Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 3.4e-74 281.6 142 100.0
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 1.5e-45 186.4 140 67.1
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 4.5e-42 174.9 141 63.8
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 3.2e-40 168.7 141 64.5
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 3.3e-37 158.7 142 60.6
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 9.7e-37 157.1 141 61.7
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 9.7e-37 157.1 142 57.0
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 6.3e-36 154.5 139 56.1
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 1.1e-35 153.7 131 59.5
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 1.8e-35 152.9 139 58.3
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.8e-35 152.9 142 57.7
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 5.3e-35 151.4 136 55.9
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 7.0e-35 151.0 133 62.4
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 9.1e-35 150.6 142 58.5
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.2e-34 150.2 142 56.3
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.2e-34 150.2 142 55.6
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 3.5e-34 148.7 144 54.9
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.5e-34 148.3 141 54.6
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 4.5e-34 148.3 141 54.6
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 2.2e-33 146.0 113 67.3
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 2.9e-33 145.6 145 58.6
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 2.9e-33 145.6 144 59.0
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 3.8e-33 145.2 131 57.3
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 8.5e-33 144.1 132 59.8
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.1e-32 143.7 114 67.5
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.5e-32 143.3 141 53.2
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 5.5e-32 141.4 132 59.1
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 7.2e-32 141.0 136 58.1
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 9.4e-32 140.6 146 54.8
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 2.1e-31 139.4 119 61.3
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 2.7e-31 139.0 129 58.9
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 2.7e-31 139.0 129 61.2
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 3.6e-31 138.7 146 58.2
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.7e-31 138.3 139 55.4
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 4.7e-31 138.3 144 52.1
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 6.1e-31 137.9 144 48.6
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 1.0e-30 137.1 135 58.5
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 2.3e-30 136.0 143 55.2
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 3.0e-30 135.6 133 56.4
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 6.7e-30 134.4 120 61.7
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.6e-29 132.5 131 54.2
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 3.3e-29 132.1 129 57.4
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 5.7e-29 131.3 133 53.4
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.3e-28 130.2 142 51.4
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.2e-28 129.4 109 60.6
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.8e-28 129.0 69 87.0
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 4.8e-28 128.3 135 54.1
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.8e-28 128.3 135 54.1
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 6.3e-28 127.9 69 87.0
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 6.3e-28 127.9 139 53.2
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 9.1e-27 124.0 128 54.7
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 1.2e-26 123.6 138 52.2
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 5.9e-26 121.3 132 50.8
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 5.9e-26 121.3 68 83.8
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 5.9e-26 121.3 123 55.3
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 7.7e-26 120.9 135 52.6
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 2.9e-25 119.0 113 53.1
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 5.0e-25 118.2 113 53.1
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 8.5e-25 117.5 69 81.2
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 1.9e-24 116.3 141 46.8
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 3.2e-24 115.5 132 49.2
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 9.4e-24 114.0 142 45.8
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.7e-23 112.5 122 54.9
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 2.7e-23 112.5 123 52.8
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 4.7e-23 111.7 135 47.4
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 1.0e-22 110.5 137 43.8
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.0e-22 110.5 64 85.9
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 4.0e-22 108.6 66 81.8
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 6.8e-22 107.8 69 73.9
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 2.0e-21 106.3 115 53.9
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 3.4e-21 105.5 124 49.2
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 4.4e-21 105.1 82 67.1
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 4.4e-21 105.1 82 65.9
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 7.5e-21 104.4 69 75.4
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 7.5e-21 104.4 69 75.4
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 7.5e-21 104.4 74 70.3
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 9.8e-21 104.0 68 76.5
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 2.2e-20 102.8 78 67.9
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 2.8e-20 102.4 74 64.9
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 3.7e-20 102.1 138 47.1
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 3.7e-20 102.1 116 49.1
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 4.8e-20 101.7 69 72.5
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 6.3e-20 101.3 65 72.3
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 6.3e-20 101.3 125 48.8
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 8.3e-20 100.9 67 73.1
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 8.3e-20 100.9 69 72.5
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 1.1e-19 100.5 123 48.8
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 1.8e-19 99.8 104 56.7
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 1.8e-19 99.8 69 72.5
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 9.1e-19 97.4 84 56.0
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.6e-18 96.7 120 47.5
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.6e-18 96.7 83 57.8
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 2.7e-18 95.9 125 44.8
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 4.5e-18 95.1 125 45.6
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 4.5e-18 95.1 116 45.7
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 4.5e-18 95.1 116 45.7
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 5.0e-17 91.7 87 56.3
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 6.5e-17 91.3 64 67.2
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 6.5e-17 91.3 87 57.5
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 4.2e-16 88.6 102 50.0
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 4.2e-16 88.6 64 65.6
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.1e-15 86.3 66 63.6
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.1e-15 86.3 66 63.6
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.8e-14 83.2 68 66.2
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.2e-13 80.5 55 76.4
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.3e-12 77.0 98 44.9
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 6.3e-12 74.7 53 64.2
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.6e-07 60.1 90 42.2
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.6e-07 60.1 90 42.2


User provided reference genes

Program Settings