Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 3.2e-69 265.0 138 100.0
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.6e-68 262.7 138 99.3
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 4.0e-43 178.3 138 69.6
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 8.8e-43 177.2 142 71.1
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.2e-42 176.8 142 71.8
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.2e-42 176.8 142 70.4
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 2.0e-42 176.0 139 69.1
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 6.3e-41 171.0 138 69.6
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 6.3e-41 171.0 138 68.1
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 6.3e-41 171.0 138 68.1
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 1.8e-40 169.5 142 66.9
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 2.4e-40 169.1 145 68.3
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 2.4e-40 169.1 138 66.7
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 4.1e-40 168.3 147 66.7
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 5.4e-40 167.9 138 67.4
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.6e-39 166.4 143 65.7
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.6e-39 166.4 138 64.5
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 2.0e-39 166.0 109 78.0
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 3.5e-39 165.2 142 66.2
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 3.5e-39 165.2 138 65.9
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.5e-39 165.2 138 65.9
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 4.5e-39 164.9 141 66.0
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 4.5e-39 164.9 138 65.9
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 5.9e-39 164.5 140 67.1
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 7.7e-39 164.1 139 64.7
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 7.7e-39 164.1 137 65.7
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 1.0e-38 163.7 138 65.9
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 1.3e-38 163.3 138 68.8
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.7e-38 162.9 138 65.9
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.7e-38 162.9 138 63.0
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 2.2e-38 162.5 104 76.9
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.2e-38 162.5 138 65.9
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.2e-38 162.5 139 64.7
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.2e-38 162.5 140 67.9
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 2.2e-38 162.5 138 66.7
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 3.8e-38 161.8 139 64.0
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 3.8e-38 161.8 126 66.7
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 3.8e-38 161.8 146 63.7
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 3.8e-38 161.8 138 67.4
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 5.0e-38 161.4 117 73.5
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 5.0e-38 161.4 139 66.9
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 5.0e-38 161.4 138 65.2
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 8.5e-38 160.6 137 64.2
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 1.5e-37 159.8 104 78.8
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 1.9e-37 159.5 91 86.8
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 1.9e-37 159.5 138 65.9
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.9e-37 159.5 144 63.9
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 3.2e-37 158.7 111 75.7
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 4.2e-37 158.3 139 66.9
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 4.2e-37 158.3 144 62.5
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 4.2e-37 158.3 139 66.9
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 5.5e-37 157.9 140 62.1
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 5.5e-37 157.9 142 62.7
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 9.4e-37 157.1 143 65.7
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 9.4e-37 157.1 91 85.7
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 9.4e-37 157.1 138 64.5
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 1.2e-36 156.8 141 66.0
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 1.6e-36 156.4 138 63.8
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.6e-36 156.4 121 70.2
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 1.6e-36 156.4 91 83.5
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 2.1e-36 156.0 138 65.2
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 2.7e-36 155.6 159 58.5
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 3.6e-36 155.2 138 63.8
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 4.7e-36 154.8 141 61.7
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 4.7e-36 154.8 91 82.4
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 6.1e-36 154.5 138 63.0
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 8.0e-36 154.1 99 76.8
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 2.3e-35 152.5 138 63.8
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 5.2e-35 151.4 140 62.1
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 6.8e-35 151.0 90 82.2
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 6.8e-35 151.0 143 61.5
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 8.8e-35 150.6 136 58.1
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 1.2e-34 150.2 91 81.3
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 1.2e-34 150.2 91 81.3
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 1.2e-34 150.2 91 81.3
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 1.2e-34 150.2 91 81.3
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.5e-34 149.8 118 66.9
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 1.5e-34 149.8 139 63.3
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.5e-34 149.8 119 67.2
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 2.0e-34 149.4 144 57.6
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 2.0e-34 149.4 116 69.0
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 3.4e-34 148.7 92 78.3
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 5.7e-34 147.9 130 64.6
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.3e-33 146.7 82 86.6
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 1.7e-33 146.4 136 59.6
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 2.2e-33 146.0 84 81.0
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 2.8e-33 145.6 104 71.2
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 6.3e-33 144.4 138 58.7
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 8.3e-33 144.1 139 59.0
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 8.3e-33 144.1 82 84.1
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.1e-32 143.7 138 53.6
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 1.1e-32 143.7 132 60.6
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 1.4e-32 143.3 83 84.3
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.4e-32 142.5 137 56.9
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 5.4e-32 141.4 137 59.9
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 7.0e-32 141.0 83 83.1
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 2.7e-31 139.0 114 62.3
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.0e-30 137.1 88 77.3
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.3e-30 136.0 132 59.8
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 1.1e-29 133.7 88 70.5
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 1.6e-28 129.8 85 76.5
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.2e-26 123.6 96 65.6
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 7.8e-23 110.9 132 54.5
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 8.3e-17 90.9 46 89.1
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 7.0e-16 87.8 84 57.1
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 1.1e-08 63.9 92 42.4
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 1.7e-06 56.6 111 42.3


User provided reference genes

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