6e-09 64.7 147 28.6
Hma1.2p1_0042F.1_g025730 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 5.6e-09 64.7 142 30.3
Manes.15G046400 Manihot esculenta HOM05D002652 ORTHO05D002739 5.6e-09 64.7 148 31.8
PGR044G1935 Punica granatum HOM05D002652 ORTHO05D002739 5.6e-09 64.7 51 58.8
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 7.3e-09 64.3 147 30.6
Ciclev10006564m.g Citrus clementina HOM05D002652 ORTHO05D002739 9.5e-09 63.9 151 31.8
Migut.G00567 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.2e-08 63.5 166 35.5
FAN17G3082 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.2e-08 63.5 146 30.8
Hma1.2p1_0385F.1_g141620 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 1.2e-08 63.5 143 29.4
RcHm_v2.0_Chr4g0395741 Rosa chinensis HOM05D002652 ORTHO05D002739 1.2e-08 63.5 135 38.5
HanXRQChr07g0194071 Helianthus annuus HOM05D002652 ORTHO05D002739 1.6e-08 63.2 146 29.5
SalBow2G2144 Salvia bowleyana HOM05D000062 ORTHO05D000043 1.6e-08 63.2 149 30.9
FAN10G1323 Fragaria x ananassa HOM05D002652 ORTHO05D002739 2.1e-08 62.8 150 26.7
FAN10G2095 Fragaria x ananassa HOM05D002652 ORTHO05D002739 2.1e-08 62.8 150 26.7
FAN12G2993 Fragaria x ananassa HOM05D002652 ORTHO05D002739 2.1e-08 62.8 150 26.7
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.8e-08 62.4 150 30.0
PGR044G0093 Punica granatum HOM05D002652 ORTHO05D002739 2.8e-08 62.4 51 56.9
MD05G1228500 Malus domestica HOM05D002652 ORTHO05D002739 3.6e-08 62.0 79 41.8
RcHm_v2.0_Chr5g0024631 Rosa chinensis HOM05D002652 ORTHO05D002739 3.6e-08 62.0 156 28.2
TAR636G2990 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.6e-08 62.0 37 78.4
CiPaw.02G106000 Carya illinoinensis HOM05D002652 ORTHO05D002739 4.7e-08 61.6 153 28.8
COL.COLO4_15902 Corchorus olitorius HOM05D002652 ORTHO05D002739 4.7e-08 61.6 151 25.8
Rhsim02G0046000 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.7e-08 61.6 149 28.9
Prupe.1G050100 Prunus persica HOM05D002652 ORTHO05D002739 6.2e-08 61.2 52 55.8
RcHm_v2.0_Chr4g0397571 Rosa chinensis HOM05D002652 ORTHO05D002739 6.2e-08 61.2 150 34.0
Aa31LG9G4210 Aethionema arabicum HOM05D002652 ORTHO05D002739 8.1e-08 60.8 147 27.9
ECA238G3361 Erigeron canadensis HOM05D000095 ORTHO05D002739 8.1e-08 60.8 146 35.6
Oeu011207.1 Olea europaea HOM05D002652 ORTHO05D002739 8.1e-08 60.8 134 38.8
Prupe.6G152600 Prunus persica HOM05D002652 ORTHO05D002739 8.1e-08 60.8 55 54.5
Cfa021216 Carpinus fangiana HOM05D002652 ORTHO05D002739 1.1e-07 60.5 117 31.6
Aa31LG9G4200 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.4e-07 60.1 144 25.7
FvH4_4g04740 Fragaria vesca HOM05D002652 ORTHO05D002739 1.4e-07 60.1 149 26.8
Potri.019G027440 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.4e-07 60.1 146 27.4
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.8e-07 59.7 151 25.8
Potri.T121000 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.8e-07 59.7 146 26.0
Migut.N00887 Erythranthe guttata HOM05D002652 ORTHO05D002739 2.3e-07 59.3 144 26.4
Manes.03G158000 Manihot esculenta HOM05D002652 ORTHO05D002739 2.3e-07 59.3 148 31.8
Nn1g09048 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.3e-07 59.3 75 41.3
GSVIVG01027930001 Vitis vinifera HOM05D002652 ORTHO05D002739 2.3e-07 59.3 139 28.8
RhsimUnG0101000 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.1e-07 58.9 117 29.9
Migut.N00305 Erythranthe guttata HOM05D002652 ORTHO05D002739 4.0e-07 58.5 143 30.1
Potri.019G026900 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.0e-07 58.5 150 29.3
Potri.019G027100 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.0e-07 58.5 150 29.3
Sabra19G0038900 Salix brachista HOM05D002652 ORTHO05D002739 4.0e-07 58.5 147 26.5
Lsat_1_v5_gn_2_105441 Lactuca sativa HOM05D002652 ORTHO05D002739 5.2e-07 58.2 147 38.8
Nn1g00661 Nelumbo nucifera HOM05D002652 ORTHO05D002739 5.2e-07 58.2 49 51.0
Potri.019G028800 Populus trichocarpa HOM05D002652 ORTHO05D002739 5.2e-07 58.2 146 29.5
Rhsim02G0045100 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.2e-07 58.2 140 27.9
Rhsim02G0044800 Rhododendron simsii HOM05D002652 ORTHO05D002739 6.8e-07 57.8 111 31.5
Nn1g08811 Nelumbo nucifera HOM05D002652 ORTHO05D002739 8.9e-07 57.4 135 29.6
CSS0031417 Camellia sinensis var. sinensis HOM05D002652 ORTHO05D002739 1.2e-06 57.0 144 32.6
Aa31LG7G1660 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.0e-06 56.2 147 30.6
Potri.019G027000 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.0e-06 56.2 150 32.7
QL09p048859 Quercus lobata HOM05D002652 ORTHO05D002739 2.0e-06 56.2 145 28.3
Actinidia11377 Actinidia chinensis HOM05D002652 ORTHO05D002739 2.6e-06 55.8 145 26.9
Migut.N00886 Erythranthe guttata HOM05D002652 ORTHO05D002739 2.6e-06 55.8 141 27.0
Potri.019G026740 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.6e-06 55.8 145 31.0
Ciclev10005927m.g Citrus clementina HOM05D002652 ORTHO05D002739 3.4e-06 55.5 153 27.5
Potri.T121200 Populus trichocarpa HOM05D002652 ORTHO05D002739 3.4e-06 55.5 146 24.7
Potri.T121301 Populus trichocarpa HOM05D002652 ORTHO05D002739 3.4e-06 55.5 146 24.7
Migut.H01091 Erythranthe guttata HOM05D002652 ORTHO05D002739 4.4e-06 55.1 91 30.8
MSTRG.4186 Avicennia marina HOM05D002652 ORTHO05D002739 5.8e-06 54.7 144 33.3
Duzib151G0998 Durio zibethinus HOM05D002652 ORTHO05D002739 5.8e-06 54.7 58 44.8
RhsimUnG0195300 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.8e-06 54.7 149 28.9
Oeu059391.1 Olea europaea HOM05D002652 ORTHO05D002739 7.6e-06 54.3 144 27.1
Potri.019G026820 Populus trichocarpa HOM05D002652 ORTHO05D002739 7.6e-06 54.3 145 25.5
Potri.019G029000 Populus trichocarpa HOM05D002652 ORTHO05D002739 7.6e-06 54.3 146 26.7
Aa31LG7G1790 Aethionema arabicum HOM05D002652 ORTHO05D002739 9.9e-06 53.9 147 25.2
Duzib151G0943 Durio zibethinus HOM05D002652 ORTHO05D002739 9.9e-06 53.9 58 41.4
Migut.O00454 Erythranthe guttata HOM05D002652 ORTHO05D002739 9.9e-06 53.9 119 29.4
Oeu011211.1 Olea europaea HOM05D002652 ORTHO05D002739 9.9e-06 53.9 141 34.8


User provided reference genes

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